Hsem007514.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- -
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000040.1:1631324-1651802[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 33 0.3 16 6.5 0.0 2 23 268 289 268 289 0.92 2 33 2.9 1.5e+02 3.4 0.1 5 21 297 313 295 317 0.90 3 33 2.9 1.5e+02 3.4 0.1 5 21 354 370 352 374 0.90 4 33 2.9 1.5e+02 3.4 0.1 5 21 411 427 409 431 0.90 5 33 2.9 1.5e+02 3.4 0.1 5 21 468 484 466 488 0.90 6 33 2.9 1.5e+02 3.4 0.1 5 21 525 541 523 545 0.90 7 33 2.9 1.5e+02 3.4 0.1 5 21 582 598 580 602 0.90 8 33 2.9 1.5e+02 3.4 0.1 5 21 639 655 637 659 0.90 9 33 2.9 1.5e+02 3.4 0.1 5 21 696 712 694 716 0.90 10 33 2.9 1.5e+02 3.4 0.1 5 21 753 769 751 773 0.90 11 33 2.9 1.5e+02 3.4 0.1 5 21 810 826 808 830 0.90 12 33 2.9 1.5e+02 3.4 0.1 5 21 867 883 865 887 0.90 13 33 2.9 1.5e+02 3.4 0.1 5 21 924 940 922 944 0.90 14 33 0.058 3 8.8 0.3 1 21 978 999 978 1003 0.92 15 33 2.9 1.5e+02 3.4 0.1 5 21 1040 1056 1038 1060 0.90 16 33 2.9 1.5e+02 3.4 0.1 5 21 1097 1113 1095 1117 0.90 17 33 2.9 1.5e+02 3.4 0.1 5 21 1154 1170 1152 1174 0.90 18 33 2.9 1.5e+02 3.4 0.1 5 21 1211 1227 1209 1231 0.90 19 33 2.9 1.5e+02 3.4 0.1 5 21 1268 1284 1266 1288 0.90 20 33 2.9 1.5e+02 3.4 0.1 5 21 1325 1341 1323 1345 0.90 21 33 2.9 1.5e+02 3.4 0.1 5 21 1382 1398 1380 1402 0.90 22 33 2.9 1.5e+02 3.4 0.1 5 21 1439 1455 1437 1459 0.90 23 33 0.37 20 6.3 1.1 2 23 1557 1579 1556 1579 0.84 24 33 0.0036 0.19 12.6 0.1 1 23 1585 1607 1585 1607 0.96 25 33 0.049 2.6 9.0 0.2 1 23 1616 1639 1616 1639 0.92 26 33 1.5e-05 0.00078 20.1 4.6 1 23 1644 1666 1644 1666 0.98 27 33 0.00011 0.0058 17.4 2.4 1 23 1672 1694 1672 1694 0.97 28 33 4.4e-05 0.0023 18.6 3.3 1 23 1700 1722 1700 1722 0.98 29 33 7.6e-07 4e-05 24.1 0.9 1 23 1728 1750 1728 1750 0.98 30 33 0.0025 0.13 13.1 3.4 1 23 1756 1778 1756 1778 0.98 31 33 0.73 39 5.3 3.8 2 23 1788 1811 1785 1811 0.90 32 33 0.73 39 5.3 3.8 2 23 1821 1844 1818 1844 0.90 33 33 0.3 16 6.5 0.1 3 22 1852 1871 1850 1871 0.93
Sequence Information
- Coding Sequence
- ATGGAAGTGTTTCTTTACAATTCCACGGTTTGTAGATTATGTGGTGAAGAAAACGATAATGGAAATTTACTATATTCCtgtgaagaaaataatcaaAACTTAAGTGAAATTATTAACTCATATTTACCTATAAAGGTGGAGGATGATGGAGAACTCCCTCGAACTATTTGCCCAGGATGTACTATTCAACTAGAAGCCACAGTTGAAtttcttaatttaataataaatgggCAGAAAGTGATAAGAGAGCTGTATAAGAGAGAGAGGGAATATAAACAGAGTATACTTAACAGTCCAGGTGCAGATGCATCTGATGCTTTAGATAAAGTGTGTTATGaaaTTACAACCAATGATGATGGTGTGTACCGTGATGACCATGCAGTTTCCTTGCAAGTGGCAGGCTTGGAGAGGCCTAAGAGGAAGCGTGGGCGGCCACCGAAGAAGGCAAAGTCCCCCGAGGAGCTCGCCCGAGAGGCCGTAGCCAAGATACAACAAACCACAGTAACTAAACCTGCCCACGACAAGAGGGACGAGGATGACCTGTCTGGGAAGAGACGGAGGAAAACCCCCACTAGGTTCAAAGAAGCTGTTCAGGGCAAAGAGCTGGAGCGCATATTCCTGGAGGTGGGGGTGATCGACGGGTCGGAGAGCGAGCACGAGGTGAAGGCGGAGCCGGAGCCCGCGCCACCCGCCAAGGAGCCCGAGGTGATCGGCCACATCGACCAGTCCGGCGAGCTGGTGCTGCGCGTCAAGAACAAGGGCCGCGGCAGGCCCAAGGGGCGGTCGAACCAGACCCGCGAAGAATGCGCCATATGCGGCATGGAGTTCGTGTCGCGCGGCCGCTACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACAAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGGTGAGTGGTGACAATGACATGTCGCACGTGGCGGCGCACGGGCCCGTGCTGTACCGCTGCGGCTGCGGCGAGCCCTTCCCCACGCGCCTCGCCTTCACCGCGCACCAGGCCGCCACGCAGCACAGCGGCCGCAGCGTCGAGCCCGTGCCCGACGAGACGCCGCAGGACCCGCCAAAAGAAACCGAAGTAATTCCCAAAGTAGAGAAACAAGAAGAGTCGCCATCAGTATCGACAGCGCTGAGCTCCACCCAGACGAACGTCACCATTGTGCCGCCAGCGAAGCCCGAGCAAAGCGATGAGATGGCGACCCCCGTAGACCCCTTGGAGTTCGGCGACGGGGATGTTACCAATGCCACAATAACTGAAGTTCCTATACAAGGCGTAGTGGAAGTGAGTCCAGGGAAGAAGAAAATCAAGTGCAATAATTGTGACAAATTGTTTAGCAACAGACAGAGCAAGTCGCTACATAATAAGGCGGTGCACCTCGGCGAGCGGAACTACGCGTGCACGGAGTGCGACGCGCGCTTCGCGTACCCGCGCTCGCTGGCCGTGCACCGCGTGTCGCACCGCCGCGCGCGCCCCAGCCGCGGCTTCGCGTGCGATCTCTGCGGAAAGGTGTTAAACCACCCTTCGTCAGTGGTGTACCACAAGCAAGCGGAGCACGCGGAACAGCGCTACGTGTGCGGAAAGTGCGGAAAACATTTCCGCCACAAACAGTTGCTGCAGAGACATCAGCTCGTTCATTCGCAGCTACGACCGTTCCACTGCAAGATGTGTAACGCGTCGTTCAAAACGAAGGCGAACCTCGTGAACCACCAGCTGCTGCACTCCGGCGTGAAGAAGTTCACGTGCGAGATCTGCAAGCAGAAGTTCGCGCACAAGACCAGCCTCACGCTGCACATGCGCCTGCACACGGGCTTGAAGCCGTTCACGTGCAGCACGTGCGGCAAGAGCTTCAGCCAGAAGGGCAACCTGTCGGAGCACGAGCGCATCCACACGGGCGAGAAGCCCTACCAGTGCAGCGTGTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACGCGCGCCGCCACTACGCCGACAAGGCGCTGGCGTGCCCCAAGTGCGCCAAGCGCGTGTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACGCGCGCCGCCACTACGCCGACAAGGCGCTGGCGTGCCCCAAGTGCGCCAAGCGCGTGTGTCCGCGCCGCTTCACCACCTCCTCGCAGCACCGCCTGCACGCGCGCCGCCACTACGCCGACAAGGCGCTGGCGTGCCCCAAGTGCGCCAAGCGGTTCGGGTCGCGCAACTCGTGGGCGCTGCACGTGCGGCGCTGCGACTGCAGCACCGCCAAGCTCAAGCAGCCGATTGAAAAGAACAAGCAATCCAACAAGCAAGTGAGCCTGCTAGTGAACGACAAGAACGTGGCACAACAGACGCAGACGAGCGTACAGCCGCAGGTGCAGTTCGAGCCCTTGCAGCAGAGACTGGACGCTGACGACGACAGCGACGAGCGCGTCATATACGTGGCGTACGACGCGGACGACTCGCAGACCGGCGCCTTCCACATACTGGACCCCGAGCAGGCGGTGAACATAGAGGAGAGCCGCGTGCTGTCCAGCTGCCAGCTGTACGGCGGCGCGGGCTCGTCGCTGCTGGTGCCGCAGCCGCTGCAGCAGGtgcagcagctgcagcagctgcaGCGGCTGGACGCCGTGAAGCTGGAGACGGAGGAGCTGCAGCTGCACATCGAGGAGGACGACGAGGAGGAGGAGGCCGTGCTGAACGACGGAGAGAGCATACCCGTGACAGACGAGCAGGGCAACCCGCTGCACTTCACCATGCAGGACGGCACCAAGCTGGCCATCACCTCAGTGGATGGCAAGACGCTGCAGGTCATCACACAAGACGGTCAGACCATACCCGTGGAAATTAACGGCTACAATGAAGAAGAAGTGCACATAACGCCCGCGGAGCCGGTGCTGCAGCAGATCGAAGTGCAGAAGGCGCTGGACGCGGCCGCCATGCCCGTCACGCACTACTTCACTATCGTGTAG
- Protein Sequence
- MEVFLYNSTVCRLCGEENDNGNLLYSCEENNQNLSEIINSYLPIKVEDDGELPRTICPGCTIQLEATVEFLNLIINGQKVIRELYKREREYKQSILNSPGADASDALDKVCYEITTNDDGVYRDDHAVSLQVAGLERPKRKRGRPPKKAKSPEELAREAVAKIQQTTVTKPAHDKRDEDDLSGKRRRKTPTRFKEAVQGKELERIFLEVGVIDGSESEHEVKAEPEPAPPAKEPEVIGHIDQSGELVLRVKNKGRGRPKGRSNQTREECAICGMEFVSRGRYMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDKTPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPVSGDNDMSHVAAHGPVLYRCGCGEPFPTRLAFTAHQAATQHSGRSVEPVPDETPQDPPKETEVIPKVEKQEESPSVSTALSSTQTNVTIVPPAKPEQSDEMATPVDPLEFGDGDVTNATITEVPIQGVVEVSPGKKKIKCNNCDKLFSNRQSKSLHNKAVHLGERNYACTECDARFAYPRSLAVHRVSHRRARPSRGFACDLCGKVLNHPSSVVYHKQAEHAEQRYVCGKCGKHFRHKQLLQRHQLVHSQLRPFHCKMCNASFKTKANLVNHQLLHSGVKKFTCEICKQKFAHKTSLTLHMRLHTGLKPFTCSTCGKSFSQKGNLSEHERIHTGEKPYQCSVCPRRFTTSSQHRLHARRHYADKALACPKCAKRVCPRRFTTSSQHRLHARRHYADKALACPKCAKRVCPRRFTTSSQHRLHARRHYADKALACPKCAKRFGSRNSWALHVRRCDCSTAKLKQPIEKNKQSNKQVSLLVNDKNVAQQTQTSVQPQVQFEPLQQRLDADDDSDERVIYVAYDADDSQTGAFHILDPEQAVNIEESRVLSSCQLYGGAGSSLLVPQPLQQVQQLQQLQRLDAVKLETEELQLHIEEDDEEEEAVLNDGESIPVTDEQGNPLHFTMQDGTKLAITSVDGKTLQVITQDGQTIPVEINGYNEEEVHITPAEPVLQQIEVQKALDAAAMPVTHYFTIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -