Hcon010296.1
Basic Information
- Insect
- Hirtodrosophila confusa
- Gene Symbol
- lov
- Assembly
- GCA_035043065.1
- Location
- JAWNNI010000160.1:3727917-3728892[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-19 5.1e-16 58.6 0.0 1 44 45 88 45 89 0.96
Sequence Information
- Coding Sequence
- ATGGGCCACAAGATTGAAACATTAGCAGATGGTCGCGATGCGATAACCTCCTCGCTGCGGCTCTGGAGGGACTCAGTGCCACGCCCCAAAGGACAACACTCGGCGCCACGCGGCGGCCCGCCACGCTCCTGGACCAACACGGAGCTAACGGAGGCGCTGCAGCATGTGTGGAACAAGAAGATGACCACCTCGCAGGCATCGCGCATCTTTGGCATACCCTACAACTCGCTGCTCATGTATGTGCGCGGCAAGTACGGCAAGagcttgaagctagagcagcTGCGCAAGGACTGCATCAGCGGGCCACCACTTGAGATGCTGCAGATGGGCATcagtggcggcggcggcggcggctccAAGAGCGAGAAGAACAAGGAGCgcaaggacaaggacaaggacaagaACGCGTCTGGCTCGAATTCAAGCTCAGGCGCCAATAATGGCGCTTCTGGCAACAACAGCGGTGGCGGACCACAGTCTCTGCCACATCCCAGCGATATGGGGCCACTGGGTCCACTCGACTTGGAGCTGGGGCTGCCGCTGGGGCCGCCAGCCGGTCCGCGCAGCGGCAGCTCCGAGCCCGACCTGCTGGGCGGACCCAACGCGCTCTTCAACCCCTTCAATCCGCAGGGCTTCTATCCGGACTTTGCTGGCGGCTTTCCCGGCCTGCCGCTCAGCATGCTGAACCTGCTGCCGCCGGCGGAGCGCCACCACGCGGCGGTGGCCATGCACCACTTGGGCGTCAGCATGGATGAGGACTGCAAGTCGGTGGGCTCCAAGCAGTCCTCCTCGCTGGACGACGACTTTGCAGCCGCCGGCCTGCCGCTCGCCCTGGAGCATCGTCGCCACGGCGAGCTGGCCAGCAATGGAGCGCCGCTGGCCCAGGCGAACGGGGCGGGGCAGGATTGA
- Protein Sequence
- MGHKIETLADGRDAITSSLRLWRDSVPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPLEMLQMGISGGGGGGSKSEKNKERKDKDKDKNASGSNSSSGANNGASGNNSGGGPQSLPHPSDMGPLGPLDLELGLPLGPPAGPRSGSSEPDLLGGPNALFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAVAMHHLGVSMDEDCKSVGSKQSSSLDDDFAAAGLPLALEHRRHGELASNGAPLAQANGAGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00805105;
- 90% Identity
- iTF_00805105;
- 80% Identity
- -