Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000178.1:3050087-3066318[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.2 1.2e+02 3.8 1.4 1 23 377 399 377 399 0.89

2 10 0.05 2.7 9.0 0.2 2 23 407 428 406 428 0.96

3 10 0.046 2.4 9.1 1.3 1 23 432 454 432 454 0.87

4 10 0.0017 0.089 13.6 4.3 1 23 459 482 459 482 0.96

5 10 0.0013 0.068 14.0 0.2 1 23 486 509 486 509 0.96

6 10 0.0094 0.5 11.3 0.1 2 21 521 540 521 545 0.93

7 10 0.00018 0.0095 16.7 0.0 3 23 622 642 621 642 0.99

8 10 0.00013 0.0069 17.1 4.0 1 23 648 670 648 670 0.99

9 10 6.1e-06 0.00032 21.3 3.4 1 23 677 699 677 699 0.98

10 10 0.0016 0.085 13.7 1.8 1 23 706 729 706 729 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.2	1.2e+02	3.8	1.4	1	23	377	399	377	399	0.89
2	10	0.05	2.7	9.0	0.2	2	23	407	428	406	428	0.96
3	10	0.046	2.4	9.1	1.3	1	23	432	454	432	454	0.87
4	10	0.0017	0.089	13.6	4.3	1	23	459	482	459	482	0.96
5	10	0.0013	0.068	14.0	0.2	1	23	486	509	486	509	0.96
6	10	0.0094	0.5	11.3	0.1	2	21	521	540	521	545	0.93
7	10	0.00018	0.0095	16.7	0.0	3	23	622	642	621	642	0.99
8	10	0.00013	0.0069	17.1	4.0	1	23	648	670	648	670	0.99
9	10	6.1e-06	0.00032	21.3	3.4	1	23	677	699	677	699	0.98
10	10	0.0016	0.085	13.7	1.8	1	23	706	729	706	729	0.91

Sequence Information

Coding Sequence: ATGAAGTGCTGCGTGCCTTTGTGTAGAAGTACAGGTGATAATCATCCGATTACTGTCCCTGTACAAGAAAATCAAGAGTGGATCACGTTTAACAGGTTTCCTGCAACACCCAAGCAGCGGGCAGCATGGCTGGAGATGTTAGGTTTGATAGAGAGTGACTTACCACCAGGTGCGGTGGTGTGCTCAGAACATTTCAAAAGGAATGATTTCATTGTGATGTACGATGGCAACGTAAAGCTAAAGAAAGACGCTTTACCTTTACAGttctgCATGATATGCCTGGCATCTGACGACAGCAAAATGTATCCGATGGACCAAAATCATTTAGGGAAGGCCTACACGAGCATCACAGGAAATTCgGTGACCCATATTCGCGACAAAATCAAAACTTCGCCAAGGGTGTGCGTAGAATGCGCTCAGAGGTTGGTGAACTACAACAGATTCCGGAACAAGGGTTTAAGAGCCTACAAATCGTTGAAACAGATACTCCAAAACGATCAAGTATTGACATTGGACAATTTGAAATCAATCAATAGAGTCAGGAAACGACTTGCATCTAATATAACGAAACAGAAATTCCCACCTGACCACTGTGACCTCTATGTGAAATACAATGAAGAAGATGGTACGAGTGAAATACACACGGAGGAAGAATATAGCTctgacattaaaaaaaataccaatgtCAAGAGAGAAAAATGTGATGACATTGAAGATGATGAAAGGAATCAAAGTGAATCAGATGATTTCCACGCCAACGATGACATCGAGAATGACAACAAGTTATATTATGAAGTagaaatcaaaaagtttgatAAAAACGATGTCAATGTTGCTATGAATCCTGATGTATCCGATGCTATTCATAACGAGGACGTCGTTTTAATGGTTGTGAAACAAGAGAATGTAATGCCAAAAAGAAATGTCGGACAATCGAGTTCCAAAAGCAAAATACTTAAAGCCAGCATTCCGAAACccaaaaagaagaagaaacctGAATCATATGTTCCTAAGCCCAAAAAACAGGTCCCAATTGGCAAATTTTTCACAAAGACAGTATTAAGTTACGAAGAACAGTTAGCCGATATACAAAGCAGACAGTACACTGAACATTACAAGTCATATAGATACAAGTGTGACATATGCTTCACGGGACGCTGGTCTCTCTTCACTTACAATCGACATATGGAAAAGCACACAGATaaatacgGAAAATTAGAGTGCGCCATATGCGGGTTGCGGAATAAAACGCGCACGCAGCTGCGGCTGCACGTGCGAGCGCACGCCGAGAGATACAACTGCACGCGGTGCGACTTTGTCACCACCTCGAGCCAACTGGTGGAGCATCACGCACGCTGGCACAGCGGGCAGGCCTTCAGCTGTCCACACTGCGAGGCCAAGTTCAGGAAAAAAAGCACATACTTCTCGCACGTGCGGCTAAAGCACCCTTCAGACTTTGCGTGCCCGCTGTGCGGTTTCTGCTTCGTCAGTGAACGCGGTGTGAAGATCCACCTCATGATGATCCACCAATCCGAAGACGTAAACAACTTGTCCGGTCCGACGTGCGAACAGTGCGACGTGCGGTTCGCGTCTGAGGATGCGTACAACACGCACATGTCGGTGTCGCCCAAACACGTCAGTTCCGGCGTACCCATGCGGAACGAGTCCCATTACGAGCCTAGAATACGCCGTCCCCGGGACAAGCCGCAGTTCACGCCTCGAAAGCGCCGCGTTCTGAAAAAACCCTCCACCACGTCCCAGGAAGCTCATCCCGGGGTCAAGCCAAGTCCCGGGAAGGGTCGCCCCCGGAAAACATCCGACAAGTCCCAGGACGGCGGGCCTGCTACCAAGCAAAGCACACTGTGTGATATCTGCGGGAAAAGTTTCCAGGGTCCCTGGGCGCTCGACCAGCACATGAACATGCACACGGGCGCCAAGCCGTACAAGTGCGACTTCTGCAACAAGAGCTACTTCAGCCAGATGAGCCTGAAGTACCACCTGCGCTCGCACAGCGACCTCCCGCGCCCCTACTCCTGCAGCGTGTGCCACAGGGAGTTCTCCTTCTGGTCGAACCGGCAGCGACACATGCGGATCCATAACCCTGAAAGGCCGTGGTTCACGTGCAACTTGTGCGACAAGTCCTTCACCTCCCTCACGTCCAAAGCCAAGCACGTGGCGCACGTTCACGACAAGGTGCCGTGGCCCAAGCGGAAGCGACCGCGGAGAGTGGCGCGCAAGCGCAAACACAGCGACGACGGCAGCGACTGGGGCGCCAACATGGCGGACTCCGATGACGCCAAGATGGCGGACAGCGATGACGCCAAGATGGCGGACACGAATGACGACAGTGACGGTGGAATTTTTGGtgcataa
Protein Sequence: MKCCVPLCRSTGDNHPITVPVQENQEWITFNRFPATPKQRAAWLEMLGLIESDLPPGAVVCSEHFKRNDFIVMYDGNVKLKKDALPLQFCMICLASDDSKMYPMDQNHLGKAYTSITGNSVTHIRDKIKTSPRVCVECAQRLVNYNRFRNKGLRAYKSLKQILQNDQVLTLDNLKSINRVRKRLASNITKQKFPPDHCDLYVKYNEEDGTSEIHTEEEYSSDIKKNTNVKREKCDDIEDDERNQSESDDFHANDDIENDNKLYYEVEIKKFDKNDVNVAMNPDVSDAIHNEDVVLMVVKQENVMPKRNVGQSSSKSKILKASIPKPKKKKKPESYVPKPKKQVPIGKFFTKTVLSYEEQLADIQSRQYTEHYKSYRYKCDICFTGRWSLFTYNRHMEKHTDKYGKLECAICGLRNKTRTQLRLHVRAHAERYNCTRCDFVTTSSQLVEHHARWHSGQAFSCPHCEAKFRKKSTYFSHVRLKHPSDFACPLCGFCFVSERGVKIHLMMIHQSEDVNNLSGPTCEQCDVRFASEDAYNTHMSVSPKHVSSGVPMRNESHYEPRIRRPRDKPQFTPRKRRVLKKPSTTSQEAHPGVKPSPGKGRPRKTSDKSQDGGPATKQSTLCDICGKSFQGPWALDQHMNMHTGAKPYKCDFCNKSYFSQMSLKYHLRSHSDLPRPYSCSVCHREFSFWSNRQRHMRIHNPERPWFTCNLCDKSFTSLTSKAKHVAHVHDKVPWPKRKRPRRVARKRKHSDDGSDWGANMADSDDAKMADSDDAKMADTNDDSDGGIFGA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00801984;
90% Identity: iTF_00801984;
80% Identity: iTF_00801984;