Hcon016515.1
Basic Information
- Insect
- Hirtodrosophila confusa
- Gene Symbol
- Csrnp3
- Assembly
- GCA_035043065.1
- Location
- JAWNNI010000212.1:3003995-3006747[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.067 1.7e+03 -0.8 1.0 81 114 48 66 17 105 0.49 2 3 0.28 7.1e+03 -2.9 0.1 27 65 235 271 232 296 0.56 3 3 1.6e-98 4e-94 315.1 9.1 2 218 301 519 300 519 0.89
Sequence Information
- Coding Sequence
- ATGAAGAGCATGTTCCGTCCGATAAAGAAGATTATCACGTACATACAGAAAAATGCGACCAACGGGACAATGTTTGGTAGCACAAATAGCATAAACAATGCAGACAATGAAGCGGCCAGCAGCAGTGTTGGGCTGGAAAAGGAAGAGCGAGATGAACGCGAGgacgagcagcagctggagcaggaacaggagcTCGAATTGATGCCACAGACCGACGATGACGACATTGAACGtcaaataaaaacatcaaTCATTGATGCCAGCAAGGTGCATGCAGCTAAGGCTAAAATGGGGCTGCCAATCCAACTGCAGCTGGACGATGAGCTGGCGGATTTCGCAGACGAGCCGTTGGCAGAGGGCATGCGCCAGGTGGTGGACGAGGAGGACGATGAGGAGCTGGATGAGCAGTTTCTGGAGCTGGACAATTTTCCCAACAATGAGATTATTGTGCTGAGCGAAAATGAGCTCAATTCTTCGTTGGCCTCGGATAACATATCCGAGGATCCGCTGGCCATTGATGAGTTTACGCAGCCGCTGGCACGCGATGAGGATAACGAGGAGCCGGAGGAGGCGGAACCGGAGGTCGATACCAGCACTGATTTGCTTTGGTTGAAGCTGGAGACGCCAGTCCCTGTTACCCAAGCCGCACCCGCCACAACAGCCAAGTTGACGCCCACAAAGACCAAAGAGGAGGAGCTGCGCAGCGATGGTGGCTCCGATTCGGGACTGGGCAGCGAAAATGATCGAcacaatgcaacaacaatagcaacaaacaCGATGAAGCAACCCTTGCGCTCCAATTTGAAGCGCCGGCTAGACGACGATGCCATGGAGCTTGCTTTGGTGACCGacatgagcagcagcagctccaattGCTGCTCCAGCACGCCACAGAAACGCCCGAAGCGTTCCATTAACTTTGATACCGTCAAGGTTTATTACTTTCCCCGCCAACAGGGCTTTGGCTGTGTGCCCACCGCCGGCGGCTGTACGTTGGGCATGGGCGCACGGCACGTTGCCTTCAAGACCATGACGCTGGCGGAGCATGCCGCCGAGCTGCGTCGCGCTCATCGCAGTCAAAATCaggaacaacagcagcagctgcagataCGTTCCAGTGTCAGCGGCgggggcggcggcggcggtgtcGGTTCCAGCAGTGACGAAAGTGAGGAATCTGAAGAGGATTATCTCAGCGAGGGCAGCGGCTCTGAGGCCGATGATAGTTCCAATGGCTTTCTGCAGCCGGTTACCCCGAAGCAGCGTCGTGCGCTCCTAAAGGCCGCCGGCGTGCGCAAAATAGATGCCAACGAGAAAATCGATTGCCGCGACATACGCAACTCGCGCGAGGTGTGCGGCTGCTCCTGCCGCGAATTCTGCGATCCGGAGACCTGCGCCTGCAGCCAGGCGGGCATCAAATGCCAGGTGGATCGCGCCATGTTTCCCTGCGGCTGTACACGCGAGGCCTGCGGCAATACCGTTGGACGCGTCGAGTTCAATCCTACGCGCGTGCGGACCCACTACATACACACAATCATGCGGCTGGACATGGAGCAGCGACAGAGCCAGGGACCGCCCTCGggcaataacagcagcagcttggTCTACAGCTCCacaggcggcagcagcagcggtggcGTTGCAGGCGTCGTCTCAAACTCTACTGCCGCCGCATCGCACTGCTACTTCATGCAGTCGCAGTCGAACTACAGCTCCGGCTATGCCTCACCAGCCTACACGCCCGAGACGAGCGTTAGCTActaccagcaacaacagacgCCTCAGGCGGCAGGTGCCTCACCCGCCACAGCGGTCAACGGCAGCACGGCTGCTCAGCAGTCTAGCTATACCGCCGGCTATCCGCAACTGGACAGCCTCGACTCGGGCCTCTTTACCAGCGGCACCAATGCCACGCCCTCCTATGGTGAACTGCTCACGCCTACCTTTCATCAGACCCTTGGCTATGGCAGCGCCCAGCTCAACTATACCACCTATCAGCAGGCGACGCCGTCGTCCAGTGGTGCTGGTGGTTACAGCTCTTGTGCTGTGCCATCGGTGCCGCCATTTGGAAATGCGACAACCACGGCATCAAATGCAACCCAATATCAGCACGCGAATGCATTGGAAACCACCGCCGCTTCGATgaatgccagcagcagcatatcTGTGGTAACGGCCAGCGGCTGCTCCACTGGGCTAGCCCGGCACAGTGGTGGCAGTGTTCCAGGCGAATTCATAAGCTTAAGCACGTCCATGAACAGCTCGTCGCGTCTCTCCCAAATAAATGACCTGTTGCAGCACAACCGCAGCACAACCGACGCTTTGGTGGCCGTGTCCGAGGGCTATTCCGCTGTGCGTAGCAGCAGCACAAGCACCGCCACCACTACCACCATAGACTCCATTGACACGCCGCCCATTGTGGAGGACACACAGCGCAGCTGCATGACCTTCGAGGAGCTGCCACCGCCGCTTATCAATCCTGCGCCCATTGTGGCCGTTGTGGAGCAGCCGCACAAGCAGCTGCTGGCAGTAATCAACGCACCGCAGCCGCGCCAGCCGCTGGATGCGACCGCAGCCTGCAGCCTGGCTGAATCCTTggccggcagcagcaactaa
- Protein Sequence
- MKSMFRPIKKIITYIQKNATNGTMFGSTNSINNADNEAASSSVGLEKEERDEREDEQQLEQEQELELMPQTDDDDIERQIKTSIIDASKVHAAKAKMGLPIQLQLDDELADFADEPLAEGMRQVVDEEDDEELDEQFLELDNFPNNEIIVLSENELNSSLASDNISEDPLAIDEFTQPLARDEDNEEPEEAEPEVDTSTDLLWLKLETPVPVTQAAPATTAKLTPTKTKEEELRSDGGSDSGLGSENDRHNATTIATNTMKQPLRSNLKRRLDDDAMELALVTDMSSSSSNCCSSTPQKRPKRSINFDTVKVYYFPRQQGFGCVPTAGGCTLGMGARHVAFKTMTLAEHAAELRRAHRSQNQEQQQQLQIRSSVSGGGGGGGVGSSSDESEESEEDYLSEGSGSEADDSSNGFLQPVTPKQRRALLKAAGVRKIDANEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTIMRLDMEQRQSQGPPSGNNSSSLVYSSTGGSSSGGVAGVVSNSTAAASHCYFMQSQSNYSSGYASPAYTPETSVSYYQQQQTPQAAGASPATAVNGSTAAQQSSYTAGYPQLDSLDSGLFTSGTNATPSYGELLTPTFHQTLGYGSAQLNYTTYQQATPSSSGAGGYSSCAVPSVPPFGNATTTASNATQYQHANALETTAASMNASSSISVVTASGCSTGLARHSGGSVPGEFISLSTSMNSSSRLSQINDLLQHNRSTTDALVAVSEGYSAVRSSSTSTATTTTIDSIDTPPIVEDTQRSCMTFEELPPPLINPAPIVAVVEQPHKQLLAVINAPQPRQPLDATAACSLAESLAGSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00805170;
- 90% Identity
- iTF_00805170;
- 80% Identity
- -