Halb012313.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hirtodrosophila alboralis
Gene Symbol
ct
Assembly
GCA_035043045.1
Location
JAWNNH010000522.1:314431-344588[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6e-26 1.6e-22 79.4 0.0 3 72 754 824 752 829 0.95
2 3 5.8e-32 5.7e-28 96.9 0.0 3 77 1257 1332 1255 1334 0.96
3 3 3.5e-31 3.5e-27 94.4 0.0 3 76 1533 1607 1531 1610 0.96

Sequence Information

Coding Sequence
atgaagaaaccGCGACAACGTCTTCGTCCACGTcgtcatcatcttcatcatccGCATCGTCAACGCAAATTACGCGTCGTCAAAATAATTGCCGTGGGTCTCTCAAATGCGACCAGTCAGCCCCATCAGACCCAACAGCCTTggccaATTAAAGCACTTTTGGATGAGTTGCAACGTTTGCGCGCTCTGGAAAAAACTCATCTGGTACAAATCCAAAGGCTCGAGGAGCATTTGGAGGTAAAACGACAGCACATAATGCGTCTTGAGGCGCGTTTGGATAAGCAACAGATCAATGAGGCATTGGCCGAGGCAACTGCATTGGCTGCCGTTAATGCGGCTgccacaaataataataataccagcaatagcaacaataataataatagcaataacaacaacaatcacagcaGCCAGAGCAATGATAACAACAATGAGACGACAGTGTTCAAATCAACAGATCTAACAACATCAACCCATCAACATAATGtcgatgatgacgatgacgatgataaTGATCATGATCATGTTAATGATCTGcacgataacgataacgataacgataacgatgatgatgaggatatGGATATGGCCAGCAATGAGCTACAACATAACGTATCCAATAATAATCGTCATGACGAGGATAATGATGAGGATGAGCCCGAGGAACAGCATGCCGATATATCCAATGTTATCGCCAATGTAGACAGCAATgagctaaaaatcaaaaaggagCAACACAGTCCACTGGATCTGAATGTGCTCAGTCCACAATCGGcaattgccgctgctgccgcagccgcagcagccgcTGCCTGCGCCAACGATCCAAATAAATTCCAAGCTCTGCTCCTGGAACGCACCAAAGCTTTGGCCGCCGAGGCGCGTAAAAATGGTGGCAGCGATGGCGGCAATTCAGCTAGCGAAGAAatgccgcaacaacaacaaccagcagAGCCAGCAACAGCTGATGATCAAGTAGCAgctgaagaagaagaagaagatgttgaagaagaagaagaagcagcagcagatgcAACAGCCACAGCCAAGGCGCCGCCTGAAACAAGCAAAAACGAAATGGAAACGACTGAAAATGAAACATTAGCCGATGCCAATTTGCAGCCAAAAGTCGAAATTCTTGATACTGACGAGGCTGCTGGGCCAGCTGGGGAGGGTGAGGGTGAGGGGGTGGGCCAAACGCTGGAAGAGCAGCTGGTCAATAGCTATTGGCGACGTGGCTTTGAAACtaatacagcagcagcaacagttgccgctgcagctgtagcaacagcaactgggAGCAAAACGCcaacaatttatcaaaatgcCATTGCGGTACAGCAGCAATTGTTGccgccaccaccgccaccgccgccgccgtcaTCACAGCACTATGccacgcaacaacaacaacaacaacagcaacactatcagcaacaacaacaacaacaacaacagcaacagcagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCAACACGCCTAGATGCTGGACCACACCATCCTCATGCGCaccatcaacaacagcagcagcagcagcaacagcagcagcaacagcagcagctacatcagcaacatcatcacaatagcagcagtagcagcaacagcagcaacgatCCCTTGAATCATCATCATGGCCATCATCATGGTAATCCCCATGTGCAGCTGTTGCATGCCCATCATATGGCAGCACATCATGGTGGCGACTCCAATTCATCCAGCGCCAATAGCACACCCAATAGCACCGCTCAGCTGGCGGCAAGCATTGCCAGCACGCTGAATGGCAACAAGTCGCTGTTGCAggcagctgccgctgccaatgttgccgccgctgccgttgccgttgccgaggacaacaacaacagtctgACGCCAAATGCCAATGCCGCAGCAGCGGCTGCCGCCATGGCCGCCCATGCACAGCATGCCGCCGCCTTGGGTGCACCAAATTTTCTGCCCAATTTGCCCAGTTTGCCGGCATTTCAatttgctgccgctgccgccgctggcCAAGAGGCACGAGCACATTTTCGATTTGCCGACTCCGATTTGCAGTTGCAACCGGGCGTTGGTATGGCCGGTCGCCTGGCCGATTCCCTAATACCCAAGGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTACGCTACAATATGGATAAATATGCGAATCAAGCATTGGATACACTGCACATCTCGCGACGTGTACGAGAACTGCTCTCAGTGCATAATATTGGACAACGTTTGTTTGCCAGATATATATTGGGTTTGTCACAGGGCACCGTTTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTGACCGAGAAGGGTCGTGACAGTTACCGCAAAATGCATGCCTGGGCCTGTGATGATAATGCTGTCATGCTGCTTAAATCGCTAATACCGAAGAAAGaTTCTGGATTGCCTCAGTATGCTGGACGTGGCGCTGGCGGCGATGATTCCATGTCTGAGGATCGCATTGCGCACATACTCAGCGAGGCCTCATCTCTGATGAAGAGCAATGTTGTTGCcgcccagcaacaacaacaacagcagcaacaggagcatCAGCGTCGTCATGCTGCCGTCGATGATACACACAGCAATGAGGATAGCAAATCACCGCCCCAAAGTTGCACTTCACCCTTCTACAAGGTCGAGCAGCAGcataagcaacagcagcagcaacagcaacagcagcaacaacagcaacaattgcatgTCTCTGAGCATGGACAGCGTGATCAACGGGATGCggctgcagcagcggcagcagctgttgccgttcaccagcaacagcagcagcaacagcgcgAGCAGCGCGAACAACGTGAGGCAGCACAGCGGGAACAGCAGCAACGCTTGCGTCACGAGGATCTCGCACAGGATAAGATGGCACGTCTCTATCAGGAGATAATTGCCCGCACACCGCGTGAGGCAACCTTCCCAAGCTTTTTGCTATCGCCGTTCTTTGGTGGCGCCGCCGGAATGCCCGGAGCAGCTGCCAATCCATTCCCAGCGGCCATGGCCGCCGATGAGAATATGCGTCATGCGTTCGAGCGGGAAATTGccaagttgcaacagcagcagcaacagcatcagcagcaggcGCAGGCCGCCAGTTTTCCCAATTTTTCCAGTTTGATGGCACTGCAGCAACAGGTGCTAAATGGTGCACAGGATCTGTCGCTGGCCGGCAAGGATATCAAGCTAAATGGCCAACGTTCCTCCATGGATCAacacagcggcagcagcagctccaagGATGGCGAACGTGGCGGCGATGATGatcgcaacagcagcagctttcCAGCATTGCCACATGCCCGCAAATCGGATGGTGGCAATACACCAGCACCGCCAGCACCACCAGCGCCGCCATCAGCtggtggcagtggcaatgccaatgcagtcgcagcagccgcagcagcaactgttgccagCGGTCATGGCAGCAATTCGGCAGCGCCCAGCCCCCTAAGCAATTCCATATTGCCGCCAGCATTGAGCAGCCAGGGTGAGGAGTTTGCGGCAACAGCAAGTCCCTTGCAACGTATGGCATCCATAACAAATTCATTGATCACACAGCCGCCGGTAACGCCGCATCATTCGCAGCCACAGCGGCCCACCAAGGCGGTGTTGCCACCAATAACCCAACAGCAATTCGATATGTTCAACAATCTGAATACCGAGGATATTGTGCGTCGCGTTAAGGAGGCACTGTCACAGTATAGCATCTCGCAGCGTTTGTTTGGTGAATCCGTGTTGGGTTTATCTCAAGGTTCCGTATCGGATTTATTGGCCAGACCAAAGCCCTGGCATATGCTCACCCAGAAGGGACGTGAACCGTTTATACGCATGAAAATGTTCCTGGAGGATGAGAATGCGGTGCATAAATTGGTTGCCAGCCAATATAAGATTGCGCCGGAGAAATTAATGCGTACGGGCAGCTATAGTGGCAGTCCACAGATGCCACAAGGATTGGCCAATAAAATGCAAGCGACACTGCCCATGCAAAAGATGATGAATGAGTTGAAGTTGCAGGAGCCCGCTCAGCATATTATGCAACATATGCAGGCAGCGGCCGCAATGTCGGCGgccatgcaacagcaacaacaggcaGCTGCCGCTCAAGCAGCGGCCGTGCAACAGGCTCAGGCTCAGGCACTCAATCAGCAgtcgcaacagcagcagcaacagcagcagcagcaacaggcagcggtggcagcagcagctgcggcCCAACAGCAAGCACAATTGTTGCATCATCAGAATATGTTGCTAACATCGCCCGGCCTGCCACCGCAGCATGCAATCAGCTTGCCAGCGGCAAGTACGCCCAGTGGACAGCCCGGTGGCAATCCATCGGTTGGTGCAACGCCCGTAAGTGGTGAAAAGAAGCCCATGATGATGCCGGTGCACGGTGGTGCACATGCCCCAAATGCTATGCGCAGTCTGCATCAGCATATGTCGCCAACGGTTTATGAAATGGCCGCACTCACCCAAGATCTGGATACACACGATATAACCACCAAAATCAAGGAGGCCCTGCTGGCCAACAATATTGGCCAAAAGATCTTTGGCGAGGCGGTGTTGGGTCTATCGCAGGGCTCCGTATCGGAGCTGCTGAGCAAGCCCAAGCCCTGGCATATGCTCTCGATCAAGGGACGTGAACCCTTCATACGCATGCAACTCTGGCTGAGCGATGCCAACAATGTGGAACGCTTGCAGCTGCTGAAGAATGAGCGGCGGGAGGCGAGCAAACGTCGTCGCAGCACTGGACCCAATCAGCAGGACAATAGCAGCGATACATCCAGCAATGATACTAACGATTTCTATACGAGTAGCCCCGGCCCCGGTTCGGTGGGCTCATCGGTGAGCGGTGCACCGCCGAGCAAGAAGCAGCGTGTTTTATTCTCGGAGGAGCAAAAGGAGGCGCTACGCTTGGCATTTGCATTGGATCCGTATCCAAATGTGGGCACCATTGAATTTCTGGCCAATGAGCTCAGTTTGGCCACGCGAACGATTACCAATTGGTTCCACAATCATCGCATGCGTTTGAAGCAACAGGTGCCGCATGGCCAGCCCGGCCAGGATAATCCGATACCCAGTCGCGAGAATACCAATGCCACACCCTTTGATCCCGTCCAGTTTCGCATACTGTTGCAGCAACGTCTCGTCGAGTTGCATAAGGAGCGCATGGGCTTGAGTGGTGCGCCCATACCATACCCACCGTACTTTGCAGCGGCTGCCCTGCTGGGACGCAGCTTGGCTGGCATACCCGGCGCTGCGGCTGCAGCGggtgccgctgctgctgccgctgctgccgtgGGCGCCGCTGGCGGCGATGAGCTCCAAGCGCTCAATCAGGCTTTCAGGGAGCAAATGAGCGGCTTGGATTTGTCAATGCCAACGCTGAAGCGTGAACGCAGCGATGATTATCAGGATGAGCTGGAACTAGATGCCAGCGGTCACAATATGAGCGACAATGAATCCATTGAGGGCGGTCACGAGCCGGAGCATTCAGTCGCCGTCTCGGACTATGAGAAGGCGTTGCAAAAGTCGGCACTTGCCTcagcagctgccgctgccgcctaTATGAGCAATGCAGCGCGCAGTTCACGCCGCAAGCCTGCCGCACCACAATGGGTGAATCCCGCTGGCGCTGGCACACCCACAGGTGTGGgtgctgctgtggcagctgccgctgctgctgctgccgccgccctAGCCGCCGCCGGtgatagcagcagcagtgagCGCATTATCAATGGCGTTTGTGTGATGCAAGCCTCCGAATATAGTCGGGATGAGACGGACAGCGTCAAGGGTGGCCTCGACTCGGCTGGCAATGATGCGGAAAATGATGAACATGCGCAGCTAGAAATTGAGCAGCGTTTCATGGAGCCAGAGGTGCGCATCAAGCAGGAggaagatgatgatgaggaccaacaacagcagcagcagcagcaacagttgcagcaacagcagcagcagcagcagcaagatgAGAGCAACGCCTCACGCATTGATTGTGATGCGGATAAACAGCTCAAGGTGATCAATGAGGAGAAGTTGCGTTTGGTGCGTGTGCGACGCCTCAGCAGCAATGCTGATCCCGATGAGCTTTGTGCCACGGCGCAGCCAgcgacaacagcagcggcagcagcagcagcgacgccaGCGGCAGCTGCGTGGAATTACTAA
Protein Sequence
MKKPRQRLRPRRHHLHHPHRQRKLRVVKIIAVGLSNATSQPHQTQQPWPIKALLDELQRLRALEKTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAVNAAATNNNNTSNSNNNNNSNNNNNHSSQSNDNNNETTVFKSTDLTTSTHQHNVDDDDDDDNDHDHVNDLHDNDNDNDNDDDEDMDMASNELQHNVSNNNRHDEDNDEDEPEEQHADISNVIANVDSNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEARKNGGSDGGNSASEEMPQQQQPAEPATADDQVAAEEEEEDVEEEEEAAADATATAKAPPETSKNEMETTENETLADANLQPKVEILDTDEAAGPAGEGEGEGVGQTLEEQLVNSYWRRGFETNTAAATVAAAAVATATGSKTPTIYQNAIAVQQQLLPPPPPPPPPSSQHYATQQQQQQQQHYQQQQQQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSTRLDAGPHHPHAHHQQQQQQQQQQQQQQQLHQQHHHNSSSSSNSSNDPLNHHHGHHHGNPHVQLLHAHHMAAHHGGDSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAAAAAAMAAHAQHAAALGAPNFLPNLPSLPAFQFAAAAAAGQEARAHFRFADSDLQLQPGVGMAGRLADSLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFARYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRIAHILSEASSLMKSNVVAAQQQQQQQQQEHQRRHAAVDDTHSNEDSKSPPQSCTSPFYKVEQQHKQQQQQQQQQQQQQQLHVSEHGQRDQRDAAAAAAAAVAVHQQQQQQQREQREQREAAQREQQQRLRHEDLAQDKMARLYQEIIARTPREATFPSFLLSPFFGGAAGMPGAAANPFPAAMAADENMRHAFEREIAKLQQQQQQHQQQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSMDQHSGSSSSKDGERGGDDDRNSSSFPALPHARKSDGGNTPAPPAPPAPPSAGGSGNANAVAAAAAATVASGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQHIMQHMQAAAAMSAAMQQQQQAAAAQAAAVQQAQAQALNQQSQQQQQQQQQQQAAVAAAAAAQQQAQLLHHQNMLLTSPGLPPQHAISLPAASTPSGQPGGNPSVGATPVSGEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFREQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPEHSVAVSDYEKALQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPAGAGTPTGVGAAVAAAAAAAAAALAAAGDSSSSERIINGVCVMQASEYSRDETDSVKGGLDSAGNDAENDEHAQLEIEQRFMEPEVRIKQEEDDDEDQQQQQQQQQLQQQQQQQQQDESNASRIDCDADKQLKVINEEKLRLVRVRRLSSNADPDELCATAQPATTAAAAAAATPAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00495757;
90% Identity
iTF_00802737;
80% Identity
iTF_00802737;