Basic Information

Insect: Hipparchia semele
Gene Symbol: Znf518a
Assembly: GCA_933228835.1
Location: CAKOGE010000178.1:1050437-1067522[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00098 0.052 14.4 0.6 1 23 180 202 180 202 0.99

2 11 0.0013 0.068 14.0 1.9 1 23 209 231 209 231 0.99

3 11 3.3 1.7e+02 3.3 0.5 1 9 235 243 235 258 0.73

4 11 0.011 0.57 11.1 2.9 1 23 265 287 265 287 0.98

5 11 1.3e-06 6.7e-05 23.4 5.8 2 23 294 315 293 315 0.97

6 11 0.0011 0.058 14.2 1.3 1 23 321 344 321 344 0.95

7 11 8.3e-06 0.00044 20.9 1.1 1 22 349 370 349 374 0.93

8 11 0.00029 0.015 16.0 0.1 1 23 382 405 382 405 0.96

9 11 0.00064 0.034 14.9 0.0 3 23 413 434 412 434 0.96

10 11 3.3e-07 1.7e-05 25.3 0.4 2 23 443 464 442 464 0.97

11 11 0.025 1.3 9.9 0.1 5 23 473 491 470 492 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00098	0.052	14.4	0.6	1	23	180	202	180	202	0.99
2	11	0.0013	0.068	14.0	1.9	1	23	209	231	209	231	0.99
3	11	3.3	1.7e+02	3.3	0.5	1	9	235	243	235	258	0.73
4	11	0.011	0.57	11.1	2.9	1	23	265	287	265	287	0.98
5	11	1.3e-06	6.7e-05	23.4	5.8	2	23	294	315	293	315	0.97
6	11	0.0011	0.058	14.2	1.3	1	23	321	344	321	344	0.95
7	11	8.3e-06	0.00044	20.9	1.1	1	22	349	370	349	374	0.93
8	11	0.00029	0.015	16.0	0.1	1	23	382	405	382	405	0.96
9	11	0.00064	0.034	14.9	0.0	3	23	413	434	412	434	0.96
10	11	3.3e-07	1.7e-05	25.3	0.4	2	23	443	464	442	464	0.97
11	11	0.025	1.3	9.9	0.1	5	23	473	491	470	492	0.92

Sequence Information

Coding Sequence: ATGGAGGGGATATGCCAGACCTGTCTTATAGATGGTGTTCACATAATACCTATGTCCGTTTCAGAGATGGAAAGCTATCGCTTATTTGTTGCTAAGGCATCGGAGAAACTCCACAAAATTAAATCCAATCATTTGTCATCATCTAAAACTTTATGTTACTATGTTGGTCCAGAAACTGATTTAAAACCCAAAAGTGAGTTCGAAATATCTAATAAATCATCAtcggatgatgatgatgtaccATTGGTGAAGCTCAGCCAGAATAATGATTACGATTGTAACAACTATGATTATTATGTAGAGTTGgataataatatagatacaaacatagataatataaaacaagaaacaaacacacagacagagGTAAAAAGGAAGCAGAAGAAGTTTAGAAGGAAAAAGAAGGAAGCCAGAGAAGGCTTTTCTTCTAGAATGGTCATGGAGACAGAGGAATACAAAGTCTTAAAGTTGACTAAGGAAGAGATTGTAGATGAAATGAGACAACAATCTCAGAGTGACAAATATAACTTAATGCCGTACAAATGCGAGAAGTGTGTGAGGGGGTTTAACTTTGAAGACGTTTTACAGAGCCATATGGAGAAACATTCTCCGgaaaATGGTTCATTCCAATGTGAAATATGCACACAGTATTGTCCGAGCAGAGTGTCTTTGCGAGGGCATATGAAGTCGCACTCTACGCGATATAAATGCAAGCTGTGCGGTCTGGTCCGTCTGTCGCGGCAGCACATCCTCGAGCACTACTCGCTCCAGCACACGGGTTCGGCCGCTTTATACACTTGCCCCAAATGTGACCATACTTCCAACAAGAGAACAGTGATGCAAAGGCATGTGAGACTGCACTCTGCGAGCGTGCCTCTCAAGTGTCACTACTGTGGCAAATGCTACAAGACTAAGGACTCATTGaggatacatattatGAAACACGATCACAAAAAGCTGCATCAGTGTGAGCTATGCACGAGTACGTTTGTGTACGCGGCGCAGCTGTCAAAGCACATGCAATTTGTACACGTGCTAAAGGACTATTACTGCGTGGAATGCGACATCACGTTCAAATCCAAGGACAACCTCAAACAACATTTACAAAGAGCCAAACGCCACCGAAATGACTCTTCCTACAAATTCGAATGCGGCCAGTGCCCGGAGAAGTTCATATCGGCGTCCACGCTGGCCACGCACCGCACGAGCGCGCACGGCGCCGCCCGGAGCGAGGCGTGCGCGCTGTGCCCGCGCGCGTACAGCAGCGCGGAGGCGCTGCGGTGGCACACGCGCCGCGCGCACTCCGCGCACGACAAGCCCAGGCTGCCCTGCCCGCTGTGCGACAGAATGTTCTCCCGCAAGTACGTGCTCCGCGtgcacatgcgcacgcacacgGGCGAGCGGCCGCACGCGTGCGAGTGCGGCGCCGCGTTCGCGCAGCCGGCGGCGTTGCGCGCGCACCGCGCCGCGCACCACAAGGTAAACAATCAGGCCGTCTTCACAGTGTTCTACTCCGCCACTTCTGTCTCCGTTGCACGCGATTCCATTGGAGACAACCTGGACACTTTTCTTGGTGGGGTGGCTCATACAGCGAGAGGCCTGGTCGGTGCAGTGGACACAGTAGCTGGTAGCATTACCAACGGTGCCGACAAATTAGTGCATGGACTAAAGGACGGATTGGTACGTATAGCTTGGGAACAGCTATCAAATGATCCTCCATGTGAACCGTGA
Protein Sequence: MEGICQTCLIDGVHIIPMSVSEMESYRLFVAKASEKLHKIKSNHLSSSKTLCYYVGPETDLKPKSEFEISNKSSSDDDDVPLVKLSQNNDYDCNNYDYYVELDNNIDTNIDNIKQETNTQTEVKRKQKKFRRKKKEAREGFSSRMVMETEEYKVLKLTKEEIVDEMRQQSQSDKYNLMPYKCEKCVRGFNFEDVLQSHMEKHSPENGSFQCEICTQYCPSRVSLRGHMKSHSTRYKCKLCGLVRLSRQHILEHYSLQHTGSAALYTCPKCDHTSNKRTVMQRHVRLHSASVPLKCHYCGKCYKTKDSLRIHIMKHDHKKLHQCELCTSTFVYAAQLSKHMQFVHVLKDYYCVECDITFKSKDNLKQHLQRAKRHRNDSSYKFECGQCPEKFISASTLATHRTSAHGAARSEACALCPRAYSSAEALRWHTRRAHSAHDKPRLPCPLCDRMFSRKYVLRVHMRTHTGERPHACECGAAFAQPAALRAHRAAHHKVNNQAVFTVFYSATSVSVARDSIGDNLDTFLGGVAHTARGLVGAVDTVAGSITNGADKLVHGLKDGLVRIAWEQLSNDPPCEP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -