Hsem002389.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- HIVEP1
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000012.1:289027-296801[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.00019 0.01 16.6 0.5 1 23 145 167 145 167 0.98 2 10 0.0034 0.18 12.7 0.8 6 23 178 197 173 197 0.90 3 10 0.0013 0.07 14.0 0.0 1 20 432 451 432 453 0.94 4 10 3.9e-06 0.0002 21.9 2.0 1 23 1196 1218 1196 1218 0.99 5 10 0.18 9.4 7.3 4.8 1 23 1224 1252 1224 1252 0.83 6 10 0.00076 0.04 14.7 0.7 1 23 1638 1662 1638 1662 0.92 7 10 0.00037 0.019 15.7 0.3 3 23 1746 1766 1745 1766 0.97 8 10 1.5e-05 0.0008 20.1 0.9 2 23 1913 1934 1913 1934 0.97 9 10 0.0004 0.021 15.6 1.5 1 23 1940 1964 1940 1964 0.92 10 10 0.0019 0.099 13.5 2.6 1 23 1985 2009 1985 2009 0.93
Sequence Information
- Coding Sequence
- ATGCCGCTAACACAAGAAAAACGTTTGGATAATAATTTCTCTAACAACAATGACAACAGCTATCTTCATAAGAAGTTCAAAAAAATGGCATCTACAATGTCTATGCTTCCGGGCAGTTCAATTAAAGGGGAAGAAAGTGGATATCAAGAAACCAGTCTTTTACAAGTTACTAGTAGTTCTACTATTACCAACGGAAGTATTGCAGCAGCTCACCcagaaatagaaaaaattaaGGATATATACGACAAACGCAGCATGGATGTGGAGAAAAATGTACAAACTAATTTTAATGATGAGAACTTTAGGTTAAGTGATGTAAATAGTTTTGTTCAAATACCTGGTAAAACCAGTTTTTCtgaagaatttttaaataagaCTGAAAACCTTGAAAATGATTTTATAAGGGAATCTTATAGTGGAGGTGCAGGGCGGTATATATGCCCATATTGTAAAATATCATGTGCCAAGCCTTCAGTTCTACAAAAACATATCAGAGCTCATACAAATGAGAGACCGTATCCATGTATACCTTGTGGATTTGCTTTTAAAACAAAGTCAAATTTATACAAACATCGAAGGTCAAGAACGCATGCTTTACGATTACAAGGAGCAGATATTGCCAACGCAattaatgatgatgatttgTCAGGTGATTCCGAAAGTGACACGTCGATACCACCAACATCCTTATCAGGTTCCGACAGGGATCAAAGTTCGGATACTTCAATGATTCGTTCAGAAAGGAGACCTTATGAATTTTCATCTCCAGAGCTGCCAAACGAATTATCGTTTGGTAATAATAAGTCGTTACACACGACTTCTAATTTAAATGATAACAAGTCGAAGGCAATTTATAAACCCAAGTTTAGAGCAGCTTTTTATCATGGAATGGATGAGAAAGATAAGATAAAAAAGACTATTTCACAGAATGCTGACTTTCTTACAGAACATATCTCTAAAATAATATCAGACAATGAGGCCATTGTTGATGTTATTGAAACCCCTTTACAAAAAAAGTATggcaaaattaaacaaatagcGGAAAGTAAACAATTCTTAAACGACATGGAAATTCCACCAGAATTGGCACcattaaatttaacaaaaacttgtTACGATACAGACAGTTTGGTAAGAAAGAGGTCTCACTCAGAAAGTTTTGCTCAGATTCTAGAAGATCAAAAGCATCCACTTAATCCGGAGGGTTCTATAATTAAAGATCTTTTACTTAAAACAAAGGCTAATGGACTTAATCATGCGACAACTGAACTAGTTGATGGGTTGGGACCACTCTATATTTGTCCTGTATGTCAAATAGTATACAGAAGTGCAGATAATTTAGAAGTTCATAGGTTGTACTATTGCAAAGGTGCCCTTTCAAACAATTCTACTGAAGTAAATTGTCCtcagaaagaaataaaaagtgCAAGACCTGAAAATATATTTGTAAGAAGTAATTCCATTAATGTTCGATTGCCTGAAAAAGTTATGACTCCAGTCTCCAGAATAAATATTTCAACCAAGTCACCACCTTTGAAAAGTAAACCCGATAATCTTGTGATATTAAAACCAGATTGTAATGACATAATTGCCCCTTTGCCATCTCCAGGTCCTTTACTTGGTAACACGAGACTTGTAGATTCTAGATTACCATCTGAATTCAATAAGAAGACTGAGACGTTAAAAATAAGGCCTAAAGAATCTAGTCCAAAGCGACGGCTTGATAGCAGATCGGAAACATACAGCCCACGACTACTTGATAACTCATCACCTCGGTCTACAGACTTATATTCTCAGTCTAAAATGAGATGTATGGAAATAAATGCATCTGCTCTGAGATCAATGGAGGAAATGTCACCACATATAAGGCACAACTCTACATCTCTTCAAATGTTCGGAGGTGAAGTGAAAATAGTCGATCACTCTGGCAGTACGACAACTTTGCGCATCGAACCGAGTAAAACTCAACTATCGCCAATTTTAATACATCAAAATCTTTCACCTTCAAAGTACGCTAATGACTTAGAAGCAAGTAGCGTTGTCGTTAGATCAGGTCTTCATTCTGGAGGCACAATTGTGCATAATCCTCCTACACCAAAAGATACTGCAAACACGTCTCAGATTCAAGCCACCAGAATTGCAGTGTCAACACCAACCGCCCAGAACTTGCTAAGTATTCATGACATAACTCACTTCCAGTTTCCACCATTAAGTGCGATTACAGCATATAATCCCTTAACTCTGCCTCCGCTCAGTCCATCTTCGTCACCTAATGGCGCAACAACAATTTTTCACGGCGGCAAACTGATACCTCATGTCCCAGGAATACCTGGGCCCAATACACCTGGCTTACTAGTCGGGAATAAAAGCCCGCAAATGAAAAACAACGAAAGTCTCAACAATGCGACCAAGTCAGAGAATATTTCAGATAGTTTAACATTCAGTGTGCATAATAGAAAAGGAAGTACAAATTACGACAGAGTTTTTAATTCTAAGAGTCCTAATACAAAATCTTCTAGCAACGAACTAGAAAGacataatcaaaataataattacaatgcAGAATTACAAAGCATTTCCACTGTGCCaattataaaaatcaaacaCGTAGACGAGCCCGTCGCTACGTCATTTCCAGCTAACAATAATATCAGAGTAGCTCTGCGAACTGAAGGTGTTAAACGAAATGCTGAAGGCTTTCCAAGAATGCctgtattaaaagaaaattctaattacttatttattaaaagtaaaatcaaGGATTCTAATATTCCTTCAAAAAATGCTGAAAATAAACCTGAAAATGAAATcaagaattttaattttgagaaTCTAATAACTAAAGTAGAAATATATAACAATCAAATTCAAAGTTCTTCGGAAGTCCAGAAGAATTGTAACACATCTGAAACTTGCGCCACATCACTTCAAAACGAAAGGTCGGAAACATCTTACTTCCAAAAAAATCTAGCAGCAAAGACACTTAGCGATGAAAGAAAGCCAAAGTTTTTGAGGCCATCAACATTACCTCTAAAACCCGGTACTTTTACGCCAAAAAAACACCATGGGATTACACCAAATGCAAATACAATGCCATTGATATCTCCTGAAACTCCTCGTCCAGCAAAAGCTTATGGCCAACTTTATCTAAATGGCAATGCTTACACATATTTGGGTTTGAAATGCTCGACAAAAGTTTTTTACTGCACTATCAATCGTCCACAGCCAACTTACGTACCAAATCAACATTTCCTATCGATGTATAGTAATTGGCAGTTATTATCTGAGCTGACGCCAGACCCGCTGGGACTGTCAGCATCGTCTGCTATGTCTCTATATGACTCACGTCATCGACCGCAAAACGTGGCTGTAGCTGTGATTAAACAGGATCTCATATTGACTCATTCATCGCAATGGAATAAAAATTCGAAGGACAATAAACAGatTATACCCTTTATGGATACAAAAAGGTCGGAAGAATTGAGAAATATTGCTGAAAATATTGCAACATCTAAAAAAGAAGTAACTGGTGGATTCGAAAGTAATGAAGAATACACATATGTACGTGGTCGTGGCAGAGGACGCTATGTTTGTTCTGAATGCGGAATACGATGTAAAAAGCCTTCTATGCTGAAGAAACACATTCGAACGCATACTGATGTCCGACCTTACACATGCGTTCATTGCGTTTTTAGCAGACATTTCAGCTTTAAAACAAAGGGCAACTTGACAAAACACATGAAGAGTAAAGCGCATTACAAAAAATGTTGCGAGTTAGGAATAAATCCACATGAAGGGAATGACGGCGAAGGTGTCGAAATGGCGCAATGTTCAGGTGAAACTGACGACGAAACTGATTCGGAAGGTGATGAGGGGAACGAAGGAGAAACGGAATCAAGTGatACAGAGATTTGTAAATCTCGACTGCCCGAACACGAAGCTGCTCACTGTTTACTATCTTTAGGTGGAAGTAGGCCGGCTACGTCGGCGACACCAGGCCTAATAACTAGTGCCAGGCCTACTACTTATCCTTATACACCTATCTCATTAGAAAGTGAGGCAGATAATACTCTGGAGAAAGTACCAACCATAGGAACTACTATGGCTGATTCAAGTATGGACGTGGATAACGAGCCAATGGATCTAAGCAAAAATGAACTAAGAGCACCCAATAACGTACCAGAAATACCAACTGCAAGAGAATCAAGCGTTTTGGCATCATTAGCTTCCAATACAGCTAAATTACCTCAACATCAAAGCCAGTGGGTCAATGGCGAGCCAATGCTTCACACTTATTTAACGGAACGAGCTTTATTAGAttcgaaaataaaacaaagtcagcTAACTTGTAATcctaaaacaagaaaaatagaTTTGGAGACCTCTATGTTTTCAAATAAAGATGGTTATGAAAAAGGTTataaaaaacctttaaatacttttacaataaaaatcaGTACTAACGATATGATAAATAGGGTCTCTGTTACTAAAAATGATACTGTCATTGAGGAAATTTCACAAAGTTCGATGATGACTCATAACAGTGAAAATATAACTAAGTCCGCAAGTACTCCAAATTCAGAAAACGctaaatatatagaatattCAAAACATGCCCGAATTAAACATATGAAAACGTTTGATAGCTCCCTAGATAATCATTCAGATATATCAAGTGACGAAAGTAACGGGAGTAAGATTTATGTGGAAGAAAAAGCAAGAACAGACGAGCCTCCTGAAGTCAATGAAATAAAACCACCTCCATCAGAATTTGATTCAGGGTCATCGAATGTAGGTACTGAAGGAACGGACTTCGATGGCACGTCTTATACACCTGAAAAACTAATGGAAGATGACCGGCGcgtgtgttttttttgtaatgaaacATTCACTAAACCACCGAGGCCGTTTAGATGCAGTATATGCGCTGTAAGTTTTCGAACGAGAGGCCATTTAATGGTGCATGAGCGCTCAGCTtcgcataatattaaaatttcaatgGCACCTAATTCTGAAAATGCCAAACACGTGGTGTCGGAATATTTAAAACATTCCCGAATAGATCCTGTCAAATCTCTTGATGATGTTCAAAATAATTCAGATATATTAAATGATGAAAACGATGGGAACAAGATGCCTTCGGAAGAAAAACTAAGAATGGATATTGAGCCCATGGCATCTAAAGATATAACTGAAGGAAAAGATTTCGAGATAATAGATGAATGGAAAGATTGTGATTTTTGTAACAAAATGTTTCGTGAACCGGCGCAATTAAAATTGCATCTTAATATACATTACATGGAGAGGCCGTTTAGATGTAGTGTATGCGCTGTTAGTAATAGGACTAAAGGGTATCTTCAAAAAAATGATCGTTCTGCGTATCATAGTGATAAAGCTACGAAGAAACCTAATTCAGAAAACGCTAAATATGTAGTTTCAGAATATTTAAAACATGCCCGAATAAATCccataaaaactttggatgaTCCTTTACAAAATCATTCAGATATAACAAGTGACGACAGTAATGCGAGCAAGGTCCCTTTGGAAGAAAAAACAAGAACAGACGACAGTTTAGAAGGTGACGGAATAAAATTACCTCCAACAGAATATGATTCTGTAGCGCCTAAAGTAGTGATTGGGGTCGGGGGTGTAGCATTCAAAGTAACCAAAGGAAAAGATTTTGAAGGCACTTCTTACGCTCCTGGAAAACTAATGGAAGATGGACGAAGAGTTTGTGATTTCTGTAACAAAACGTTTACAAAACCATCGCAGTTAAGGCTACATCTGAATATACATTACATGGAGAGACCTTTTAGATGTAGCGTTTGCGCTGTTAGCTTTCGGACGAGAGGCCACCTTCAGAAACATGAGCGTTCAGCCTCTCATCATAATAAAGTTTCAATGACATCTACATTTGGAGCAGCAACATCATTCAACCCGCGACCTTTTCGCTGTTCAGATTGTAATATAGCATTTAGAATACATGGACATTTAGCCAAACATCTTAGAAGTAAAATGCATGTGATGCGTCTCGAGTGTTTGTTTAAACTACCGTTCGGTACTTTTACCGAAATTGAGCGAGCAGGCCTCAGTTTAACGGATATCGACACGACAGATTGTGCCAGTTCATTAGCCAGTCTTCAGTCGCTCGCAAGGAAGTTGCACGAAAAAGACCCGACGAAGCTGGAATACAGGGAACCAAGTGGTTCGCTGCCGGCTTTACCTCCGACAGGCAGGGACTCTTCGGAAGACGAAGACTCGGGTGTGATTACAGAAAAGACGTGTGAAAGTGTAAATGATTGCGCGATAAAgactattgaaaataataaaggtCATGATGCCGAACTACGAGTTAATTATAGTGCCACAGATAATTAG
- Protein Sequence
- MPLTQEKRLDNNFSNNNDNSYLHKKFKKMASTMSMLPGSSIKGEESGYQETSLLQVTSSSTITNGSIAAAHPEIEKIKDIYDKRSMDVEKNVQTNFNDENFRLSDVNSFVQIPGKTSFSEEFLNKTENLENDFIRESYSGGAGRYICPYCKISCAKPSVLQKHIRAHTNERPYPCIPCGFAFKTKSNLYKHRRSRTHALRLQGADIANAINDDDLSGDSESDTSIPPTSLSGSDRDQSSDTSMIRSERRPYEFSSPELPNELSFGNNKSLHTTSNLNDNKSKAIYKPKFRAAFYHGMDEKDKIKKTISQNADFLTEHISKIISDNEAIVDVIETPLQKKYGKIKQIAESKQFLNDMEIPPELAPLNLTKTCYDTDSLVRKRSHSESFAQILEDQKHPLNPEGSIIKDLLLKTKANGLNHATTELVDGLGPLYICPVCQIVYRSADNLEVHRLYYCKGALSNNSTEVNCPQKEIKSARPENIFVRSNSINVRLPEKVMTPVSRINISTKSPPLKSKPDNLVILKPDCNDIIAPLPSPGPLLGNTRLVDSRLPSEFNKKTETLKIRPKESSPKRRLDSRSETYSPRLLDNSSPRSTDLYSQSKMRCMEINASALRSMEEMSPHIRHNSTSLQMFGGEVKIVDHSGSTTTLRIEPSKTQLSPILIHQNLSPSKYANDLEASSVVVRSGLHSGGTIVHNPPTPKDTANTSQIQATRIAVSTPTAQNLLSIHDITHFQFPPLSAITAYNPLTLPPLSPSSSPNGATTIFHGGKLIPHVPGIPGPNTPGLLVGNKSPQMKNNESLNNATKSENISDSLTFSVHNRKGSTNYDRVFNSKSPNTKSSSNELERHNQNNNYNAELQSISTVPIIKIKHVDEPVATSFPANNNIRVALRTEGVKRNAEGFPRMPVLKENSNYLFIKSKIKDSNIPSKNAENKPENEIKNFNFENLITKVEIYNNQIQSSSEVQKNCNTSETCATSLQNERSETSYFQKNLAAKTLSDERKPKFLRPSTLPLKPGTFTPKKHHGITPNANTMPLISPETPRPAKAYGQLYLNGNAYTYLGLKCSTKVFYCTINRPQPTYVPNQHFLSMYSNWQLLSELTPDPLGLSASSAMSLYDSRHRPQNVAVAVIKQDLILTHSSQWNKNSKDNKQIIPFMDTKRSEELRNIAENIATSKKEVTGGFESNEEYTYVRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPYTCVHCVFSRHFSFKTKGNLTKHMKSKAHYKKCCELGINPHEGNDGEGVEMAQCSGETDDETDSEGDEGNEGETESSDTEICKSRLPEHEAAHCLLSLGGSRPATSATPGLITSARPTTYPYTPISLESEADNTLEKVPTIGTTMADSSMDVDNEPMDLSKNELRAPNNVPEIPTARESSVLASLASNTAKLPQHQSQWVNGEPMLHTYLTERALLDSKIKQSQLTCNPKTRKIDLETSMFSNKDGYEKGYKKPLNTFTIKISTNDMINRVSVTKNDTVIEEISQSSMMTHNSENITKSASTPNSENAKYIEYSKHARIKHMKTFDSSLDNHSDISSDESNGSKIYVEEKARTDEPPEVNEIKPPPSEFDSGSSNVGTEGTDFDGTSYTPEKLMEDDRRVCFFCNETFTKPPRPFRCSICAVSFRTRGHLMVHERSASHNIKISMAPNSENAKHVVSEYLKHSRIDPVKSLDDVQNNSDILNDENDGNKMPSEEKLRMDIEPMASKDITEGKDFEIIDEWKDCDFCNKMFREPAQLKLHLNIHYMERPFRCSVCAVSNRTKGYLQKNDRSAYHSDKATKKPNSENAKYVVSEYLKHARINPIKTLDDPLQNHSDITSDDSNASKVPLEEKTRTDDSLEGDGIKLPPTEYDSVAPKVVIGVGGVAFKVTKGKDFEGTSYAPGKLMEDGRRVCDFCNKTFTKPSQLRLHLNIHYMERPFRCSVCAVSFRTRGHLQKHERSASHHNKVSMTSTFGAATSFNPRPFRCSDCNIAFRIHGHLAKHLRSKMHVMRLECLFKLPFGTFTEIERAGLSLTDIDTTDCASSLASLQSLARKLHEKDPTKLEYREPSGSLPALPPTGRDSSEDEDSGVITEKTCESVNDCAIKTIENNKGHDAELRVNYSATDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01092342;
- 90% Identity
- -
- 80% Identity
- -