Basic Information

Insect: Hirtodrosophila alboralis
Gene Symbol: -
Assembly: GCA_035043045.1
Location: JAWNNH010000077.1:2934807-2940728[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.072 5 7.9 0.4 1 23 502 524 502 524 0.96

2 7 0.35 24 5.8 0.6 2 19 529 546 528 547 0.97

3 7 6.6e-06 0.00046 20.6 0.3 1 23 553 575 553 575 0.99

4 7 0.0034 0.23 12.1 4.2 1 23 585 607 585 607 0.98

5 7 0.00079 0.054 14.1 0.1 2 23 614 635 613 635 0.95

6 7 1.2e-06 8.4e-05 22.9 1.3 1 23 641 663 641 663 0.98

7 7 9.2e-05 0.0063 17.0 3.5 1 23 669 691 669 691 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.072	5	7.9	0.4	1	23	502	524	502	524	0.96
2	7	0.35	24	5.8	0.6	2	19	529	546	528	547	0.97
3	7	6.6e-06	0.00046	20.6	0.3	1	23	553	575	553	575	0.99
4	7	0.0034	0.23	12.1	4.2	1	23	585	607	585	607	0.98
5	7	0.00079	0.054	14.1	0.1	2	23	614	635	613	635	0.95
6	7	1.2e-06	8.4e-05	22.9	1.3	1	23	641	663	641	663	0.98
7	7	9.2e-05	0.0063	17.0	3.5	1	23	669	691	669	691	0.98

Sequence Information

Coding Sequence: atggccagcatcatcagcagcagcatcagcaacaataacaataataacaacaacagcagcgcaaCAAATGCAGCCAGCgtcgtcagcagcagcaacagcagcgcaaCAGCGCTGCCATCACTATTTGCcggtaacagcagcagcagtagcaacagcagcaacaacaacaacagcagcagcaatacaagaacaacaacagcagcaaacgtAGCAGTTGCCGCCAAAGACATGGACGGACTGATTGCCATCAATGATAGCGCATTATCGCAACAAATCGAATTTATACTACAAGATGCTCCCATGGAGCAGGATGACGAGCATCAGTTACAGCTAAATATGGCAGCTGCGGCAGCGAcgtcggcagcagcagcggcagcaacagccaaGCTCGACAACCACCCACcgacaacaaatgcaacaataacgacaacagcaacaacaaacagcgctTCCGCAtacatcatcaacaacaacaacaacagcagccacacTGTTGAGAATCAGCatcagcaactgttgctgcagcaacatcgcgcacagcagcagcagcagcagcaacatcatctgCTCAATGGGCGCCGCATCATTATACAATCAACAAACAGTGGTGCAACAGCGTCTGTTCTGTCAGCTGCTGAAATCAAAGAGGAGCAACTGGATCAGGATGATGAGCCGGAGGATGAGGAAGATGATCCCGAATTAAATGATGAGAATTTACAGGATATTGAAGAGGAGGCAAAGGCAGCTGAAGCCGATGAAGAACCCGAAACGGCATCACATTtgcatcaacaacatcatcatcaacaacaacagcagcagcaacaacaacatcatcatcaccaacagcagcagcagcttcataATCAACATCTGCAGACACAGGTCAAACTGGAACTAGACGATCTGCCCGATGATGACgaggatgaggaggaggaTGACGAAGAGCATATGACAACGCAGCCAGCACAGCTCGAGtcactgcaacaacaattggaaTACTCGGCAACGGCACAGCAGCTGGTGCTGCCAGCTGGCAGTATTGTTAGCACCACAACGCGGGCATTGGCGGTGCCTGTGTCGGAGGCAGCATTGGTGCAATTGCAACGTCGTCCCGTCTACATAAGCAATGCCACAATGAGCAGCTTGGCCGGTGCCACATATGTGCGCATGCCGGCCGCTGCTGTTATCAGTCGCAGTCCGATGACGGTGTTGAATGTGGTGCAACAATCGGGTGGACCCACCGCACAGCTCATATTGCAGgcggcaacagcggcaacaacagcgggtggaacaacagcaacatcacaGCCAGCAATAACAGCGGCGGCTACGTCGCCCAGCaacgagcagcagcaacagctggcaATTGCGAttgcccaacaacaacagcaacaacagcagcagcagcagcaacaacaacagcagcagcagcaacagcagcaacatcatcaatcCATTAAGCCAGCGCCTGTTACAAGCACTGTTGCAACGTCCACAAGCAGCTATCAGTGCATGGAGTGTGTGGAAAAGTTTGATTCAAAGGAACTATTCGATATACATCGCAGCGGGCACGCGAACAACATGAAATGCGCCATCTGCAACATGGTATTGAAATCATTAAAGAACTATGAGAAACATTGCCTGCGTTGCAAGCCCTACGAGTGTCAAATTTGTGGTCGTGTTGTACGCTTTCGTCCCAATTTTATAAAGCATATGCGCGTCCATACGGGCCAACAATCGGAGCGGCATAAATACAAATGCGAGGTATGCCACAAGGAGTTTATGAgctttgaatatttcaaagtGCACAAGAAGATACACAATGAGAATGTGAATTTAACCTGTGAGATATGTGGCAAGGTATTTAGTGCCCTGGCCTCGCTACGCGGTCACTCCAAGCTACATTCAGGCGTCAAGTTGCACAAATGCGATGTATGCGGCAAAGGCTTTGGCCAGCGTTACAATCTGAAGATACATGCGCGCACACATACGGGCGATTTTCCATTCGAGTGCAAGGTGTGCAAAAAGAAGCTGCATACACAATCATCGCTGCAGACGCACATGCAGGTGCATTTGCGGGATCAGCCCAAAGGTAGCGCCgccagcagtagcagcagcagcaccaccagcagcaacaatagcacaacaactgcagcagcagcagcagcagcaacaacaacagcaacagctgctgtcAAAATAGAACCGGAACTTGATAGACCCAGCACAAGTTTgctacagcagcaacaattgcaacagcagcagcaacagttgcaacatcatcatcatcagcatgaTATGGACATGGATGATCAGTCCGGTTTAAGTGATGAGGAGCATGAAAGCTCTATACATCATAACTCGCATATAAGTACGACAAACAATCGTTTAACCACCGGCGAGGATTCCTCAAATGAATCCTCATCGAATGCCTcgctacagcagcagcattccTCCTCAGCCAGCTCCTCGCATTCgtcgcagcaacagcagcaatataTTGTATCAACGCCCACGCGCACCATTGTTATCAAGAACtatatgcaacagcagcagcaacaatcaacagatcatcatcaacagcagcagcagcagcagcagcagccaactgGCAATGGCAGCTGTTCCTCGGGCGTACTGCATACACAGGTCATACAAAGCGGTGCGGGCACCAGCAACGGCCATCACATAATcaacagtagcaacagcagcagcagcaataacaatcacaataacaatagcaacaacaacagtagcagcagcaatagcaatggcagcagcaatcatcataacaacagcaatattagcaacaataacagcagcagcaacagcaatgcaacaacaacaacaacatcatcttCGGCCAGCAATTTGGCACAGCAATTGCTCCGTAAAACGCCAATTATACATTCAACGGGCACGCTAAGCTCGGCGCTGGCAAGTGTTGTCCATCAGACGGGCGTTGGCTCGCCGGCGCAATCACCATCATCTTCATCCACATCGTGTTCTTCCACCGTGCTGGTGTCCAAGGCAACGGGTGTGCCGATGTCAATTGCCTCATCGGCGGCCGTTGGGGGCTCCACAATTATACGCAGCACGCgcagtcatcatcatcatcatcatcaacagcagcagcagcagcaacagcagcaacaacagcagcagcaacagagcaactgcagcagcagcaaacattGTATTGTGAtggaacaacagcaaccacaacagcagcaacaacaacaacaacagcagcgtaACAACCACCGAAATCACCACCGACGTCGTCATCTGGCGGATATggacgacgatgatgatgacgatgatgatgatgaggaggagGCGTGCGCACAGTTGCGCGCTGCCACTAATggacatcatcatcagcaacagcagcagcagcaggaacaggagcagcaacatcatcaattgaatcagcatcagcagcaacatcaaaaTCACAATCATGGCCATCATAATAATAGCCACAATCATAATCATAAccatcatcataatcatcatcatcatcacaatcatcatcataatcattttgatgatgatgatgacgatgagaAATCATCACCGTCCCTGGCCACAGCGGCCATTATTAAAGTTGAACCGAATCTCTATTCATCCGGCTCTGGCGATAATTCCAATGATATGTTCATTAAGGAGGAGGTCATGTTTGAGGATTCCGCTGCACCGCATTCACCCCAATCGCCGCCCAGCTCGAAATTTCGCATCTCGAATTTTGATAGCGTTCTGGTTGATCATCATGTTGATCTAAATCATTCGCTGCCACCATATGGCAATCTATTTGAACCACACTCGATACCCGATAGCATACCCGTACAGCTATATcccgacgatgatgatgattttcGTTTGGATCATAGCTCACTGGGTGGTCTACACAATACCTCATCTTCCACAACCGATGGTGATTTCATAAAAAAGGAATGGGTCTATGGCAGCGGCACAAGCAGTTATGCCATGAATGGTAAATTCGATGATGATAGCGATGCTCTATGCGATGCTgcgaattttatatacaattga
Protein Sequence: MASIISSSISNNNNNNNNSSATNAASVVSSSNSSATALPSLFAGNSSSSSNSSNNNNSSSNTRTTTAANVAVAAKDMDGLIAINDSALSQQIEFILQDAPMEQDDEHQLQLNMAAAAATSAAAAAATAKLDNHPPTTNATITTTATTNSASAYIINNNNNSSHTVENQHQQLLLQQHRAQQQQQQQHHLLNGRRIIIQSTNSGATASVLSAAEIKEEQLDQDDEPEDEEDDPELNDENLQDIEEEAKAAEADEEPETASHLHQQHHHQQQQQQQQQHHHHQQQQQLHNQHLQTQVKLELDDLPDDDEDEEEDDEEHMTTQPAQLESLQQQLEYSATAQQLVLPAGSIVSTTTRALAVPVSEAALVQLQRRPVYISNATMSSLAGATYVRMPAAAVISRSPMTVLNVVQQSGGPTAQLILQAATAATTAGGTTATSQPAITAAATSPSNEQQQQLAIAIAQQQQQQQQQQQQQQQQQQQQQQHHQSIKPAPVTSTVATSTSSYQCMECVEKFDSKELFDIHRSGHANNMKCAICNMVLKSLKNYEKHCLRCKPYECQICGRVVRFRPNFIKHMRVHTGQQSERHKYKCEVCHKEFMSFEYFKVHKKIHNENVNLTCEICGKVFSALASLRGHSKLHSGVKLHKCDVCGKGFGQRYNLKIHARTHTGDFPFECKVCKKKLHTQSSLQTHMQVHLRDQPKGSAASSSSSSTTSSNNSTTTAAAAAAATTTATAAVKIEPELDRPSTSLLQQQQLQQQQQQLQHHHHQHDMDMDDQSGLSDEEHESSIHHNSHISTTNNRLTTGEDSSNESSSNASLQQQHSSSASSSHSSQQQQQYIVSTPTRTIVIKNYMQQQQQQSTDHHQQQQQQQQQPTGNGSCSSGVLHTQVIQSGAGTSNGHHIINSSNSSSSNNNHNNNSNNNSSSSNSNGSSNHHNNSNISNNNSSSNSNATTTTTSSSASNLAQQLLRKTPIIHSTGTLSSALASVVHQTGVGSPAQSPSSSSTSCSSTVLVSKATGVPMSIASSAAVGGSTIIRSTRSHHHHHHQQQQQQQQQQQQQQQQSNCSSSKHCIVMEQQQPQQQQQQQQQQRNNHRNHHRRRHLADMDDDDDDDDDDEEEACAQLRAATNGHHHQQQQQQQEQEQQHHQLNQHQQQHQNHNHGHHNNSHNHNHNHHHNHHHHHNHHHNHFDDDDDDEKSSPSLATAAIIKVEPNLYSSGSGDNSNDMFIKEEVMFEDSAAPHSPQSPPSSKFRISNFDSVLVDHHVDLNHSLPPYGNLFEPHSIPDSIPVQLYPDDDDDFRLDHSSLGGLHNTSSSTTDGDFIKKEWVYGSGTSSYAMNGKFDDDSDALCDAANFIYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00803213;
90% Identity: iTF_00803213;
80% Identity: -