Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000199.1:247671-258995[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.038 2 9.4 0.4 3 23 144 164 142 164 0.97

2 14 0.0024 0.13 13.1 2.8 1 23 284 306 284 306 0.99

3 14 0.00018 0.0094 16.7 0.9 1 23 312 335 312 335 0.96

4 14 0.02 1.1 10.2 4.8 1 23 340 363 340 363 0.94

5 14 2.4e-07 1.3e-05 25.7 0.6 2 23 537 558 536 558 0.98

6 14 0.00069 0.037 14.8 2.7 1 23 564 586 564 586 0.98

7 14 0.19 9.8 7.2 5.8 1 23 653 675 653 675 0.97

8 14 0.01 0.54 11.2 1.2 1 23 710 732 710 732 0.95

9 14 0.0016 0.084 13.7 2.1 1 23 738 760 738 760 0.96

10 14 0.017 0.9 10.5 5.1 1 23 769 791 769 791 0.99

11 14 0.00017 0.0091 16.7 0.6 2 23 838 859 838 859 0.97

12 14 0.048 2.5 9.0 5.6 1 23 876 898 876 898 0.96

13 14 1.9e-06 0.0001 22.9 0.5 1 23 904 926 904 926 0.98

14 14 7.2e-07 3.8e-05 24.2 3.1 1 23 932 955 932 955 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.038	2	9.4	0.4	3	23	144	164	142	164	0.97
2	14	0.0024	0.13	13.1	2.8	1	23	284	306	284	306	0.99
3	14	0.00018	0.0094	16.7	0.9	1	23	312	335	312	335	0.96
4	14	0.02	1.1	10.2	4.8	1	23	340	363	340	363	0.94
5	14	2.4e-07	1.3e-05	25.7	0.6	2	23	537	558	536	558	0.98
6	14	0.00069	0.037	14.8	2.7	1	23	564	586	564	586	0.98
7	14	0.19	9.8	7.2	5.8	1	23	653	675	653	675	0.97
8	14	0.01	0.54	11.2	1.2	1	23	710	732	710	732	0.95
9	14	0.0016	0.084	13.7	2.1	1	23	738	760	738	760	0.96
10	14	0.017	0.9	10.5	5.1	1	23	769	791	769	791	0.99
11	14	0.00017	0.0091	16.7	0.6	2	23	838	859	838	859	0.97
12	14	0.048	2.5	9.0	5.6	1	23	876	898	876	898	0.96
13	14	1.9e-06	0.0001	22.9	0.5	1	23	904	926	904	926	0.98
14	14	7.2e-07	3.8e-05	24.2	3.1	1	23	932	955	932	955	0.98

Sequence Information

Coding Sequence: ATGAATAATCCGCTGGCACCAGATGTGGATCCCTTGAGTACATATAATTTGAACAACTTTCCGATTTTGGATAATTTTGGAAATCCAGTGTTACCTTTTGGAAATCAATACCCATACACAGTGAAAGTGGAAGATTACCAGAATCCTAATTATTACAATGCTACCCCAGGAGTACCACCACCTAAATGTACTCAAGAAACGGAAGAAAACACTAGTTTAAACACTACTTTAGAAGATACCGGTAACGAAATGCAGACACAGGTCACAGATCAAAATAACGAAGACACAAACAACGTAAATAACACAGAAGAAGAAGACATCAAACCAGATATCACAGATAATAAATTGTTAaagggtaaaaaaattaaaaaagaaaggaGCAAATACTTTTCCGAAAAGATCAAGGAGAAAGATTTCAAATTCTACGGATGTTCCGTGTGTAATATCAACTTCAAGGAACTACATGAATTAgacaatcacgtagcaacacaTAAAGACAGACTGACGAGTTACGATTGGAGAGTCAAGAACCaggtaaagaagaagaaaatgaagaaggagttgaagaagaagaagaagttaatGAAGAATGTCAAGATGGAACCTGAAACTGCAGAGCTTAATATAGAAATTAAGCCAGAGGATGGATACATAGGTAACGAAAAAGCATCCGACTTTGTCAACAACACGGAATCAGACAACCAGAGTTCCAAGGAGAACAACGGAGAGATGGGCAAGAACACAAAAAACACAACGGAAGCCACCAACGAAAGCAAGAAACAAGATATGTCGACAACGGAAGCCTCGACGGAGACCACGAAACAGGATAAGTTGAACTTGCAGAAGATATACAAGTGCTTTGCGTGCCAGAAACAGTTCACGTTGAGTTATTATTTGAAACTGCACGTCAGATCACATACAGACGAGAAGCCGTACACGTGCGCGCAGTGCGGCCAGTCGTTCATCACGGCGAGCAAACTCGGGCGGCACAACAAGCGCTTCCACCTCGCCATCCGCTACCAGTGCAGGATCTGCTACAAGTACTTCTCCAGGTTTGAATTCTTAACCCGacattttgataaaaaacaTCCAGATGACAAATTGGAAGGGGAACCTTATGATTTCAACGCAATACTACCGTACCTAAAGGAATTGGAAGAGCAGTTGCGAGAGAAAACAGAAAAGGAGAAAGCATCATCAAAACCGGCCGATCCTTGGTTTGACTCCCTGGACGCTGAAGCCAAGCAGGAACCCGAAGCCAAGAACGAACCTGATGAAGTGAAAGAGGAAGTGGACAACGAGGGAGTATATGTGTCTGTGGTGATAGAACCAATCAAAGTTGACGTAGAAGAAGTGGAGGTTAAAGTGGAGGGGAAGGGGGAGGAGACATGTGGTGATAATGGGGCTGGTGATAACAGGGCTGGTGATAACGGtgctggtgatgatgatgatgacggaTTCGGTGGTGATGATATCAAAGATGAGGACTATGACATGAAGGATGAAAACCCCTCAGACGATGACTATTTCCCCTCAAACACCTGGGCTTCCAAACCAGCAGTAGACGAGCCCCAGCCCCAGAAGAGGGTGAACCCATCAGACAGAGTCAAGTGTCCGGTCTGCGAGAAGAAGTTCAGCACCCCCTCGTACATGAGGATCCACATGAGGACCCACACGGGGGAACGACCCTTCAAGTGCTACATCTGCAACATGGGCTTCATCACCTCCAGCAAGATGCACCGGCACGTGCTCACTCACCCAGAGTCCTGGGCAGATGATGAAGTCAAAGAGGAAAAGGAAGGCAAAGAGGAAGTTGACATCAAAACCGAAGAGGGAGAAGAAGCAAAAGGGGATGAGAGAACCAAGAGAAAGTTAAGAATGAAGAAGGCCCTGGCGAAGTTCTCCAAGAAATCGAAGAACATGGAGAAGACCAACAGGCTGTGCAAGAAAAGACCGCATTCGTGTGAATTTTGCCAGAAAAGATTTCTACATCTGGAGACATTGCAGGTGCACAGGAAGTCGCACGTGGGCGAGAGCGTGGTGTACAAGTGCAACTTCTGCCTGGTGGAGCACCCCGACGCGGCGGCGCAGCGCGCGCACGAGGCCTCCCACCAGGGCCCCAAGCCCTACCTCTGTACCGTGTGCGGCCGCGGCTATAAGAAGCGGGAGACCATGATCTACCACCGCAAGAACCACACGCCGGAGCGCGAGTTCATCTGCGACATCTGCACCAAAAGCTTCAACGCGTACTGCAAGCTGCAGCGGCACATTGTCAGCCACAGCACGCAGCGGTTCGTGCTGCGCTACGAGTGCCCGGTGTGCGCGCACATGTTCCACACCAAGTACCACGTGCAGATGCACCTCTCCACGCACCAGAAGGAGGGGCTAATCCAAGAGGAAAACCGCAACGAGATCCTCGCGATGGTGCTACAAAACGCGCGGAAAATACCAAAAACCGCAGACGCGCCCGCCGCACTCAGCGACGCCGTGCCCAGCGACGAGCGCAGCCGCGTGTGCAACATATGCGGAGAGgtcttCCAACACTTCTACTACCTAGAAGAACACCTAAAGAGCCACGGATCAAAAATCGCCATAGAAGATAGCGAGAAAGCCGAGGAGAAGAAACATGTATGTACCGTCTGCAACAAAGGCTTCAAACTGCACTACTACCTGAAACTTCACAGCTTCACACACACCAAGGAGAAACCGTTCATCTGCCAGCAGTGTGGCAAGGGCTTTATAACCCGGGGGAAACTCAAAAGACACATAGAAACTCACAGCGGACTCAAAAAATACCAATGTCATATCTGTTACAAATTCTTCACACGACCGAGCTACTTGCGTATCCACGTTAGGACTATCCATGGTACTCAGGATTACAATTTTAGGGCGGATAAGACTTGGGATCAATTCGGCGCTGATTTTGCCGCGTGA
Protein Sequence: MNNPLAPDVDPLSTYNLNNFPILDNFGNPVLPFGNQYPYTVKVEDYQNPNYYNATPGVPPPKCTQETEENTSLNTTLEDTGNEMQTQVTDQNNEDTNNVNNTEEEDIKPDITDNKLLKGKKIKKERSKYFSEKIKEKDFKFYGCSVCNINFKELHELDNHVATHKDRLTSYDWRVKNQVKKKKMKKELKKKKKLMKNVKMEPETAELNIEIKPEDGYIGNEKASDFVNNTESDNQSSKENNGEMGKNTKNTTEATNESKKQDMSTTEASTETTKQDKLNLQKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCAQCGQSFITASKLGRHNKRFHLAIRYQCRICYKYFSRFEFLTRHFDKKHPDDKLEGEPYDFNAILPYLKELEEQLREKTEKEKASSKPADPWFDSLDAEAKQEPEAKNEPDEVKEEVDNEGVYVSVVIEPIKVDVEEVEVKVEGKGEETCGDNGAGDNRAGDNGAGDDDDDGFGGDDIKDEDYDMKDENPSDDDYFPSNTWASKPAVDEPQPQKRVNPSDRVKCPVCEKKFSTPSYMRIHMRTHTGERPFKCYICNMGFITSSKMHRHVLTHPESWADDEVKEEKEGKEEVDIKTEEGEEAKGDERTKRKLRMKKALAKFSKKSKNMEKTNRLCKKRPHSCEFCQKRFLHLETLQVHRKSHVGESVVYKCNFCLVEHPDAAAQRAHEASHQGPKPYLCTVCGRGYKKRETMIYHRKNHTPEREFICDICTKSFNAYCKLQRHIVSHSTQRFVLRYECPVCAHMFHTKYHVQMHLSTHQKEGLIQEENRNEILAMVLQNARKIPKTADAPAALSDAVPSDERSRVCNICGEVFQHFYYLEEHLKSHGSKIAIEDSEKAEEKKHVCTVCNKGFKLHYYLKLHSFTHTKEKPFICQQCGKGFITRGKLKRHIETHSGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRADKTWDQFGADFAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -