Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000177.1:2541845-2551828[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 3.4e-05 0.0018 19.0 6.7 1 23 191 213 191 213 0.98

2 29 0.0047 0.25 12.2 0.3 2 20 269 287 268 289 0.93

3 29 0.00016 0.0085 16.8 0.1 3 23 323 344 321 344 0.96

4 29 0.0084 0.45 11.4 0.5 1 23 395 417 395 417 0.98

5 29 0.022 1.2 10.1 0.4 1 23 444 466 444 466 0.95

6 29 0.0056 0.3 12.0 3.7 2 23 515 536 514 536 0.94

7 29 0.00015 0.0079 16.9 2.3 2 23 580 602 580 602 0.97

8 29 2.2e-05 0.0012 19.5 1.0 1 23 652 675 652 675 0.97

9 29 0.0003 0.016 16.0 0.2 1 23 725 747 725 747 0.97

10 29 0.028 1.5 9.8 5.4 2 23 759 780 758 780 0.96

11 29 0.022 1.1 10.1 1.0 2 23 792 813 791 813 0.96

12 29 0.017 0.88 10.5 0.4 1 23 823 845 823 845 0.98

13 29 2.7 1.4e+02 3.5 6.8 1 23 874 896 874 896 0.91

14 29 0.00076 0.04 14.7 2.5 1 23 907 929 907 929 0.98

15 29 3e-05 0.0016 19.1 1.4 1 23 937 959 937 959 0.98

16 29 0.00038 0.02 15.6 0.5 2 23 979 1001 978 1001 0.97

17 29 1.2 66 4.6 0.9 1 23 1019 1041 1019 1041 0.91

18 29 0.13 7.1 7.6 3.7 1 23 1048 1070 1048 1070 0.97

19 29 0.011 0.61 11.0 0.3 2 23 1081 1105 1080 1105 0.94

20 29 0.0044 0.23 12.3 0.2 2 23 1128 1149 1127 1149 0.94

21 29 1.7 92 4.1 0.9 2 20 1153 1171 1152 1172 0.91

22 29 0.0031 0.17 12.8 0.2 2 23 1230 1251 1229 1251 0.95

23 29 1.5 80 4.3 3.7 5 23 1261 1279 1258 1279 0.94

24 29 0.02 1.1 10.2 0.9 2 23 1290 1312 1289 1312 0.95

25 29 3.6 1.9e+02 3.2 6.5 2 23 1329 1347 1329 1347 0.89

26 29 0.47 25 5.9 1.4 2 21 1351 1370 1351 1371 0.93

27 29 0.29 15 6.6 0.4 2 23 1420 1441 1419 1441 0.93

28 29 0.023 1.2 10.0 1.1 2 23 1452 1474 1451 1474 0.95

29 29 6.6 3.5e+02 2.3 3.1 2 19 1512 1529 1511 1532 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	3.4e-05	0.0018	19.0	6.7	1	23	191	213	191	213	0.98
2	29	0.0047	0.25	12.2	0.3	2	20	269	287	268	289	0.93
3	29	0.00016	0.0085	16.8	0.1	3	23	323	344	321	344	0.96
4	29	0.0084	0.45	11.4	0.5	1	23	395	417	395	417	0.98
5	29	0.022	1.2	10.1	0.4	1	23	444	466	444	466	0.95
6	29	0.0056	0.3	12.0	3.7	2	23	515	536	514	536	0.94
7	29	0.00015	0.0079	16.9	2.3	2	23	580	602	580	602	0.97
8	29	2.2e-05	0.0012	19.5	1.0	1	23	652	675	652	675	0.97
9	29	0.0003	0.016	16.0	0.2	1	23	725	747	725	747	0.97
10	29	0.028	1.5	9.8	5.4	2	23	759	780	758	780	0.96
11	29	0.022	1.1	10.1	1.0	2	23	792	813	791	813	0.96
12	29	0.017	0.88	10.5	0.4	1	23	823	845	823	845	0.98
13	29	2.7	1.4e+02	3.5	6.8	1	23	874	896	874	896	0.91
14	29	0.00076	0.04	14.7	2.5	1	23	907	929	907	929	0.98
15	29	3e-05	0.0016	19.1	1.4	1	23	937	959	937	959	0.98
16	29	0.00038	0.02	15.6	0.5	2	23	979	1001	978	1001	0.97
17	29	1.2	66	4.6	0.9	1	23	1019	1041	1019	1041	0.91
18	29	0.13	7.1	7.6	3.7	1	23	1048	1070	1048	1070	0.97
19	29	0.011	0.61	11.0	0.3	2	23	1081	1105	1080	1105	0.94
20	29	0.0044	0.23	12.3	0.2	2	23	1128	1149	1127	1149	0.94
21	29	1.7	92	4.1	0.9	2	20	1153	1171	1152	1172	0.91
22	29	0.0031	0.17	12.8	0.2	2	23	1230	1251	1229	1251	0.95
23	29	1.5	80	4.3	3.7	5	23	1261	1279	1258	1279	0.94
24	29	0.02	1.1	10.2	0.9	2	23	1290	1312	1289	1312	0.95
25	29	3.6	1.9e+02	3.2	6.5	2	23	1329	1347	1329	1347	0.89
26	29	0.47	25	5.9	1.4	2	21	1351	1370	1351	1371	0.93
27	29	0.29	15	6.6	0.4	2	23	1420	1441	1419	1441	0.93
28	29	0.023	1.2	10.0	1.1	2	23	1452	1474	1451	1474	0.95
29	29	6.6	3.5e+02	2.3	3.1	2	19	1512	1529	1511	1532	0.91

