Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000170.1:9891935-9917939[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00014 0.0074 17.0 1.5 1 23 413 435 413 435 0.96

2 25 0.011 0.58 11.1 0.6 1 20 441 460 441 463 0.94

3 25 3.6e-05 0.0019 18.9 5.4 1 23 482 504 482 504 0.98

4 25 2.6e-05 0.0014 19.3 5.6 1 23 510 532 510 532 0.99

5 25 5.7e-05 0.003 18.2 5.3 1 23 538 560 538 560 0.97

6 25 5.7e-05 0.003 18.2 5.3 1 23 572 594 572 594 0.97

7 25 0.00027 0.014 16.1 6.2 1 23 610 632 610 632 0.97

8 25 1.8e-05 0.00097 19.8 7.3 1 23 638 660 638 660 0.97

9 25 1.2e-06 6.1e-05 23.6 2.9 1 23 666 688 666 688 0.97

10 25 0.00016 0.0087 16.8 6.7 1 23 694 716 694 716 0.97

11 25 0.00016 0.0086 16.8 6.5 1 23 722 744 722 744 0.97

12 25 7.9e-07 4.2e-05 24.1 1.9 1 23 750 772 750 772 0.98

13 25 1.6e-05 0.00082 20.0 7.7 1 23 778 800 778 800 0.98

14 25 5.6e-06 0.0003 21.4 7.6 1 23 806 828 806 828 0.98

15 25 2.7e-06 0.00014 22.4 5.3 1 23 834 856 834 856 0.98

16 25 1.8e-05 0.00097 19.8 3.6 1 21 862 882 862 883 0.95

17 25 6.3e-06 0.00033 21.3 3.7 1 21 946 966 946 967 0.96

18 25 2.7e-06 0.00014 22.4 5.3 1 23 1030 1052 1030 1052 0.98

19 25 3.2e-05 0.0017 19.0 7.0 1 23 1058 1080 1058 1080 0.97

20 25 0.00018 0.0096 16.7 7.3 1 23 1086 1108 1086 1108 0.97

21 25 7.5e-06 0.00039 21.0 5.9 1 23 1114 1136 1114 1136 0.98

22 25 9.1e-05 0.0048 17.6 7.8 1 23 1142 1164 1142 1164 0.97

23 25 6e-06 0.00032 21.3 4.0 1 23 1170 1192 1170 1192 0.96

24 25 0.0012 0.062 14.1 0.3 1 23 1199 1221 1199 1221 0.96

25 25 0.024 1.2 10.0 5.3 1 23 1229 1251 1229 1251 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00014	0.0074	17.0	1.5	1	23	413	435	413	435	0.96
2	25	0.011	0.58	11.1	0.6	1	20	441	460	441	463	0.94
3	25	3.6e-05	0.0019	18.9	5.4	1	23	482	504	482	504	0.98
4	25	2.6e-05	0.0014	19.3	5.6	1	23	510	532	510	532	0.99
5	25	5.7e-05	0.003	18.2	5.3	1	23	538	560	538	560	0.97
6	25	5.7e-05	0.003	18.2	5.3	1	23	572	594	572	594	0.97
7	25	0.00027	0.014	16.1	6.2	1	23	610	632	610	632	0.97
8	25	1.8e-05	0.00097	19.8	7.3	1	23	638	660	638	660	0.97
9	25	1.2e-06	6.1e-05	23.6	2.9	1	23	666	688	666	688	0.97
10	25	0.00016	0.0087	16.8	6.7	1	23	694	716	694	716	0.97
11	25	0.00016	0.0086	16.8	6.5	1	23	722	744	722	744	0.97
12	25	7.9e-07	4.2e-05	24.1	1.9	1	23	750	772	750	772	0.98
13	25	1.6e-05	0.00082	20.0	7.7	1	23	778	800	778	800	0.98
14	25	5.6e-06	0.0003	21.4	7.6	1	23	806	828	806	828	0.98
15	25	2.7e-06	0.00014	22.4	5.3	1	23	834	856	834	856	0.98
16	25	1.8e-05	0.00097	19.8	3.6	1	21	862	882	862	883	0.95
17	25	6.3e-06	0.00033	21.3	3.7	1	21	946	966	946	967	0.96
18	25	2.7e-06	0.00014	22.4	5.3	1	23	1030	1052	1030	1052	0.98
19	25	3.2e-05	0.0017	19.0	7.0	1	23	1058	1080	1058	1080	0.97
20	25	0.00018	0.0096	16.7	7.3	1	23	1086	1108	1086	1108	0.97
21	25	7.5e-06	0.00039	21.0	5.9	1	23	1114	1136	1114	1136	0.98
22	25	9.1e-05	0.0048	17.6	7.8	1	23	1142	1164	1142	1164	0.97
23	25	6e-06	0.00032	21.3	4.0	1	23	1170	1192	1170	1192	0.96
24	25	0.0012	0.062	14.1	0.3	1	23	1199	1221	1199	1221	0.96
25	25	0.024	1.2	10.0	5.3	1	23	1229	1251	1229	1251	0.99

Sequence Information

Coding Sequence: ATGAATTCGGATCACCACAGTATTAATACGGGTGGTGGCCAACCTCCAAGCAATTCGGAGTCTCAGAATGCGAGGGTGCAGTCAGCgcagcaacagcaacagcaagcTAACTTGACGCCTACAACGTCTGCTACTGACTTGAGAGTGAACTCTGCAGCTGTGAACGTTGCTTTGTCGAGCGTGGCCAAGTACTGGGTGTTTACTAACCTTTTCCCCGGCCCATTGCCGCAGGTTTCTGTCTACGGTTTACCCAGTACGAGAATTGAAAATGGGAAACCAGTTCAGGACCTTGGTCAGGCACATGGCGGTATATTGAACGGGGATCCCAACATCATACTGGGGCATGCTGGGCAGCCTCAGGTCACAGTGTCTGCAGCGGGACAGCAGATTCCTGTGTCACAGATCATTGCAACACAGGCTACACAAGGAcatgATGGTCTGGTGGGCCACAATCAGCAACAGGAGGCGTCGGCCAGTGCCGCCCAGCTGTCAGTGGCGGGCCAGGCTTCCCAGCAGGTACCCAATAATCGGGTCGACTTTGTACAACACCATAACATTGATATGGGACATCATTCCCAGCAACACATAATGCAGCAACAGTTAATGGCTGCCGCTCGGCCGGAACATGCCAACCAACAGATCCAACTGACCGTGAGCGAGGATGGCATAGTAACAGTGGTGGAGCCGGGTGGCGGGAAATTGGTGGACAAGGAAGAACTCCACGAGGCGATCAAGATGCCCTCAGACCACACGCTCACTGTGCATCAGTTGCAGCAGATTGTTGGACATCATCAGGTAATAGACAGTGTAGTGCGCATAGAGCAAGCCACAGGCGAGCCGGCGAACATCCTGGTAACACAGAACCCGGACGGCACCACGTCCATAGAGACCAGCGCTGTCGACCCGCTGCTTGTCAAAGACGAGAAGAGCGTGGCCAAGATAGAGTCCACTCAGTTCGCGATACCCGCCGAAATTAAGGACATCAAGGGAATAGACTTAAAGAGTGCAATGGGTATGGAAGGGGCAGTGGTCAAGATATCAACTGGCAGTGAGCACGACCTTCACACCATGTACAAAGTGAATGTGGAGGACCTGTCGCAATTGCTGGCATATCATGAAGTGTTCGGAAAACTAAGCACTGAAGGACAGCAGCAAGCTAAGgTGATAAACGACGTGGACGTCGAAGTGGCGGGCACAAGCGCAGCGATGTCGGAAGCTGAGTCCTCCCCTGGACACCACGCCTGCGATATTTGTGGGAAGATATTCCAGTTTCGCTACCAGCTTATTGTTCACAGacgGTATCACGGCGAGAGTAAGCCGTACACTTGTCAAGTGTGTGGATCTGCTTTTGCCAATGCAGTCGAATTGTCGAAACATGGAAAATGTCACCTTGCGGGCGACCCGGCCGAGCGTCAAGCAAAGAGATTAGCTCAAGACAAACCGTACGCGTGCTCCACGTGCCACAAGACGTTCTCGCGCAAGGAGCATCTCGACAACCACGTGCGCAGTCACACTGGGGAGACGCCTTATAGGTGTCAGTACTGCTCGAAGACGTTCACTCGCAAGGAGCACATGGTGAACCACGTGCGCAAACACACGGGCGAGACGCCACACCGCTGCGAGATCTGCAAGAAGAGTTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACGGAGTGTAACAAACACACGGGCGAGACGCCGCACCGCTGCGAGATCTGCAAGAAGAGTTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACGGTGCACCACACTGAGAGTGTAACAAACACGGACGAGACGCCACATCGCTGCGAGACCTGCAAGAAGAGTTTCACGCGCAAGGAACACTTCATGAACCACGTCATGTGGCACACGGGTGAAACGCCGCACCATTGTCAAATATGCGGGAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCCCATACAAACGATACGCCGTTTCGATGCGAACTGTGCGGCAAGTCCTTTACGAGGAAGGAACACTTCACCAATCACATATTGTGGCATACGGGTGAGACCCCCCACCGCTGCGACTTCTGTTCAAAGACGTTCACTCGCAAGGAACATTTACTCAACCATGTGCGTCAACACACCGGCGAATCGCCGCATAGGTGCAACTTCTGCTCAAAGTCCTTCACGCGACGCGAGCACCTCGTGAACCATGTACGACAGCACACCGGGGAAACTCCTTTCCAGTGTGGATACTGCCCTAAAGCGTTCACCAGAAAGGACCATCTTGTAAATCACGTCCGCCAACACACCGGGGAATCCCCACATAAGTGTTCATATTGTACGAAGTCTTTCACACGCAAGGAGCATCTGACCAATCACGTGCGCCAACACACCGGGGAATCCCCGCATCGGTGTACCTACTGCTCCAAATCGTTCACAAGAAAGGAACATCTTACTAATCATATAAGACAGCATACGGGGGAGACTCCCCACAAGTGCACGTATTGCCCGCGAGCCTTCTCCCGCAAGGAGCATCTGAACCAACACATAAGGCAGCACACCGGGGACACGCCGCACACCTGCACGTACTGCAACAAGAGCTTCACCAGGAAGGAGCACCTTGTGACCCACGTTCGGTATGTAGCAATGTGTATTGACTCCCCACAAGTGCACGTATTGCCCGCGAGCCTTCTCCCGCAAGGAGCATCTGAACCAACACATAAGGCAGCACACCGGGGACACGCCGCACACCTGCACGTACTGCAACAAGAGCTTCACCAGGAAGGAGCACCTTGTGACCCACGTTCGCACACCGGGGACACGCCGCACACCTGCACGTACTGCAACAAGAGCTTCACCAGGAAGGAGCACCTTGTGACCCACATTCGGTATGTAGCAATGTGTATTGACTCCCCACAAGTGCACGTATTGCCCGCGAGCCTTCTCCCGCAAGGAGCATCTGAACCAACACATAAGGCAGCACACCGGGGACACGCCGCACACCTGCACGTACTGCAACAAGAGCTTCACCAGGAAGGAGCACCTTGTGACCCACGTTCGCAATGTGTATTGACTCCCCACAAGTGCACGTATTGCCCGCGAGCCTTCTCCCGCAAGGAGCATCTGAACCAACACATAAGGCAGCACACCGGGGACACGCCGCACACCTGCACGTACTGCAAGAAGAGCTTCACCAGGAAGGAGCACCTTGTGACCCACGTTCGGCAACACACTGGGGAGACGCCATTCAAATGCACGTTCTGTTCAAAGTCCTTCTCAAGAAAGGAACACCTCACAAACCACGTCCACCTCCACACGGGGGAAACTCCACACAAATGCCCCTTCTGCACCAAGACATTCTCCAGAAGAGAACATTTGACCAACCATGTCCGGATACACACGGGCGAGTCGCCGCACCGGTGCGAGTTCTGTCAGAAGACGTTCACCCGCAAAGAGCACCTCACCAACCACTTGAAGCAGCACACGGGCAACACGCAGCACGCCTGCAAAGTGTGCTCCAAGCCTTTCACCAGGAAGGAGCACCTCGTTCAACATATGAGGTCCCACAGTTGCGGCGACCGGCCGTTTAGTTGCGGCGAGTGCGGGAAATCGTTCCCCCTGAAGGGCAACCTGCTGTTCCACGAGCGGTCACACAAAAGTGGCAATCCTAAAACATTCCGCTGCGAAATCTGCTCCAAAGAGTTCATGTGCAAGGGTCACTTGGTATCGCATCGGCGAACGCACACCGAAACGGGCGAAACCGCGACGCCTACTGAGCAGGGGGACGAGAATGAGAATTGCGGCGATTATGCCAAGTGCGAGAAGGACAACACCGAAATACCAGAGAGGAAACACGATATCAGAGCAACATCAGAAAACAGAAATTACAATAGCAATTCAACACAAACTCAACTGAGTACTGTTATGCAAATTACAAGCCAGCAACCAGTGCGAGCAGGCGCGGTGACGAGCGCAGCGAGCGTCTCGACGGGCACGTTCACGCACTCGGCCGGCGCGCAGCACCACGCGGGCGCCGCCATCGCCCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNSDHHSINTGGGQPPSNSESQNARVQSAQQQQQQANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYGLPSTRIENGKPVQDLGQAHGGILNGDPNIILGHAGQPQVTVSAAGQQIPVSQIIATQATQGHDGLVGHNQQQEASASAAQLSVAGQASQQVPNNRVDFVQHHNIDMGHHSQQHIMQQQLMAAARPEHANQQIQLTVSEDGIVTVVEPGGGKLVDKEELHEAIKMPSDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAVDPLLVKDEKSVAKIESTQFAIPAEIKDIKGIDLKSAMGMEGAVVKISTGSEHDLHTMYKVNVEDLSQLLAYHEVFGKLSTEGQQQAKVINDVDVEVAGTSAAMSEAESSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYTCQVCGSAFANAVELSKHGKCHLAGDPAERQAKRLAQDKPYACSTCHKTFSRKEHLDNHVRSHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTECNKHTGETPHRCEICKKSFTRKEHFMNHVMWHTVHHTESVTNTDETPHRCETCKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNQHIRQHTGDTPHTCTYCNKSFTRKEHLVTHVRYVAMCIDSPQVHVLPASLLPQGASEPTHKAAHRGHAAHLHVLQQELHQEGAPCDPRSHTGDTPHTCTYCNKSFTRKEHLVTHIRYVAMCIDSPQVHVLPASLLPQGASEPTHKAAHRGHAAHLHVLQQELHQEGAPCDPRSQCVLTPHKCTYCPRAFSRKEHLNQHIRQHTGDTPHTCTYCKKSFTRKEHLVTHVRQHTGETPFKCTFCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRREHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGNTQHACKVCSKPFTRKEHLVQHMRSHSCGDRPFSCGECGKSFPLKGNLLFHERSHKSGNPKTFRCEICSKEFMCKGHLVSHRRTHTETGETATPTEQGDENENCGDYAKCEKDNTEIPERKHDIRATSENRNYNSNSTQTQLSTVMQITSQQPVRAGAVTSAASVSTGTFTHSAGAQHHAGAAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01092276;
90% Identity: -
80% Identity: -