Hsem014788.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- MAZ_1
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000178.1:2784194-2806543[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.39 21 6.2 9.3 1 23 258 280 258 280 0.98 2 17 0.00036 0.019 15.7 2.4 2 23 288 310 287 310 0.91 3 17 3.7 1.9e+02 3.1 0.5 1 23 314 336 314 336 0.96 4 17 0.081 4.3 8.3 0.5 1 20 341 360 341 360 0.96 5 17 0.098 5.2 8.1 4.8 2 23 369 391 368 391 0.94 6 17 0.067 3.6 8.6 2.2 2 21 408 427 407 428 0.91 7 17 0.098 5.2 8.1 4.8 2 23 466 488 465 488 0.94 8 17 0.21 11 7.0 0.1 3 20 500 517 499 519 0.94 9 17 0.0097 0.51 11.2 4.9 1 23 680 702 680 702 0.98 10 17 0.031 1.7 9.6 0.1 1 22 709 730 709 732 0.90 11 17 0.56 30 5.7 1.7 1 23 763 786 763 786 0.80 12 17 0.0022 0.12 13.2 1.1 2 23 791 813 790 813 0.95 13 17 1.6 83 4.3 1.3 2 23 878 900 877 900 0.95 14 17 9.2e-05 0.0049 17.6 0.6 3 23 973 993 972 993 0.98 15 17 0.002 0.11 13.4 3.3 1 23 999 1021 999 1021 0.99 16 17 0.0082 0.43 11.5 1.5 1 20 1028 1047 1028 1050 0.88 17 17 0.00044 0.023 15.5 0.4 1 23 1056 1079 1056 1079 0.95
Sequence Information
- Coding Sequence
- ATGGTGTGTCTGAACACGAGCGAGGACTGCAGGCTGTATGCCTCCAACACATACAACCTGGACATGGAGTATGAACATTTGACTGGAATATCACTACAAGGCCTGACTCAATTTGAGGCTCAGTTTTGTGCTGAGTGCGCTCAGAGGCTGAGCAACTGCAGCAAGTTTCGTGACAGGAGTCTCAGAGCCTATCATTTACTGATGGGCTTGGTTGAGGAGCAAGAGACGATAAAAACACAGGACATTATATCACTCGGCAGATCTAATAATCTCGCATCAAgcatagtaaaaaaaacctttgaaCCAGATCACTGCGACTTATAtctgaaatataaaaaacatgAAGATAACGAGGAAATTGGGAAACTCCTAGAGAAGACAAAACAAGAAACGACAGACAAAACAGTCAGTATTGAAATCGAATGCGTTAACGGGAACCTAATACTGAAGCCTgttaaagaaaatgaaaattcgGGTAACGTCCAAACTGGTGAAGAGGATAacggtgatgatgatgattttgaagttgatgatgatgattttgaaGTTGATGATTCGAGCGATAGCGATAGCGACAGTGATTCGGATTCAACAGCTACAAATAAAGatccAGACAGTGATCCACAACCAAAAATTGGTAAACATAAAAAACCGCTAAAGATTGAGCAATTATTCAAGTATTACAATGTAACGGAGTTGACTCAAGAGGAGCAGTTGGCAGACTTAGAGAAGAGAAAGGAGAGagacaataattattgtataagAAGGCCGCATAAATGTCTGATATGTTACAAGAGATTCCATTTTTTGAAGTATTTCAAAAAACATATGGACAAGCACACTGATaAACGTGGGCAGTGCGTGTGCCCCGTATGCGGGCTGCACTACCGCACCAAGCGGCAGCTGCGGCGCCACGTGGACAACGTGCATAGAAGGCGATACAGCTGCAAGAGCTGCACCTTCGTCACCAACGAGATGTCGACGGCGTGGAAGCACCTGAACTGGCACAAGAGGGAATGGTACACGTGCCCGCACTGTCTGGAGGAGCTGAGCTCGAAGTCGCTGTACCAACTCCACCTGTGGCACGTGCACTGCAGCGAGCTAACGTGCACGTTGTGTCACAAGGCCTTCAGGACCGAGCGCGGCCTGCGCTGCCACATCAAGCTGAAGCACTGCAGGGAAACACAGGACCACCTGTGGCACGTGCACTGCAGCGAGCTGACGTGCACGTTGTGCCACAAAGCCTTCAGGACCGAGCGCGGCCTGCGCTGCCACATCAAGCTGAAGTACTGCAGGGAAACACAGGTGACAACTTCCTCTTTGAATAAAGTAAACGGTCGCAGCTCGAAGTCGCTGTACCAACTCCACCTGTGGCACGTGCACTGCAGCGAGCTGACGTGCACGTTGTGCCACAAAGCCTTCAGGACCGAGCGCGGCCTGCGCTGCCACATCAAGCTGAAGCACTGCAGGGAAAAACAGAACAAAAAACAACAGTTCTGCGAGGAGTGCAACATTCGCTTCATGTCCGAGGAAACGTACCGCCAGCACCTGGAAGAGTCGGACAAACACGCCGCTGACGGcaCCATAAAAGATGAGGAAATGACATCGGGTCCAGAAGACGACGCTAACATACAACATGTCAGCGAAAGACTTATAGAAAACATAGTACCAGAAAAAGATatagaaaagataaataaagatGAAGAGACATATAATTGTGATTCCAAAATGGAGAATTTTGAAGATATCCCCACCGAATATTTGGAAGATTTTGACGATTTTCTTGATGTTGATATTAATTTGCAATCAGAAGTTGGCAATGAAGATACTAAAAATGTCGCAGTCAGTACTAACATTCAACAGTATAAAAACACAATAGAAGAGAGGCTACTGGAGTCAagaattatgattaaaaaaccaaaaaaagatgTGGATTATGAATACTTGAAGGAGTACACGATAACCTGGTTAACCCACGAACAACAGTGCGAGGAGATACAGAAGAGAAGAGAGTCTACGAACTTCTTGAAGTCGGAGTTCAAGTGTGGGATTTGTTTCAAGGGATTCTGTTACCTCAACACTTACAAGACGCATATGGACAAACATACTGATAAATATGGCCAGTTCGAATGCCCCGTGTGCTGGCTCCGCTACCCGACGCGCATCCGCCTCCGCAACCACATCGGGGGCAACCACAGCCGGCGTTACGCGTGCAGCCGCTGCCCCATGGTCACCAACCTCAGGGGCACGGCGGTCAATCACGCGAAGTGGCACGCGGGCACCGTGTACCAGTGTCCACATTGCCCCGAGGTGTCTATCTCTAAGTCCGCGAGTTTCTGCCACATACGGATAAACCACCCCACAGATGTGGTGTGCGCGCTGTGCGGCTTCTGCTTCATGAACAAGCGCGGGCTTCAGAAGCACGTGCTCATGAAGCATCGCTTGGAGAACGTGCAGAACCCGTCGGGCCCGCTGTGCGAGGCGTGCGACGTGCGCTTCGCGTCCGAGGCGGCGCACCAGCAGCACCTGAAGGTCTCGCCCAAGCACGCCGCGGGACGGAAACTGGTGCGCAACACCCCGCTCACAAAGGGCTCCAAAAACCGGTTACCCAAAATTACCAAGGACCCCGTTAAGTGCGAACAGTGTGGCTTGCGACTGCAGAGCTACAGGGCGTACTACCACCACTTCCGGATCGATCACCCGGATAAGGCGCGCACGCAGCTCCCGCATGCGGCGCTGCTGTGCGAGCTGTGCGGGGGCGCGTTCGGGGTGAGGCACACTACTACAGCTCCCGCATGCGGCGCTGCTGTGCGAGCTGTTCGGAGTGAAGCACACTACTACAGGTCGCACTACCACCACTTCCGGATCGATCACCCGGATAAGGCGCGCACGCAGCTCCCGCATGCGGCGCTGCTGTGCGAGCTGTGCGGGGGCGCGTTCGGGGATTCGTCGCACCTACAGAAACACATGCTGAAGCATACGGGTTCCCGGTCGTACCAGTGCGACACGTGTAGCCGCACCTTCTACACCAAGCACGGCATCACGCTGCACGTGCAGACGCACGACGCCAGCCGCCCCACGCACGCGTGTCCCGTATGCGGGAGGCATTTCACCAACAAACCGAACCGCGACCGGCACGTCTGGACGCACAAGAAGCGCAAGCCGTACCCGTGCGACGAGTGCGACAGGACGTTCGCGGACAACTCGGCGCGGCGCGAGCACGTGCAGCACGTGCACCGCCGCCGCCCCTACCCGCGCAGGCCCCGCGGCCCGCCGCAGCGCAACAGCCGCCCGCGCGATGCGCTGCTCGCCGTGTTCGGCGCCGCCCGGGTGGAACAACCTGCTCCAGACGTCGAGATGCTTGAAGACTAA
- Protein Sequence
- MVCLNTSEDCRLYASNTYNLDMEYEHLTGISLQGLTQFEAQFCAECAQRLSNCSKFRDRSLRAYHLLMGLVEEQETIKTQDIISLGRSNNLASSIVKKTFEPDHCDLYLKYKKHEDNEEIGKLLEKTKQETTDKTVSIEIECVNGNLILKPVKENENSGNVQTGEEDNGDDDDFEVDDDDFEVDDSSDSDSDSDSDSTATNKDPDSDPQPKIGKHKKPLKIEQLFKYYNVTELTQEEQLADLEKRKERDNNYCIRRPHKCLICYKRFHFLKYFKKHMDKHTDKRGQCVCPVCGLHYRTKRQLRRHVDNVHRRRYSCKSCTFVTNEMSTAWKHLNWHKREWYTCPHCLEELSSKSLYQLHLWHVHCSELTCTLCHKAFRTERGLRCHIKLKHCRETQDHLWHVHCSELTCTLCHKAFRTERGLRCHIKLKYCRETQVTTSSLNKVNGRSSKSLYQLHLWHVHCSELTCTLCHKAFRTERGLRCHIKLKHCREKQNKKQQFCEECNIRFMSEETYRQHLEESDKHAADGTIKDEEMTSGPEDDANIQHVSERLIENIVPEKDIEKINKDEETYNCDSKMENFEDIPTEYLEDFDDFLDVDINLQSEVGNEDTKNVAVSTNIQQYKNTIEERLLESRIMIKKPKKDVDYEYLKEYTITWLTHEQQCEEIQKRRESTNFLKSEFKCGICFKGFCYLNTYKTHMDKHTDKYGQFECPVCWLRYPTRIRLRNHIGGNHSRRYACSRCPMVTNLRGTAVNHAKWHAGTVYQCPHCPEVSISKSASFCHIRINHPTDVVCALCGFCFMNKRGLQKHVLMKHRLENVQNPSGPLCEACDVRFASEAAHQQHLKVSPKHAAGRKLVRNTPLTKGSKNRLPKITKDPVKCEQCGLRLQSYRAYYHHFRIDHPDKARTQLPHAALLCELCGGAFGVRHTTTAPACGAAVRAVRSEAHYYRSHYHHFRIDHPDKARTQLPHAALLCELCGGAFGDSSHLQKHMLKHTGSRSYQCDTCSRTFYTKHGITLHVQTHDASRPTHACPVCGRHFTNKPNRDRHVWTHKKRKPYPCDECDRTFADNSARREHVQHVHRRRPYPRRPRGPPQRNSRPRDALLAVFGAARVEQPAPDVEMLED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -