Halb011237.1
Basic Information
- Insect
- Hirtodrosophila alboralis
- Gene Symbol
- Csrnp3
- Assembly
- GCA_035043045.1
- Location
- JAWNNH010000478.1:126499-131971[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.098 1.9e+03 -1.4 0.2 84 118 32 67 12 68 0.54 2 3 0.056 1.1e+03 -0.6 1.4 76 111 107 142 78 158 0.63 3 3 2.1e-98 4e-94 314.7 12.7 2 218 330 541 329 541 0.93
Sequence Information
- Coding Sequence
- ATGAGGAGCATGTTCCGTCCGATAAAGAAGATTTTTacgtatatacaaaaaaatgcaagcaaTGGAACAATGTTTGGCAGCACAAATAGCCTGAATAATGTTGACAATGAAGCAGCAGCCACCACCaccagcatcagcagcagctcctCCCGACtagagcaggagcaggaggatGAGCAACAGTTGTCACCGCTGCCAGCAGCGGTGCCGCCTCCGCTCCCGCCACAGTTGGACGATGATGACATTGAGCGtcaaataaaaacttcaattaTTGATGCAAGCAAAGTAAATGCAGCCAAggcaaaaatgttgctgccactgcaaTTACAGCTGGATGATGAGCTGGCGGATTTTGCCCATGAACCGgatgaggaggaggaagaGGACGAGGAGGAACTGGATGATGAGCAGCTGGATGAACAGTATTTGGAGCTGAACAATTTTCccaataatgaaataattgtattaagcGAAAATGAGCTCAATTCTTCACTGGCCTCCGATAATATATCCGAAGATCCTTTGGCTATAGATGAATTTACGCAACCGCCAACACGCGACGAGGACGAGGAGCAGGAGGAGGCGGAAGCGGCAGCTGCGGCAAGCGCTGATCTAATGTGGCTTAAATTGGAAACGCCAACAGCGACAATTGGAGCAGCGACGTCGTCGTCCTCGTCATCGTCGTCTACAGCAGCCAAAATAACGCCCCAAAAAACCAAAGAGTTGGAATTACGCAGCGATGGTGGCTCCGATTCCGGTTTGGGCATTGAAAATGATAGACAAGCGACAACAggagtaacaacaacaataacagGAGctgttacaacaacaacaacaataacaacagcggCAAGCTCTTTGCAACCATTGCGCTCAAATTTAAAACGTCGCCTAGATGATGATGGCTTGGAGCTTAATTTGGTCTCAGATATTAatagcagcggcagcagctccAATTGTTGCACCAGTAGCACGCCACAAAAGCGACCCAAGCGttgcattaattttgataatgttaaaatctattattttccACGCCAACAGGGCTTCAGTTGTGTGCCCACCGCCGGCGGCTGTACGCTGGGCATGGGTGCACGGCATATTGCCTTCAAGACCATGACGCTGGCGGAGCATGCGGCTGAGCTGCGGCGTGCGCATCGCAGTCAAAatcaggagcagcagcaacagttgcaggtGCGCAATAGCAGCAATATTGGCTCCAGCAGCGATGAAAGCGAAGAATCCGAAGAGGATTATCTAAGCGAAGGCAGCGGCTCCGATGCCGATGATGGCTCCAATGGCTTCTTACAGCCCGTGACGCCCAAACAGCGACGGGCGCTGCTTAAAGCCGCCGGCGTACGTAAAATTGATGCGAGCGAGAAAATCGATTGTCGCGACATTCGCAATTCACGTGAAGTTTGCGGCTGTTCGTGTCGTGAATTTTGCGATCCGGAGACTTGTGCCTGCAGCCAAGCGGGCATTAAATGTCAAGTGGATCGCGCCATGTTTCCCTGCGGCTGCACGCGTGAAGCTTGCGGCAATAATGTCGGACGCGTTGAATTTAATCCCACACGCGTGCGCACACACTATATACACACGGTAATGCGTCTGGATATGGAACAGCGTCAAAGTCAAGGCACTTTGGCCACAAATAGTggcaacaatttgatttatggcAGCGGCAgtgcaacaggcaacagcagcagcaacacagcCGCCGTTGCCGCTGCCTCACATTGCTACTTTATGCAACCACAATCCAATTATAGCTCAGGCTATGCCTCGCCAGCTTATACGCCCGAAACAAGCGTTAGCTactatcaacagcagcaacaacaacaacaacagacgcCACAAACggcggcagcaacagttgctgctgtagctgctgctgctgtcgcctCGCCTGCCTCAGCTGTTCAGCAATCTAGCTACACCGCTGGCTATCCTCAATTGGATAGCCTGGACTCGGGCCTCTTTGCCAGCGGCAGCAATGCCACGCCCTCCTATGGCGAGCTGTTAACGCCCACCTATCATCCAACGCTCAGCTATAACAGCGCTCAGaTCAATACATACACCAATTATCAACAGACGACGCCGTCTGCCAATGTTGTTGGTGCTGGCTCATCCGTTGTTGTGGGTTACAGCTCGTGTGCGGTGCCATCGGTGCCGCCTTTTGGCAATGCCACAACAACCGCTTCGAATGCAACACAATATCAGCATGCAAATGCATTGGAAACCACCGCCGCCTCAATGaatgccaacagcagcagcagcagcagcatatcTGTGGTAACAGCGAGCAGCTGTTCCACTGGACTGGCCAGGCTAACTGGTGGCACAaatgtcgctgctgctgctggcgatTTTATCAGTCTCAATGCGCCCATTGGCAGCTCGTCGCGTTTATCGCAAATAAATGATTTGTTGCAGCACAATCGTAATACCACCGCCGCTTTGGTGGCCGTCTCTGAGGGTTATACTACAGTGCGGAATAATAGTAATAGCACCATTATCACCACCAGCATAGACTCCATTGATACGCCGCCCATTGTGGAGGATACACAGCGTAGTTGCATGACCTTTGAGGAGCTGCCACCGCCACTTATCAATCCCACGCCCATTGTGGCCGtacagcacaacaacaacaacaataataataagcaacagcagctgctgtcaGTTGCCACAACGCCACAGCCGCGTCAAGCATTGGATGCTGCCAGCATTAGTCTGGTTGAATCCTTGCCAGGACAAAGCAGCAATTGA
- Protein Sequence
- MRSMFRPIKKIFTYIQKNASNGTMFGSTNSLNNVDNEAAATTTSISSSSSRLEQEQEDEQQLSPLPAAVPPPLPPQLDDDDIERQIKTSIIDASKVNAAKAKMLLPLQLQLDDELADFAHEPDEEEEEDEEELDDEQLDEQYLELNNFPNNEIIVLSENELNSSLASDNISEDPLAIDEFTQPPTRDEDEEQEEAEAAAAASADLMWLKLETPTATIGAATSSSSSSSSTAAKITPQKTKELELRSDGGSDSGLGIENDRQATTGVTTTITGAVTTTTTITTAASSLQPLRSNLKRRLDDDGLELNLVSDINSSGSSSNCCTSSTPQKRPKRCINFDNVKIYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRSQNQEQQQQLQVRNSSNIGSSSDESEESEEDYLSEGSGSDADDGSNGFLQPVTPKQRRALLKAAGVRKIDASEKIDCRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNNVGRVEFNPTRVRTHYIHTVMRLDMEQRQSQGTLATNSGNNLIYGSGSATGNSSSNTAAVAAASHCYFMQPQSNYSSGYASPAYTPETSVSYYQQQQQQQQQTPQTAAATVAAVAAAAVASPASAVQQSSYTAGYPQLDSLDSGLFASGSNATPSYGELLTPTYHPTLSYNSAQINTYTNYQQTTPSANVVGAGSSVVVGYSSCAVPSVPPFGNATTTASNATQYQHANALETTAASMNANSSSSSSISVVTASSCSTGLARLTGGTNVAAAAGDFISLNAPIGSSSRLSQINDLLQHNRNTTAALVAVSEGYTTVRNNSNSTIITTSIDSIDTPPIVEDTQRSCMTFEELPPPLINPTPIVAVQHNNNNNNNKQQQLLSVATTPQPRQALDAASISLVESLPGQSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -