Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000182.1:1009453-1013364[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.052 2.8 8.9 0.4 1 23 197 219 197 219 0.98

2 10 2.5 1.3e+02 3.6 0.5 2 23 246 268 245 268 0.86

3 10 0.00074 0.039 14.8 1.5 1 23 289 311 289 311 0.98

4 10 0.00011 0.0057 17.4 1.3 1 23 315 337 315 337 0.97

5 10 6.9e-05 0.0037 18.0 0.2 1 23 342 365 342 365 0.97

6 10 0.036 1.9 9.4 1.6 1 23 371 394 371 394 0.94

7 10 5.5e-05 0.0029 18.3 2.5 1 23 401 424 401 424 0.98

8 10 0.002 0.11 13.4 4.3 1 23 430 452 430 452 0.99

9 10 3.3e-06 0.00017 22.2 2.8 1 23 458 480 458 480 0.98

10 10 2.8e-05 0.0015 19.2 2.1 1 23 486 508 486 509 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.052	2.8	8.9	0.4	1	23	197	219	197	219	0.98
2	10	2.5	1.3e+02	3.6	0.5	2	23	246	268	245	268	0.86
3	10	0.00074	0.039	14.8	1.5	1	23	289	311	289	311	0.98
4	10	0.00011	0.0057	17.4	1.3	1	23	315	337	315	337	0.97
5	10	6.9e-05	0.0037	18.0	0.2	1	23	342	365	342	365	0.97
6	10	0.036	1.9	9.4	1.6	1	23	371	394	371	394	0.94
7	10	5.5e-05	0.0029	18.3	2.5	1	23	401	424	401	424	0.98
8	10	0.002	0.11	13.4	4.3	1	23	430	452	430	452	0.99
9	10	3.3e-06	0.00017	22.2	2.8	1	23	458	480	458	480	0.98
10	10	2.8e-05	0.0015	19.2	2.1	1	23	486	508	486	509	0.95

Sequence Information

Coding Sequence: atgaatgaaAGTGAAGACAACACGAAATATGGTGAATGCCGGTGTTGTTCCGCGATGGGCCACCACCGCGACGTGATGAAGGAGTATGAGTGGAACGGCGCAAGAGaagtttatttcaaaatatttttggagTGTTTCAATGTGTTTTTATGTACAAGAACCGGTAAGGGCAACCTGATCTGCACATCCTGCGTGCTGAGGCTGAGGGATGCCAGCAGCTTCAAGAAGATGGTGCTGGAAGCTGAGCTGAAGCTGGCCAGATGTGAGATGAAACAAGAAAATGCTGGGAATGACGCAATGGACCCGTCAGCAGTATCTTCAATGCTTGTTGTGGAAATAAAGAGTGAACAACCTGACCTGAAGGTGGAATCCAGCGATGCGGAGCACAATGATGGGGAATCTGATGATGATTCCATTCCAGAGCAGGATGACCCagATACAGCAAAGGAATACAAAGACTCAATACGTCAATCGCCTTGGCAAATAAGAAATAACAACAGGAAGGAAAAACTAGCGTATATTCACAACACTACCCTCATTATCGACAACTCTAACGTCACTCCATTCAAACCCAAATACCAGAACGGCTTCCCCTGCTTCTACTGTTCGGTGGCGTTTCAAGAACTACCCGCAATGCGACAACATCAAAAAAAGCATACGAAAACCGAACTTAAGACTGTTTTAAGTGCCCAAGGAGCTGAAGCCTTTATAGTGAACGTCGACGTCACAGACCTGAAGTGTACGATATGCAACGAACAAATGCTGACACTGACAGAACTCAAATCACATTTGGCCAAAAAACATGACAAGAAATTTCAGGATTGTCCCGACCGCATCGTCCCGTTCAAATTAACTCCGAACATGTTTGAATGTCAGGTGTGCAAATGCAATTTTGAAACATTTGGGGCGATGGAGCGCCACATGAATGTCCATTTTCGAAACTACGTGTGTAAAGAGTGTGGGACGGGCTTCGTTACTAAAAGTCGTTTTAAAGTGCACTCAAAACAGCACGATGAGGGTAGTTTTCAATGTGAGATGTGTAAAAAAGTGTATGCTACCCCCCTGAAGTTAAAAAATCATGTAAACATCGTTCACAAAATGGTCAAAAGGTTCAAATGTATGAAGTGTGACGAACGCTTCACGGAGTATTTGAAGCGACAGAAGCATATGGAGGAAGTTCATGGTGCAGCGAAGCTAGAATACAAATGCAAGGTCTGTGACAAGATATTTGACAGACAAACCCGATTGTCCGCTCACAAAAAGCGGTATCATTTAAAACAGAAAGATTACCAATGCGAACTGTGTTCGTACACCTGTTATTCAAACTTTACGTTAAAACTGCATATGATAAAACACAACGGGGAGAGGGTACACGAATGTTCTGTATGCAAAAAGACATATGCGAGAAAGAGAACGCTGCAAGAGCATATGCGGATACACAATAACGACAGACGCTACGCATGCCAAGTGTGTGGGCAAGCTTTTGTACAGAATTGTAGTTTGAAAGGGCATATAAAAACACACCATCCCGAATTGCAAGTGTTATAA
Protein Sequence: MNESEDNTKYGECRCCSAMGHHRDVMKEYEWNGAREVYFKIFLECFNVFLCTRTGKGNLICTSCVLRLRDASSFKKMVLEAELKLARCEMKQENAGNDAMDPSAVSSMLVVEIKSEQPDLKVESSDAEHNDGESDDDSIPEQDDPDTAKEYKDSIRQSPWQIRNNNRKEKLAYIHNTTLIIDNSNVTPFKPKYQNGFPCFYCSVAFQELPAMRQHQKKHTKTELKTVLSAQGAEAFIVNVDVTDLKCTICNEQMLTLTELKSHLAKKHDKKFQDCPDRIVPFKLTPNMFECQVCKCNFETFGAMERHMNVHFRNYVCKECGTGFVTKSRFKVHSKQHDEGSFQCEMCKKVYATPLKLKNHVNIVHKMVKRFKCMKCDERFTEYLKRQKHMEEVHGAAKLEYKCKVCDKIFDRQTRLSAHKKRYHLKQKDYQCELCSYTCYSNFTLKLHMIKHNGERVHECSVCKKTYARKRTLQEHMRIHNNDRRYACQVCGQAFVQNCSLKGHIKTHHPELQVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00953834;
90% Identity: iTF_01092378;
80% Identity: -