Sequence Information

Coding Sequence: ATGGCTCTCAAGCTTGGGAAATGCAGGCTCTGCCTCAAACTGGGCGACTTTTACTCCATCTTCACGGTGGACAACAACATGCAGCTGGCCGAAATGGTCATGGAATGTGCCCGGGTGAaaATATACGACGGCGACGGACTGCCGGACAAGATTTGCAGCGAATGTATTCAGAAGCTGAGTAGTGCGCATATTTTCAAACAACAGTGCGAGCGCTCCGATCAGGAGCTGAGACGGAACTATGTTCCTCCTCCAGGTTTTAGTCCAACTCCGCCGCCAAACAGACAGAGCAGTGATTCGGCGTTCTCGTCTCACACTGAAGTTTCCAAGCCATCATCTTCCACCGAGAGCCAAGTCACTCCCGTCAGTCGGACGAGAAAGCGCAGTAGAGACAGTATCGACGAAGCTTCCACAAGCAGTCGCTCGAACTACAAGCCGGGAAGCTCAAAGAGAGTCGATGAATTGCGCATGTCCCAAAAGAAACCGAGAATTTCACAGAATTCGGATTCAGACTATGAGGACAACAGCGCGTCGTTGTACTCCGCAGAAACTGACTCTGACGAACCCTTGCAGCACAAGTGTAACCAGTGCTCCAAATCATTCAGGACTGCCAAAAGTTTGTGTGCACATATGAAAtcacataaaagaaaatttaacttaCAAAACGCTCAAAATGCTACTCCCACTAATGAATCGCCTGCTAAAAAACAAGCACCCAAAGAAACCCCTACCAAGGAAGCCAAGGAAACCCTCACCAAGGAAGGTTACAAAGAAATGCGAGACGCCAAGGACGACGACGATAAATTAAACTGCGATAAATGCGGAAAACAgttcaaattaaatataatgCTGAAAAGGCATTACGATCTCTGCGGGAAATCTCCTCAAAAAGAACTCTTAGTCTCATTAGAGCCTATAGATATGGTACAAGCTATTACTACTAGTAGTACTCAATCCGGCAAGATCGATTGCGAAATATGCACCGCTAAGTTTAAAACTATAGACTATCTAGAGAAACACATGAGAATTGTACATGCGGCTGTGCCAAAAAAAGAAAGACTCTCAATTACAAACGAGAACGGTATTTCATGCGTACCGTGCGTCTTTTGCAACCAACCATTTGAGGATTACTACGTGCATAGTGCTCACCTTTCTGCGTGTCCTAAAAAGACGGATACAATAAACTTCGAATGTACAGTTTGCAAGAaggttataattaaaaaatcttcaTACATCCTCCATGCTAAGATGCATTTTTTTCAATTAGCCGCAATAAAAGAGCCACCTGAGAAGGCTTCTAATACCAGTAATAACGAAGGTTGTAATAACAGTCATCAATGTCGGATGTGCACTAAGAAGCTACCTTCGCAGGAAGCGTTGATCAGTCATCTCGCTGCTCATATGAACAAAGCAGAAGAGGAAGACTATGAAGATAATGGCGATACAATGGCCGCTGACGATGATAACGATTCGAGAACTAGTACAGTCGAAGAATCGGCGTCCGTGCATTCGGACTACAACTCTTATATCACCAGCGGACCCCTCCAGTGTAGGTACTGCGACAAAAACTTCAAATACAAGAAGGCTCTGCATTCACACGAAGTTAAACACACGACTGGTGATATAAAAATCGAGAAGTCAGACAAGAAATCCAAAAATTTCTTGAACCAGACCAATAATTCGTATTTATCCGACGAGTCCGATATGGAGTCTAGTCAAGACGAAGGCGAAGAAGACAACACCTGTGATATTTGCGAGAAGCAGTTTTCCTACAAGCGGTTGCTTATAAAGCACAAGCGAACCAAACATTGTATGACTTCTGGCACGAAGCGAGCGAAAATTAACCTAAAGGACTGCTCGGTGCGCTGCCTGATCTGCGACCTGGAGATGAAGGTGAGCGCGATCAACGAGCACAACCAGACGCACATCACGGCCAACATGAAGCCGCGCAACCTGTACACGTGCAAGGAGTGCGGCGAGCAGTTTAAGAGTTGCAGTGGGCTCGCGAACCACATCAAGCTGGTGCACCGGCTGCACCAGCCGCCCGCCAAGAAGATCGTCGTGCCCAACGCCGATCTGGCGGATTTTTGTGAAGTCGTTGTGACGAAGGCGGAACCCCTGGACGAGCTCCAGAGTCACAACGGCTTTGGTGAGGTTTCCGTCGACGCAAGCGGCTTTACGTGCCCCGTGTGCAGCAAGACGCTGCCTACCCTCGTCTCGCTCAAGCGCCACGTCAATTGGCACAAGAATGTCGGGAATAACATCGAGAAGAAGTTGGAGTGCTTTGTTTGCAAAGAGatcTTCCGTTTCCAATGTCACTACAAGATCCACATGCGGCAGCATTACCAGGATCCCAACCTGGACCCCAAGCTGCTCACGTGCGACATCTGCGGCCGCAAGAGCAAGCACCTGCGCGCCGCTCAGGCGCACATGAACTTCCACAAGCAGACGCGCTTCAAGAACAAGGACTACGAGTGCGCCATCTGCAAGCGAGTGTTCCAGTACAGGAAGGTGTATCTGTCGCACATGGCCATCCACTTCAAGCGCGGCGAGAGCGCCGCCACCGCCGTCGTGGGCGACGTGGTACCGCTCACGCAGGACAACAAGCGGTTCGACGGCACGCACACCTGCCACCTGTGCGGCAAGGTGTGCGACTCCGAGAACTCGCTCAAGTGCCACGTCAGCTGGCACAACTCCAAGACGCTGCTGTACGGCGCGCGCCACGAGTGCGAGATCTGCAACGTGCAGTTCACCAACAAGCGGCGGCTCGAGCTGCACACCCGCACGCACTTCGAGGACGAGAACGGGCCCTACAAGTGCCACATATGCGGGAAAGGATTCATCGTAGAGGACTATTTTAAACGACACGTTAAAGGCCACAACTTCGATCACCAATCCCACAAAAAGCGTATCGAAAAATTGCGGAAGGACAAAGTAAAATGTCCCATCTGCGAGCGATACTACCCCGATCTGATCCATCTCATCCGACATCTTCGACGAACTCACCCCGAAAGCAAAATGATCAAGGAAGACCCCGACGCCCCGCCTCCCATCTACTACTCGTGTAAACTGTGCGCCAAGGTTTTCTTAGACGAGAGAAGATTGCAGCATCACGAGGAGGCTCATCTGAGAAAACCAGAATTCTTCAAATGCAAGTTCTGCGGCAAGAAAACTATCTCGCTCAAGAATCACAGGGTTCACATCAAGGGCCACCTGACTCAGAAGTATATTGACGAGCCTCTGAAGTGTCCGAGGGAGGACTGCGACGAGACGTTCGGGCGCGGCTACGATTTACACTACCACTTGCGCGACGCGCACGGCATCACGGAAACGTGGATCGCCGAGCGCGGCCCGAGAACGCTGGACGGCCCGCTCAAGGAGCTGCAGTGCTCGATATGCTACAAAGTACTAGCTAGCAAGGGCAACTACGAGAGGCATGTAGACTACCACAACTCTCTGCGATGTAACTACTGCTTCGAATTCTTCAACAGTTTCCGCTTCCTCGAGGGCCACTTGACGTTCAGCTGCGAGAAGAAGAAACTAATCGGTGACTCTGAGGTCTACCTTAAGAGAGTGAAATGCCATATCTGCTACAAGGCCTTCCACTTGCAGGTGAAGCTAGATTGCCACCTGCGCACGCAGCACGATATCAAGACATTCAAGGAGGCCTCGGAGGGCAAGAAGGAGATCGTGTGCGACTACTGCTTCAAGGTGTTCGAGAACGAGTACGCGCTCAGCACGCACAAGATCTACCACCGCACCATCGGCTACTACGGTTGTATCTACTGCAACAGGAAGTTCAACACTATGACAGCGTACCGCAAGCACAAGAACCACCACTTCTCTCAACTAAACGTCGACAACCCCACCAAGTGCGAACACTGTGACGAGACGTTTGTCGCGTTCCGAGAGATGATATACCACATGCGGGACGAGCACGGTGACGACAAGGAGTGGATCGTGCTGCCCAAGGAGTCAATCGAAGAGAAGTGCAACATATGCCATAAAACTTTCTTCAATCTTCACAGACATTTGGATTACCATGAAGAGAACCGATGTAAAAAGTGCGGGGAGTACTTCTTCTCGCAAATGGACTACGACAATCATTTGTGCGCAGTCGACAGCGACGAGGAAGTCACCGAAGTCAACACCAACGGCGTTCGGGCAGTTTACGAAGAGTGCACCTTCTGCTTTAAACCCATTACCAAGAAGAACTCGAAAAAGAAACACGACATAATCCACAAGGGATCCGGAACTATATCGTGTCGGTTCTGCCCTCTTAAGTTTAAAACTATAGACGCGTTCAACATCCACGCATTCTCCCATCGAAGCAGAAAGTATAAGAAGAAGCCAATCAAGTGTCGTAAATGTAAGGAGAAGTTTGTGAAATACGGTCCATTCATGAGGCACATGAAGGAAGTCCACAAGTCTTCTAAGAAGCTTCACTATAGAACAACAGTCATGGCGGAGGAATGCGTCGTGTGTCACGACAACTTTCCCAATTTGCATAATCATTACCGCGCACATTTACAGAACCAGTGTCAGCAGTGCTTCAAGTATTTCACTTCGTTCAAACTATTTTCTATTCACGAATGCGATAAGGAAGACTCGAATCCATCTAAAGTGTTTACGTGTGACCAAAACTTGATTGAACTTATTAACAACTACGTTCCTAAAGATGAGAAGGATGATGAAAAATACTATGGTTATGAGGAAGGAGACGAAGTtgaagaagatgaagatgaagTTGATATTGAGACGATAGAGGCTCCCGTCACTTCAAAACCCATAAATCAAACTTACGTCCCTGATATAACATCACAGGATGAGGACAGCCAAAACTCTATAGACATAGACGAACAAAATGTCCATGAGATGGCGCATGCACCGATTATATCAGACGTTCTGTCCCtctttaaaaagaaagaagaaaaaattaaattagatgATGACAAAGGTAATGATAGTGATGTTGTAGTTTTGACAGATGAAGACTCTGTAGGTTTTGAGAACAACATTATGACTGTCATAACTATAGAAGATTAA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNNMQLAEMVMECARVKIYDGDGLPDKICSECIQKLSSAHIFKQQCERSDQELRRNYVPPPGFSPTPPPNRQSSDSAFSSHTEVSKPSSSTESQVTPVSRTRKRSRDSIDEASTSSRSNYKPGSSKRVDELRMSQKKPRISQNSDSDYEDNSASLYSAETDSDEPLQHKCNQCSKSFRTAKSLCAHMKSHKRKFNLQNAQNATPTNESPAKKQAPKETPTKEAKETLTKEGYKEMRDAKDDDDKLNCDKCGKQFKLNIMLKRHYDLCGKSPQKELLVSLEPIDMVQAITTSSTQSGKIDCEICTAKFKTIDYLEKHMRIVHAAVPKKERLSITNENGISCVPCVFCNQPFEDYYVHSAHLSACPKKTDTINFECTVCKKVIIKKSSYILHAKMHFFQLAAIKEPPEKASNTSNNEGCNNSHQCRMCTKKLPSQEALISHLAAHMNKAEEEDYEDNGDTMAADDDNDSRTSTVEESASVHSDYNSYITSGPLQCRYCDKNFKYKKALHSHEVKHTTGDIKIEKSDKKSKNFLNQTNNSYLSDESDMESSQDEGEEDNTCDICEKQFSYKRLLIKHKRTKHCMTSGTKRAKINLKDCSVRCLICDLEMKVSAINEHNQTHITANMKPRNLYTCKECGEQFKSCSGLANHIKLVHRLHQPPAKKIVVPNADLADFCEVVVTKAEPLDELQSHNGFGEVSVDASGFTCPVCSKTLPTLVSLKRHVNWHKNVGNNIEKKLECFVCKEIFRFQCHYKIHMRQHYQDPNLDPKLLTCDICGRKSKHLRAAQAHMNFHKQTRFKNKDYECAICKRVFQYRKVYLSHMAIHFKRGESAATAVVGDVVPLTQDNKRFDGTHTCHLCGKVCDSENSLKCHVSWHNSKTLLYGARHECEICNVQFTNKRRLELHTRTHFEDENGPYKCHICGKGFIVEDYFKRHVKGHNFDHQSHKKRIEKLRKDKVKCPICERYYPDLIHLIRHLRRTHPESKMIKEDPDAPPPIYYSCKLCAKVFLDERRLQHHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKYIDEPLKCPREDCDETFGRGYDLHYHLRDAHGITETWIAERGPRTLDGPLKELQCSICYKVLASKGNYERHVDYHNSLRCNYCFEFFNSFRFLEGHLTFSCEKKKLIGDSEVYLKRVKCHICYKAFHLQVKLDCHLRTQHDIKTFKEASEGKKEIVCDYCFKVFENEYALSTHKIYHRTIGYYGCIYCNRKFNTMTAYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDEHGDDKEWIVLPKESIEEKCNICHKTFFNLHRHLDYHEENRCKKCGEYFFSQMDYDNHLCAVDSDEEVTEVNTNGVRAVYEECTFCFKPITKKNSKKKHDIIHKGSGTISCRFCPLKFKTIDAFNIHAFSHRSRKYKKKPIKCRKCKEKFVKYGPFMRHMKEVHKSSKKLHYRTTVMAEECVVCHDNFPNLHNHYRAHLQNQCQQCFKYFTSFKLFSIHECDKEDSNPSKVFTCDQNLIELINNYVPKDEKDDEKYYGYEEGDEVEEDEDEVDIETIEAPVTSKPINQTYVPDITSQDEDSQNSIDIDEQNVHEMAHAPIISDVLSLFKKKEEKIKLDDDKGNDSDVVVLTDEDSVGFENNIMTVITIED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01092303;
90% Identity: iTF_01092303;
80% Identity: -