Basic Information

Insect: Hirtodrosophila confusa
Gene Symbol: JARID2
Assembly: GCA_035043065.1
Location: JAWNNI010000213.1:15314476-15322467[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7.3e-22 1.8e-18 67.1 0.0 6 89 1861 1942 1856 1942 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7.3e-22	1.8e-18	67.1	0.0	6	89	1861	1942	1856	1942	0.92

Sequence Information

Coding Sequence: atggTTGTCTCAAAAGACAACAAGCGCCGTCGTAAGGAAACGGAGACACCGCCAACGTCAtcgtcagcagcagctgcggcggcggcggtatCTGTGGCCGTGGAGTCATCACCCGAGATGCCTAAAAGAACGAAGGTGCAAGCGCAGCGTAAATTCGCCCAAGGCCAAAGCGCGCCCAGCTCAGCGAACGCATacagcgctgccagcgtcgcagcagcagcagcagcggcggcggcagcagcatcgTCATCTGGCCCGAGCACATCCAGCGAGAGTCTTCAACCGCCTATTGAGATACTACCCAACAAGTGTCCCGCACCGCAGGATTTCTTAACGTTTCTCTGCTTTCGCGGCACATCCGCACTGCCCGCCCACTTGGACTATCTGAATCAGGGCAAGTCCAAGGCAAATGAGTCGCTGCcgccgagcagcagcagcgacaacaacaacaagaagaaaaacaacagcagcagcaaaaagaaacgCGGCCGACCAgccaaagcagcaacaactggcAAAGCAACAGacgagcaacagcagcagtcgcagcagcgaCAGTTGCCAGCAGCAGATAAAGTTGAAGCAGCTGCACCACCGCCGCCCACTGTGCTTCTAGCGGGCGCAGTGCGCAAACGCGCCGAGGTGATAACTGAGGGCAATAGACGGGGCGCGCGACGCGGGGAGGCACTGAAACGACGCTCAAATCGTGGCAGCAACAAGGAGAAGGATGAAGACCAACATCAGCTGGATAATAAAGCTGAAGCTGAGCAGCAGGAAGAGGATGAGGAAGATGACGATGATGAATTCTTTTCAGCTCACGATGCCAGCTCGCGTAATGGCGGTGCTGAAGAGACACTTTCCAAGTTGGAGGCAACAAACCCAAATGTGAAACGTGGGCGTAATCAGGCGGCCAGGAAAGCAGCTGTAGCTGTCTCACCAGCCGTTACAGAAAACAGTGCCAccaaggagaaggagaaggaaaAGGGGCCTGTAAAGCGGATGCGTCAACGTGAATCGcccatttttataccctcgcCAGAATCCTCTGGGCGCATGACGCGACAGCGAGCTTTTTTTGAGCCCGTCAAGGTGGCGCCAAAGCCTGAGAAGGAGCAACAaaaggaggaggaggagctgccagcagcaacagagtCCAAGAAAGCAAAAGACGCaggcaatagcaacagcaataaacagcagcaacagctgctcaTCAAGGAGAAGACAAACTCTAGCATTTATGCCAAAGATGCTgccaagcagcagctggagaatggcgcgacagcaacagctgcagctgctgctgaacaGCAAAAGGGTCTCAATGTATTCGACTTTAGCTCCGATGATGAACAGCCGCTGGCTAAAGCTATCAAGCTGAAAAAGGGGGTTAAAAAGggtgcaacagcaacagctacagcagcagcagcagcaacaacaacagtcaacGCACGTGGGCGTAAATCAGCTGGCGGCGCTGCtaagaaacagcagcagcagcgggagcAGGAGCCTGAGGAGGAGAAAGTTGAAGCGACGCCCCCAACGCCGCCAAGCAAGCCCGAGGAACCGCAGCCCAAAACAAAACGCGGTAAAGCGCTTAAAAAAAAAGCCGAGCAAGAAATTGCAGACAATCAGCAACTGAAAGAACAGCTTGCGCCTCCGTCGCCCAAAAAGccgagcaacagcagcaacaatgcgcGTCCAGCACGACGTCAGGCCCAAGCCAAGGCCAACAAATCGCAGATTCAGCTGGAAAGCGAACGTTCggccagtcccagtcccacgCCCAATCCCAGCACCCAGCGCAGTCAGCGACCGTCGCGTAAGACGAAGGAAGCGGCTGCTATTTACATGGGCATCATTGGGCACAAGCTGCAGCTGGCCGATGATGAGGAGGATGATCTCTCGCTGAGCAGCTTTCCGGACATACCCAATGTCAAGCAAATGGAGAAAATGGAAAAggaaatgaagaaaaatgcAACCGGGAAGAGCCAGCAGACGGAAACAACAGGAGGAGTGAGAAAAAAGTCCCCCAGaccagcggcagcaacagatacagcagcagcaacagttacaccagcagcaacagctgctgctgccgcagaGCAGTCCTCGCCAGAAACGTCAGCGCCTCCGCCGAGACGCGGACGGCCGCCCAAGCAGACAAAAGCGAGCgccacagcagccgcaacaacaagcaagccACAGATTGAGGGCATGCTGGTTAAAAAAGGCGCATTGGCGCTTGCCAAAGCCAAGTccgaacagcaacaaaagcaacagcaacaacaacaacaaaaagttgacTCCGATGCGGAGGaagattttttaattaacGAGGAGCTAAACGAAACAAAGCGCAAGCTGGAAAAGAGTTTTAGCGACTCGGATGATGAGCCGCTGGCCATTAAAGTgccaacggcagcagcagcagcagcatcaacagcagcagcggctgcaacaacaacaacagccaaaggcggcagcagcaaaacGGAaggtgcaacaacaacaacaaaagcagcaactgctgctgcacagGAACCAagcaaaacagcagcagcagcgacagctgcaaaaactacaacagcagcagcagcaaacacaacaacaacaacagtaacaagcTTGAACTGTACGCCGCCcaagccgctgccgctgccgctgccaatgCCTACAACACAATTGACGATGTTGCCGCTTACAGCAAAGCCCACACCATTCTCCATATCGCCGCCTAGCTATGggccagcggcagcagcagcattgaaAACAATGGAAAAGAAATCGCCGGTGCCGACATCAAAGATTCTTAATGTGCCTGCAACATATGCGCTGCCAGGATCTGGCGTGGGCGTGACAACGGCAACAGTGGGCTTTGGCAAGACCACATCGTATTTGCCGCAAGCATCGCCGCATTATCACACGCCGTATGTGCGGCCAGCAACATTTGGTGTCGCGGGCAGCAAGACGCCGCAGCATCCGCAacaggcaacggcaacaatatCGGCGGCAGCAATAGTTACGTCGCCTTTGAAGTATCAAACGCCGCCCACAACTTATCCGCCGCCTATTGAGGCGTATCAGTGTCCCAAAATCAATCCTAATTTTTTAACACCCAAATATGAGCGCAGCAGCGTGTTGCCacgcgccaacaacaacaataacaacaccacCATcagcagtaacagcaacaCGAGCAATAGCAATAATTTTACAGCGCCAACAGCAACGCGTGCCACGCTCAGCACGCTGACCACGCCAGTTGCCGGCAGCGCAGCCACGGCCAAAGCTGCGTTAGCGGCGCCTGCAGTTGCCCAATGTCAAAGTCTCAATCTAAGTCTGACTGTAACGCCACCAGCTGTGGCCTCTACATccgcagcagcggctgcagcagcacaacagcagcaacttccacagccgccgccgcagccACAGTTGTCAGCAGCTCCCGCTGCCGCAGCAGCGCCGGCTGCAAGCAATAGCGCCGCTGCAGCTGATCCGCTTAAAGATGAAATTGGCAGCATTTTGGCCCAAGCCACGCTCATGCCCAGCAAAGAGGAATCGGGCAAAATCTTTGGCATTGCCAGCGTTAGTTTGGCGCAAAGTTCCGGCCCGGATAACACGAAATGTACGCTGGGTAAATGCGGTTCCATACACAAGCCCGTGCTGGGTCCTGTGGTGCCCACGGAGAGTTACTTTGGCGATCAGCTGACCAGCAAGGAGCGGCGCAAGGCCAAGGTCAATATGACGCATGAGCAGATACAAAAGTGGCTTATCGAATGCAGCTCGAATCCGGATGAAATCCAAGATGATCTCGATGACGATTATGATGACAGCGGCATGCGGCCACAGCAGGCCCAAACGCCGCCCGGGCCCACGCGCGATGACAAGGAGAGCACCAGTTTCAGCAGCTCCTCAAAGAATACGCGCGGCGAGCTGGGCAAAAGTGAGAGCGCCTGGTCGGCCAAAGGACCTTCGCTAAAGGCCACACCGGTGCTGGTTAgcacagcagcggcagcagccgccAATCGCAAGGAGACAGATACGGAGCCGGATTTGGACTTTGATAAGTGTGTTACGCCTGTGAATCTCACGCAAAAAGCACAGCTAGAGGCATCTGCTAGCGATAGGAAACTTTCTGAGAAGAAgcttaaaaacacaaacagcCTCAAGCAATCAGCCGCAGCGCTgtctgctgcagcagcagcgtctggCAGCAAGcgtggcgctgctgctgctgcggccaGCCCAACAGCACTGCCACCGAGCAAGCAGAAGGCAGGCAACAAGAGGAACGCAGCTGCAACAAAGCTGTCGACGCCGCcacccagcagcagcagcaatacgCCCGCCTCccaaactacaacaacaggagccacagcaacaacatcaacaggaacaggagcaTCGCCAGCCAAGCGCACGCCTGTCTACCACAGTCTGAGCAAAGGCAAAGCACAGACGCAGCTGGACAAcaagcatcaacagcaacaacaacatcaacagcagctgcagcagaacGCAGCAAAGGCGGGAACAACTTCGGTTTATGCTTTTGGCAAGGAGGAGGAGACAACAACGGcacctgttgctgctgctagcAAGGTGACAAATCGTCGTCGTAATGCTGACAACGATTTATCAGCGCCGCCGCCAGCGCTCAGCGAACGTTCGCCAACCAAAAAGCGTGCGGCGGCTaccgcagcagcaactgctgtGCAACTGACGCTCAGTCCCACAGATAAACTGGAGAAGCCcaaggcaacagcagcagcgcgcaaTGCtaagaaacagcaacagcagcagaaacaggcggcagcagcagcaggcgctgATTCAGATGCAGAGGGCGCCACGTTTTATATACCACTGCGACAGGGTGCCAGCGGCGGTGGCGATGGTGGTATACAGGGTGTGGCCGTTAAGCTGGGCCGCGAGGGACCCGATGGGCCCAACCAAAAGGTGGTCATGCAGGCCACGTTGGTAACCAAAGCGCAAATGGACACCAATTCCAAGCCGCTGCAGGACAATGAGCTGATGAAGTCGCTGCTGAATGCGGCAACAACTGGCAACGATGCAACCGCAGCGCCAACTGTTGCCGGCAACAGCTTAAAAGCGAGtacctcagcagcagcagctgctgcagcggcagcagctagCAGTCTTGTGCGAGTTAATTCCAGTTCATCGCTCTTCTCCGGCTCCGCCAAGTCGCgcacagcagcaacggcaacagcggCGGCTGCAACGgctgcggcagcaacaacagctttGGCCAAGAAGTACAAAGATGTTACGCCTATTAAGATGGCAAATAATACGGCATTCCCACGCCACGATGATCCCACGCAAATGGTCGAGGCGCCCATATTCAAGCCCACCGAGAAGGAGTTTGCCGATCCCATTGAATTCATTGAGCGCATCACACCAATTGCCGCAAGATTTGGTATATGCAAGATCATACCGCCGGCTAGCTTTAAGCCAGAGTGTCGCATCTCGGATGAGATGCGTTTCACGGCGTACAATCAGTATGTGCACAAGATGTTGCACCGCTGGGGACCCAGTGCCAAGGAGCTGAGTGCGATTAAAAAGTATTTGGCCACACAAAGCATTGTGATGAATCATGCGCCCTGGATCGGCGGCATGGAGGTGGATCTGCCACGTTTATATCATACGGTACAGGAGCTTGGTGGCCTCAAAGAGGTCATCGAGAAGAAGAAATGGGCGCGTGTCGCTGAAGAGATGTGCATACCAAAGCTGGCACAAGATCGGGTTACCAAATTGGATGACATCTACTGCAAGTATTTGTTGCCCTATGATACGCTCTCGCCGGCGGAGCGCCAGAAGCTCTTCGACGAGGTCGAAGCAGATTGGGCGAAGCGTGAGGCACGGGCGCGTCGCAATGCGGATCGTTTTGTCAATAGCACTGAGAGCGTTTCGAATGAGGAGGATGATGTATCTGAGGATGAAGATGAGGAGTCTGAGGAGGAGATCGATGGCGTGTCCATGGAGTGCATTGTCAAAGGGCGCAGCATGGCGCTCAGTCAGTTTTATCGCATTGCGCGCAACACAATGGCCCTGTGGTTCAAGAGCACTGATCCGACGGTCAACGAAGTAGAGGCGGAATTTTGGCGTCATGTCGCCGTACGCGATagtcatgtgtgtgtgcattccGGCTCGATTGATAGTTCCGGCTGGGGCTATGGTTTTCCCAGTCCAGGTCCCAAGGGCAAGGGTTCCAACTACGCGCGGCATCCCTGGAACCTCAAGGTGCTGACAAACAATGCGGGCTCAGTGCTACGCTCGTTGGGTCCTGTCATGGGCGTAACGGTACCCACGCTGCACGTTGGCATGCTCTTCTCTGCCTGCTGTTGGTATCGTGATCCCCATGGTCTCTCCTGGATTGAGTATCTGCACACGGGCGCCTCGAAACTCTGGTATGGCATACCTGACGATCAGAGCGCCAATTTCCGTTCCGCGCTCACGTCACTGATACCGACGCATTGCCAGAACAAGACCATTTGGTTGCCCTGTGATACGGTGATGGTGCCACCGCACATGCTCACCGACCGCGGCGTCTCACTGTGCCGCATCGAGCAAAAGCCAGGAGAATTCATTGTGGTCTTTCCGCGCGCCTACACCTCCAGCTTGGCCACCGGCTATGTGGTATCCGAGAGCGTTTATTTTGCGACCATGTCGTGGCTGGATTTGGCCAAGGATGACTTCAGAGACATTCATGAGAGCTGTGAGCCGGCCATGTTCTCGCTAGAGCAGCTGCTATTTGCCTTGGGCTACGATCAGCGCGTCAACTCGGACACATTGCAGCAGATGCTGCCCATGCTGAACGAGGTCTGCGAGAAGGAGTCGGCGGCACGCGAACAGCTTAGAGCTGCTGGCGTCACATCCACCGAAAAAGTGCAGGCGGAGAAGGGTCAAAAGGccaaaaagcaacagcagccaccgCACAAATCCATTGAGAGCGAATGCGATCTGTGCCGTGCGAATCTGTACATATCGATGGTGCGCACCGAGGACGGCAACGTCTACTGTCTGCAGCATGCGCTCAAAAATCTCAACAATGGCAACATTCAGGCCAAGCAATGTAAGCTGATTTATGCGTACAACGTGGATGATATTCAGCAGCTTATTCGCCAGCTGCAGGAGAAGATTCAGCACAAGGCGGCCGTTAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPTSSSAAAAAAAVSVAVESSPEMPKRTKVQAQRKFAQGQSAPSSANAYSAASVAAAAAAAAAAASSSGPSTSSESLQPPIEILPNKCPAPQDFLTFLCFRGTSALPAHLDYLNQGKSKANESLPPSSSSDNNNKKKNNSSSKKKRGRPAKAATTGKATDEQQQQSQQRQLPAADKVEAAAPPPPTVLLAGAVRKRAEVITEGNRRGARRGEALKRRSNRGSNKEKDEDQHQLDNKAEAEQQEEDEEDDDDEFFSAHDASSRNGGAEETLSKLEATNPNVKRGRNQAARKAAVAVSPAVTENSATKEKEKEKGPVKRMRQRESPIFIPSPESSGRMTRQRAFFEPVKVAPKPEKEQQKEEEELPAATESKKAKDAGNSNSNKQQQQLLIKEKTNSSIYAKDAAKQQLENGATATAAAAAEQQKGLNVFDFSSDDEQPLAKAIKLKKGVKKGATATATAAAAATTTVNARGRKSAGGAAKKQQQQREQEPEEEKVEATPPTPPSKPEEPQPKTKRGKALKKKAEQEIADNQQLKEQLAPPSPKKPSNSSNNARPARRQAQAKANKSQIQLESERSASPSPTPNPSTQRSQRPSRKTKEAAAIYMGIIGHKLQLADDEEDDLSLSSFPDIPNVKQMEKMEKEMKKNATGKSQQTETTGGVRKKSPRPAAATDTAAATVTPAATAAAAAEQSSPETSAPPPRRGRPPKQTKASATAAATTSKPQIEGMLVKKGALALAKAKSEQQQKQQQQQQQKVDSDAEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPTAAAAAASTAAAAATTTTAKGGSSKTEGATTTTKAATAAAQEPSKTAAAATAAKTTTAAAANTTTTTVTSLNCTPPKPLPLPLPMPTTQLTMLPLTAKPTPFSISPPSYGPAAAAALKTMEKKSPVPTSKILNVPATYALPGSGVGVTTATVGFGKTTSYLPQASPHYHTPYVRPATFGVAGSKTPQHPQQATATISAAAIVTSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSSVLPRANNNNNNTTISSNSNTSNSNNFTAPTATRATLSTLTTPVAGSAATAKAALAAPAVAQCQSLNLSLTVTPPAVASTSAAAAAAAQQQQLPQPPPQPQLSAAPAAAAAPAASNSAAAADPLKDEIGSILAQATLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYFGDQLTSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDYDDSGMRPQQAQTPPGPTRDDKESTSFSSSSKNTRGELGKSESAWSAKGPSLKATPVLVSTAAAAAANRKETDTEPDLDFDKCVTPVNLTQKAQLEASASDRKLSEKKLKNTNSLKQSAAALSAAAAASGSKRGAAAAAASPTALPPSKQKAGNKRNAAATKLSTPPPSSSSNTPASQTTTTGATATTSTGTGASPAKRTPVYHSLSKGKAQTQLDNKHQQQQQHQQQLQQNAAKAGTTSVYAFGKEEETTTAPVAAASKVTNRRRNADNDLSAPPPALSERSPTKKRAAATAAATAVQLTLSPTDKLEKPKATAAARNAKKQQQQQKQAAAAAGADSDAEGATFYIPLRQGASGGGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLQDNELMKSLLNAATTGNDATAAPTVAGNSLKASTSAAAAAAAAAASSLVRVNSSSSLFSGSAKSRTAATATAAAATAAAATTALAKKYKDVTPIKMANNTAFPRHDDPTQMVEAPIFKPTEKEFADPIEFIERITPIAARFGICKIIPPASFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHAPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNSTESVSNEEDDVSEDEDEESEEEIDGVSMECIVKGRSMALSQFYRIARNTMALWFKSTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLQQMLPMLNEVCEKESAAREQLRAAGVTSTEKVQAEKGQKAKKQQQPPHKSIESECDLCRANLYISMVRTEDGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRQLQEKIQHKAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -