Halb004192.1
Basic Information
- Insect
- Hirtodrosophila alboralis
- Gene Symbol
- crm
- Assembly
- GCA_035043045.1
- Location
- JAWNNH010000144.1:430354-434635[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-08 9.2e-05 22.6 0.0 2 44 154 209 153 211 0.94 2 2 4.5 4.2e+03 -1.9 0.0 9 24 333 348 332 349 0.89
Sequence Information
- Coding Sequence
- ATGgaagacaacaacagcatgtgtaaaaatgttaaaattacgGCCTCGGCCGAGGCTGTTTctgtcgctgctgttgttgtcgccgGAGCAGCCGCAACCACAGCCACAACAACTACACATAATGGCAAAGGTGTGCAGCCCAAGCTGGCAGCGTCTGCTGCCGGGGTATCTACATccacagccacaacaacaacgacacaTAATGGCAAAGGTGTGCAGTTTAAGTTGGCAgcggctgccgctgccgcagcTGCTATCGCTGCTGCTGAGCCGGAGGAACTCTTGGGCTCGGTGACCACACACAATTGCCCCGGTACACGGGCCAGTGCACGTGTCatacaaaaaatgaaactcGATTTATCGCGTCCAATGACGCCACCGCCCCCAGAGCGTgagcataataaaaaagagGAGAAGGCCGCACAGAAGACGCCCTCACAGATGCGTGCCGCTACCAAAACGACCTGGACAAATCTGGAGCGTAATTGTTTTTTCGATGCAATCAATGAATTTGGCAAGGACTTTGAAGCAGTTGCCAAttgcataaataacaaattaaagcgACGCAATACAAGCATCGATTACAGCTTCAAAAGCAAGGATCAAGTGCGACAACATTATTATCAAACATATcacaaaattggcaaatatgtACGCTACTCGGATGAGCTCAAGAAACCTGCCCAAGAGCTGTACACGCTGGTTAATTATGGCGAAATGCGCcgcaaattgcaatttcttaCCGAGAAGCATTTTATGAAGCTGAAGCAGCTTATCTATCATGGCCATATTATTGTGCGCAGTAAGGGCAAAAATATACGCATTAAGACGCCCTCATGCAAGGCATTGCGTCGTCTCAATCAGCTCGATGATACATTGGAGGACATACGATTGCCCAGTAAAATTGAGGTGCTTGTTGGACCCGCCAATATGGAGGCATTTGGACGCGTACAGACGCTGGCACAGAATCCACGCGGCCGTGTCATTGTGCCGCTGCACAAGAAGCTTATAAGCTTTATCAAAACCTTTCAGTACAAATGGCGTAGCAATGATGCACGTCTCGCTGAGGAGAAGATGCtgcccagcagcagcaccggCATTGCTGTTGAACCGCCTGAGCCGGTGTCAGAGCCCGGACTTTGCTTTCTGCCCAAACCAGGCGTGGCCATACATCGTCCGCTTTTGAGTATAACAACATTTCTAAGTAGCGTTAATATTTGCCTAACGGCCTATGAGGAGCGTTTGGGCGTTAAAGTGCGCAGCGAGACGCTTGAAAGTACAGCGgcggcagctgctgccagCGCTAAGCGTGCACGCACTGAAAGCGGTTCAGAGAAACGTTCGCCCGAcaccaaaaagcaaaaaacacaGCATGAGAAACAATTGGATGAGGTGCCACCCGATGGCGGCGGTGGCAGTAATCCTGTTAAGCTAGAAAACGGCAAAGTCGATGAGCTAAGCGAGGAGATCAACGAGCTGCTAACACTGCCAActacagccacaacaacagtcgcagcagcagctgcaccaGCAACACCAACTCTACCACCACCACCTGCTCCCGCTCCACCCGCACCACCAACGCGTGCCAAACGTAGCGATTTTGGCACTGGCGGTGGCAAAGGTGccaaagctgctgctgctcgtaATTTTAAGCCTCTGCTCAGCGATGAGGTGATCAAGCGCATACGCAAGGGATGGACGGCAACAAGTTCAGCCGATATAACCATTGGCGATTTGTATGTGGTGCTGGGTGAGAATTCCAAATTGGagcttgaatatttttggtacGATCCAGAAGCGAGTACAATCAGCAGCAGTAGCACTGCCACCACCAGCACCACCACCAGCACCACCACCAGCTCCACATCTTCAGCAACAGCTCTGCCCTATAATATTAACGACTGTGATAGCGTGGAACGCGTTAAGTCCATCACAACGGCAACGATTAGCAATAAACTGAAGCATTTGCTGCTGGTTGCCAATTTAAGTGAACGTGTCCGTAAACGTCAATGCAACTGCGGTCACACTTGTGATCGTAAACGTGATCTAATCACCAAGGTTGAGTTGCTCAGCAATTTGGCAAGcggtgcaacagcagcaggatgCACTCTAACCGATGGCACCGAAACCATTTTCCGTACTCCAATGCCACCCGTGCGTCGTCCCATGGCCAATATTATTGATCCTGTGCGTCAAATGTCAAagCTAAATCGTCAGAGACTGTCACATCAGGTGCTGGTGCAACGTTGCATTTTGCCGGCAACCTCTGAAATGGGAAAGCATTATGATCTGCTGCGTCTGCGCAATTCACGAAATGGTCTTTTTGAGCCTATTGAACGTGTCAGCAGTAACGATAGCAGTCATTTAAGTACCATATTGGCCATGCCCACATCCTTGAAAACTACCTCCACCAGCacgagcagcaacagcgccaGCAGCGGTACCAAAATCAgtagcatcatcatcagcagcagcagcagcggcgttAGCACGCAACAATCGGAATGCAattttagcagcagcagcagcagcaattgcgCCGGCGGTACTGGCTTGGATATGCCGAATTTAGACTTTATCCTGGAAGAGACACCGTTGCCCGATACAAGCACCACATTGCCAGAAGCTGCCCAGGATGAGAGCACCACACAAAACTTCTTCAATGGCAGCGTCAGTCCAAATCATTTGTTGCGCGACTCCACGTCCAATGCACGCTGGCTGGAGGATAACATCAATGACTTTTCGCTGACCAGCTTGTTGGGCCATCTGAATGATTTTGATGCCACACGCGATATACTTGATCCATCATCAAATATGTCGGTAATCAGCGAAAGCAGCGTCGATTATCGACACAAATTTCAGGAAATTTCAGCATTGCTGCAGCAAGAGGAAAAAGATTAG
- Protein Sequence
- MEDNNSMCKNVKITASAEAVSVAAVVVAGAAATTATTTTHNGKGVQPKLAASAAGVSTSTATTTTTHNGKGVQFKLAAAAAAAAAIAAAEPEELLGSVTTHNCPGTRASARVIQKMKLDLSRPMTPPPPEREHNKKEEKAAQKTPSQMRAATKTTWTNLERNCFFDAINEFGKDFEAVANCINNKLKRRNTSIDYSFKSKDQVRQHYYQTYHKIGKYVRYSDELKKPAQELYTLVNYGEMRRKLQFLTEKHFMKLKQLIYHGHIIVRSKGKNIRIKTPSCKALRRLNQLDDTLEDIRLPSKIEVLVGPANMEAFGRVQTLAQNPRGRVIVPLHKKLISFIKTFQYKWRSNDARLAEEKMLPSSSTGIAVEPPEPVSEPGLCFLPKPGVAIHRPLLSITTFLSSVNICLTAYEERLGVKVRSETLESTAAAAAASAKRARTESGSEKRSPDTKKQKTQHEKQLDEVPPDGGGGSNPVKLENGKVDELSEEINELLTLPTTATTTVAAAAAPATPTLPPPPAPAPPAPPTRAKRSDFGTGGGKGAKAAAARNFKPLLSDEVIKRIRKGWTATSSADITIGDLYVVLGENSKLELEYFWYDPEASTISSSSTATTSTTTSTTTSSTSSATALPYNINDCDSVERVKSITTATISNKLKHLLLVANLSERVRKRQCNCGHTCDRKRDLITKVELLSNLASGATAAGCTLTDGTETIFRTPMPPVRRPMANIIDPVRQMSKLNRQRLSHQVLVQRCILPATSEMGKHYDLLRLRNSRNGLFEPIERVSSNDSSHLSTILAMPTSLKTTSTSTSSNSASSGTKISSIIISSSSSGVSTQQSECNFSSSSSSNCAGGTGLDMPNLDFILEETPLPDTSTTLPEAAQDESTTQNFFNGSVSPNHLLRDSTSNARWLEDNINDFSLTSLLGHLNDFDATRDILDPSSNMSVISESSVDYRHKFQEISALLQQEEKD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -