Basic Information

Insect: Hirtodrosophila alboralis
Gene Symbol: L
Assembly: GCA_035043045.1
Location: JAWNNH010000216.1:1-3853[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 5.6 3.9e+02 2.0 2.0 14 23 1 10 1 10 0.93

2 15 1.1e-05 0.00074 19.9 0.4 1 23 16 38 16 38 0.99

3 15 0.048 3.3 8.5 0.3 2 23 114 138 113 138 0.91

4 15 0.002 0.14 12.8 0.4 2 23 164 186 163 186 0.95

5 15 0.024 1.6 9.4 0.7 1 23 268 290 268 290 0.97

6 15 0.0067 0.46 11.2 0.1 2 23 298 319 297 319 0.91

7 15 3.1e-05 0.0021 18.5 0.3 1 23 327 351 327 351 0.95

8 15 4.5 3.1e+02 2.3 1.6 2 23 387 409 386 409 0.95

9 15 0.0022 0.15 12.7 1.1 1 23 459 482 459 482 0.97

10 15 0.0014 0.097 13.3 1.8 2 23 648 670 647 670 0.96

11 15 0.099 6.9 7.5 0.1 1 23 676 698 676 698 0.92

12 15 0.29 20 6.0 0.7 2 23 706 727 705 727 0.95

13 15 0.64 44 4.9 0.5 2 23 820 841 820 841 0.94

14 15 0.0057 0.39 11.4 0.0 1 23 851 873 851 873 0.96

15 15 0.00019 0.013 16.0 1.2 1 23 878 900 878 900 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	5.6	3.9e+02	2.0	2.0	14	23	1	10	1	10	0.93
2	15	1.1e-05	0.00074	19.9	0.4	1	23	16	38	16	38	0.99
3	15	0.048	3.3	8.5	0.3	2	23	114	138	113	138	0.91
4	15	0.002	0.14	12.8	0.4	2	23	164	186	163	186	0.95
5	15	0.024	1.6	9.4	0.7	1	23	268	290	268	290	0.97
6	15	0.0067	0.46	11.2	0.1	2	23	298	319	297	319	0.91
7	15	3.1e-05	0.0021	18.5	0.3	1	23	327	351	327	351	0.95
8	15	4.5	3.1e+02	2.3	1.6	2	23	387	409	386	409	0.95
9	15	0.0022	0.15	12.7	1.1	1	23	459	482	459	482	0.97
10	15	0.0014	0.097	13.3	1.8	2	23	648	670	647	670	0.96
11	15	0.099	6.9	7.5	0.1	1	23	676	698	676	698	0.92
12	15	0.29	20	6.0	0.7	2	23	706	727	705	727	0.95
13	15	0.64	44	4.9	0.5	2	23	820	841	820	841	0.94
14	15	0.0057	0.39	11.4	0.0	1	23	851	873	851	873	0.96
15	15	0.00019	0.013	16.0	1.2	1	23	878	900	878	900	0.97

Sequence Information

Coding Sequence: GATCATCTGAAGATTCACATGAAGACGCATGATATCCAGAAACCCTTCCAGTGCAGTATGTGCAATCGTGGTTATAACACCGCTGCGGCATTGACTTCCCATATGCAGAAGCACAAAAAGAATGCGGCAATCCTGGCTGCTGGTGGTAATCCCAATGCATTGAACTATAGTCCACGCTCCACGGGCTCTGCCTCCATATCGAGTAATGGGAGTTTGCATAAGCGACGTTATGCCTTGGCCCTTGCCTCCGATAGTAGTCCCAGTCGTCTGGAGTTTCCAAAGCGGGCGCGTTCCCATGTTAATGCCACAAATGCGACGACACCAACGCCTACTCTGCTGCGTTGCAGCTACTGTAGCAAGGTGACGGAGTTCAATAGCCTGGAGCAACTGAATGCGCATTTGCAGAGTGCACACGAGCAGCTGGCGAGGAGTGGCACGAGCTCAGCTGTGGGGGAAGTGGAGGTCAGCAATGCCAATGGCTTCCAGTTGAGCTGCGAGTATTGCACCATGAAATTTGGGAATATTGCAACGCTATTCCAACATATGCGTGGCACACATCTGGATCGCTTGAGCAGTCCCAACTCCTACTATGAACACTTCAATCGTCTGGCCACGGCGGGCACATTTAGTCCAAGATTGGCCATGGAATTGCCCAAGATTATTAAGCAGGATTTAGCCAGTCCACAgcgggagcagcagcagcagcagcagcagaagctgGAACAGGAGCTGCCCACAGATTTGAGCAGCAATAAGCGACGCACAATGACACCACCAGAGCCAGCCGCTCCTCCAGGCATCTTCTTTTGCAATCAATGCAATGCGGGTCTCCCAGACTTTGAGAGCTTTCGGAATCATCTGAAGACGCACATAGCCGAGGGCATGCAGCTAATCTGTCCACATTGTGGCCTCAGTTTGCCCGAGCAGAGCGAATATGAACGCCATGTGGTTGCCCATTTCCTGATCAGCAGCAGCGAGTTCAATTGCAGCGCCAGTTGTGGCAAATCCTTTGCCAAATCCGATGAACTGCAGCAGCATCTAAATAGTGAGCATGTCCAGACGCTGCTCAAGTGTGCCCTGTGCTCGGAGCTCTGTGAGAATCGCATGGCCATGCAGCTGCATCTGGCCTGTGCCCACAGTCAGGAGACAAAGCTGCTGCGCTGCAGCGCCTGCCTGGAGCTCTTTCGCAATGATACGGACTTCCATGTGCATGTGAAGACGCGTCATCAGCTGGGCAATCAAATGGGAGCTGGTAATGGTTCCAGTAATGCCTCCAATCCTGCTGCTAGCAATTCCCTGCAGTGTATGTTCTGTCGCGCCGTTTGTGCCTCGGAGCTGGAGATGCACTTCCATTTGGCGGCACATGCTCGACAATTTCGCTGCCCCTCCTGCCCCGAAACGTTTCATGTGGAATTTCTGCTGGACAGGCACATGCAGAGCCAGCATGGCGGCCTTAAGGACAAGCAGCCCAGTTCACCCAACATGGGCAGCCTGTATGTGAACGCCTTGTTGCCACCGCtggctgccgccgctgctgcagcCGCAGCGGCcaccaataacaacagcaatctGCATATAGACTATAACGTGGCATTCAAGGGTTTGTTTGGCGGCGCCACCGCCACGCCCGCCAATGCCGCCGCCAGCCAGAAATTCTATAGTCCACTGCAAGTGGACACCAGCGGGCTGAAGCCACAGCAGTCGCCGCATCCGGCGCTCATGTATGGTCTGAGCCAGCGCTATCTGATGGAGATGTATGCGGCCAAGGCCACCTCGCCGGCGGCCAGTGCACCCGAGGCGACCCAAGCGACACAGGCGACACAGAATGCCACCGGCAGCAGCTACAGTTGTGGCATGTGCGAACGTCAGGATCTACGCAGCGAGGCGGAGTTGCACTCGCATCGCAAGTTGGCCCACAATCTGAAGACTGGCGTCAGCTTGAGATGTGCCTACTGTTCGGGTAACTTCAAGTCGCGCGCGGAGCTGGAGCAGCACATGAAGAGCTGCCACAATTCGAGTGGCAAACACAAGTGTCTCATTTGTGATGAGATCTTTCCATCGCCGGCCATACTGGCCGAGCACAAGCTGCAGCATTCCAAGGTGGGTCAGTCGGGCAAGTGTGCCCACTGTGGCCAGCAGCTGGAGCATGTGGCTGCGTTTCGTGCCCATCTCACCGAGCATGGCAACGATGGCAATTTGCCCATGGCCTGCATTTGTTGCCGCCAAACGTTGCACTCGGAGTTTGAGCTCAGTTTGCATGCCAAGTTCCATACCAAGTCGCCCAGCTGTGGCAGCCTGCAGGAGCCCGTCTGTGCTCTGTGCCTGGAGCCGCTACCCGGCGCTGGTGAAACTGCCAAATTGTGTGAGAAATGTTGTCGCAAACATAATCTCAATGGGAAACGCAGCAAGGAGcccgctgcagctgctgtggcCAACTCTGTCGCCTATTTGGAGAATCGTTGCAATCTCTGCAAAATGATATTGCCACATGCACAGAAGCTGCAGGAGCATCTGGTGGAGCATACCTTTGCCGGCACCGAACAGCGTGGCTTCAATTGTTATATCTGCTCCGCGGTCTTCACGGCGCCCTCGGGCCTTTTGGCCCACATCGCAGAGCATGGTGCTCGGCCATACGATTGCAATTTGTGCCCagagaaattttattttcgcgCTGAGTTGGAGCATCATCAGCGTGCCCATGAACTGAGACCagcaccaccagcagcagcagctccaatCCGCGCTCTCCCGGCACAGCCCAAACAGGAGACCCTCAGCTCTACCGCCAGTTCACCCATTGCACTTAGTCCCAGTCATGTCAAACAGGAGTTATATGAACCGGAAACAGCGCCTTCGCCAGCTTCTGAGTCGCCTGTCCAGGAGGAGGAGGAATATATTGAAGTGGAGCAGGTGCCACATGAAACCCGTTCGGTAGATCTTCTATCCGGTGCACACACTGAACGCTCCAGCAGCAGCGCCTAA
Protein Sequence: DHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSNGSLHKRRYALALASDSSPSRLEFPKRARSHVNATNATTPTPTLLRCSYCSKVTEFNSLEQLNAHLQSAHEQLARSGTSSAVGEVEVSNANGFQLSCEYCTMKFGNIATLFQHMRGTHLDRLSSPNSYYEHFNRLATAGTFSPRLAMELPKIIKQDLASPQREQQQQQQQKLEQELPTDLSSNKRRTMTPPEPAAPPGIFFCNQCNAGLPDFESFRNHLKTHIAEGMQLICPHCGLSLPEQSEYERHVVAHFLISSSEFNCSASCGKSFAKSDELQQHLNSEHVQTLLKCALCSELCENRMAMQLHLACAHSQETKLLRCSACLELFRNDTDFHVHVKTRHQLGNQMGAGNGSSNASNPAASNSLQCMFCRAVCASELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGGLKDKQPSSPNMGSLYVNALLPPLAAAAAAAAAATNNNSNLHIDYNVAFKGLFGGATATPANAAASQKFYSPLQVDTSGLKPQQSPHPALMYGLSQRYLMEMYAAKATSPAASAPEATQATQATQNATGSSYSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNFKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGQQLEHVAAFRAHLTEHGNDGNLPMACICCRQTLHSEFELSLHAKFHTKSPSCGSLQEPVCALCLEPLPGAGETAKLCEKCCRKHNLNGKRSKEPAAAAVANSVAYLENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPSGLLAHIAEHGARPYDCNLCPEKFYFRAELEHHQRAHELRPAPPAAAAPIRALPAQPKQETLSSTASSPIALSPSHVKQELYEPETAPSPASESPVQEEEEYIEVEQVPHETRSVDLLSGAHTERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00538445;
90% Identity: -
80% Identity: -