Basic Information

Insect: Hipparchia semele
Gene Symbol: -
Assembly: GCA_933228835.1
Location: CAKOGE010000178.1:4120093-4130719[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 1.3e-05 0.00067 20.3 3.0 1 23 10 32 10 32 0.98

2 31 1.3e-05 0.00071 20.2 0.3 1 23 38 60 38 60 0.98

3 31 0.006 0.32 11.9 5.7 1 23 125 147 125 147 0.98

4 31 2.7e-05 0.0014 19.3 3.7 1 23 153 175 153 175 0.97

5 31 1.1e-05 0.0006 20.5 0.7 1 23 181 203 181 203 0.98

6 31 2.3e-05 0.0012 19.5 0.2 1 23 210 232 210 232 0.98

7 31 0.0015 0.077 13.8 0.1 5 23 270 288 269 288 0.94

8 31 0.004 0.21 12.5 7.7 1 23 357 379 357 379 0.98

9 31 0.00012 0.0062 17.3 5.2 1 23 384 406 384 406 0.96

10 31 1.3e-05 0.00067 20.3 3.0 1 23 412 434 412 434 0.98

11 31 1.3e-05 0.00071 20.2 0.3 1 23 440 462 440 462 0.98

12 31 0.00023 0.012 16.4 5.4 1 23 468 490 468 490 0.97

13 31 1.2e-05 0.00062 20.4 1.9 1 23 496 518 496 518 0.98

14 31 2.5e-06 0.00013 22.5 5.3 1 23 524 546 524 546 0.99

15 31 2.1e-06 0.00011 22.8 0.4 1 23 552 574 552 574 0.98

16 31 0.00026 0.014 16.2 1.3 1 23 580 602 580 602 0.98

17 31 4.7e-05 0.0025 18.5 1.5 1 23 608 630 608 630 0.98

18 31 0.0037 0.2 12.5 3.8 1 23 636 658 636 658 0.98

19 31 0.65 35 5.5 0.6 1 16 664 679 664 680 0.92

20 31 0.0044 0.23 12.3 7.9 2 23 735 756 734 756 0.97

21 31 2.3e-05 0.0012 19.5 3.5 1 23 762 784 762 784 0.97

22 31 0.00059 0.031 15.1 1.3 1 23 790 812 790 812 0.98

23 31 1.8e-07 9.4e-06 26.1 2.3 1 23 818 840 818 840 0.98

24 31 2.8e-06 0.00015 22.4 2.5 2 23 847 868 846 868 0.97

25 31 1e-06 5.4e-05 23.7 0.9 1 23 874 896 874 896 0.98

26 31 1.5e-06 7.9e-05 23.2 2.6 1 23 902 924 902 924 0.98

27 31 0.014 0.77 10.7 5.0 1 23 930 952 930 952 0.98

28 31 7e-06 0.00037 21.1 0.2 1 23 958 980 958 980 0.98

29 31 0.0043 0.23 12.4 2.4 1 23 986 1008 986 1008 0.98

30 31 8.8e-06 0.00046 20.8 0.6 1 23 1014 1036 1014 1036 0.97

31 31 0.00012 0.0065 17.2 1.3 1 23 1042 1065 1042 1065 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	1.3e-05	0.00067	20.3	3.0	1	23	10	32	10	32	0.98
2	31	1.3e-05	0.00071	20.2	0.3	1	23	38	60	38	60	0.98
3	31	0.006	0.32	11.9	5.7	1	23	125	147	125	147	0.98
4	31	2.7e-05	0.0014	19.3	3.7	1	23	153	175	153	175	0.97
5	31	1.1e-05	0.0006	20.5	0.7	1	23	181	203	181	203	0.98
6	31	2.3e-05	0.0012	19.5	0.2	1	23	210	232	210	232	0.98
7	31	0.0015	0.077	13.8	0.1	5	23	270	288	269	288	0.94
8	31	0.004	0.21	12.5	7.7	1	23	357	379	357	379	0.98
9	31	0.00012	0.0062	17.3	5.2	1	23	384	406	384	406	0.96
10	31	1.3e-05	0.00067	20.3	3.0	1	23	412	434	412	434	0.98
11	31	1.3e-05	0.00071	20.2	0.3	1	23	440	462	440	462	0.98
12	31	0.00023	0.012	16.4	5.4	1	23	468	490	468	490	0.97
13	31	1.2e-05	0.00062	20.4	1.9	1	23	496	518	496	518	0.98
14	31	2.5e-06	0.00013	22.5	5.3	1	23	524	546	524	546	0.99
15	31	2.1e-06	0.00011	22.8	0.4	1	23	552	574	552	574	0.98
16	31	0.00026	0.014	16.2	1.3	1	23	580	602	580	602	0.98
17	31	4.7e-05	0.0025	18.5	1.5	1	23	608	630	608	630	0.98
18	31	0.0037	0.2	12.5	3.8	1	23	636	658	636	658	0.98
19	31	0.65	35	5.5	0.6	1	16	664	679	664	680	0.92
20	31	0.0044	0.23	12.3	7.9	2	23	735	756	734	756	0.97
21	31	2.3e-05	0.0012	19.5	3.5	1	23	762	784	762	784	0.97
22	31	0.00059	0.031	15.1	1.3	1	23	790	812	790	812	0.98
23	31	1.8e-07	9.4e-06	26.1	2.3	1	23	818	840	818	840	0.98
24	31	2.8e-06	0.00015	22.4	2.5	2	23	847	868	846	868	0.97
25	31	1e-06	5.4e-05	23.7	0.9	1	23	874	896	874	896	0.98
26	31	1.5e-06	7.9e-05	23.2	2.6	1	23	902	924	902	924	0.98
27	31	0.014	0.77	10.7	5.0	1	23	930	952	930	952	0.98
28	31	7e-06	0.00037	21.1	0.2	1	23	958	980	958	980	0.98
29	31	0.0043	0.23	12.4	2.4	1	23	986	1008	986	1008	0.98
30	31	8.8e-06	0.00046	20.8	0.6	1	23	1014	1036	1014	1036	0.97
31	31	0.00012	0.0065	17.2	1.3	1	23	1042	1065	1042	1065	0.95

Sequence Information

Coding Sequence: ATGAGAAAGCACACTGACGATAAACCGTTCTCGTGTGACCTGTGCGAGCTGAAATTTGTACACAAATCTGATTTAACGAAGCACATGAAATCTCACACTGGCGACAAACCTTTCTCATGCGAGATATGCGACGAGAAATTTGCACGAAAATCATATTTATTAGGTCACATGACAGTTCATACCGGCGAGAAACCTTTCTGCTGCGGTCTTTTGCCGAAGAAAAGTACGAAGAACCAGCGCGTAGCAGATGGAACACCGTGCTCTGATCCCGGCCATATTTGCGATGGAAAATGTGATAACGAAAACCCACTGCTTGTACCCATGCGATCTATAGCATATAATCTTTTAACTAGTGACATGGACGTTGAACTTTTCTCCTGTCTTCTTTGTAAGGCCACGTTTAAAAGAAAATGTCATTTGTTGGAACATGTGAGATCTCATTCTGGCAACAAACATTTCTTCTGTCAGCTCTGTCAGGCGCGATTCGTACAAAAAAGTCATTTAACTGTTCACATGAGAAAGCATACTGGTGGCAAACCGTTCTCGTGTGACCTGTGCGAGCTTAAATTTGCACGAAAATCTGGTTTAACGAATCATATGAGCACTCATACTAAGGAAAAAAAACCTTTCTCGTGCGATATATGTGAGGTGAAGTTTGCACAAAAGTCATACTTATTGAATCACATGATAGTACATACTGGCGAGAAATTTTTCTGTTGTGATCTATGCGAGGTTAAATTTGTATGCAAATCTGACTTATCGTATCACATGAGATGTCACAATGGCGACAAACCCTTATCACGTAAAGTGTGCCCCGGGACATTAACTCAGAAAAGTCAGTTAACTGCTCATATGAGAACTCATACGCGCGAGAAACCTTACTCTTGCGGTCTTTTGCCGAAGAAAAGTACGAAGAACCAGCGCGTAGCAGATGGAACACCGTGCTCTGATCCCGGCCATATTTGCGATGAAATATGTGAAAACCAAAACCCACTTCTTGTACCCATGTGGACTATACAAAATAATCATTTAAATAGTGACGTAAGCTATCACATGGGCGTTGAACTTTTCTCCTGTCACCTTTGTGAGGCCACGTTTAAAAGAAAATGTCATTTGTCGGAACATGTGAGATCTCATTCTGGCGACAAACATTTCTGTCAGCTCTGTCAGGCGCGATTCGCACAAAAAAGCCATTTAACTGTTCACATGAGAAAGCACATTGGCGATAAACCGTTCTCGTGTGACCTGTGCGAGCTGAAATTTGTACACAAATCTGATTTAACGAAACACATGAAATCTCACACTGGCGACAAACCTTTCTCATGCGAGATATGCGACGAGAAATTTGCACGAAAATCATATTTATTAGGCCACATGACAGTTCATACCGGCGAGAAACCTTTCTGCTGTAATTTTTGTCCCGCAAAATTTACGCAGAAAAGTCACTTAACTGTTCACGTGCGAAatcatactggtgaaaaaccttactcGTGTGACATATGTCAAGATCGATTTACACGCAAATCTTACTTAAACAACCACATGAGGCTTCACACTGACGAGACAAGCTTCACGTGTGACCAATGTTCTAGGAAATTTTCTCACAAGAGTAGTTTAACTttacacatgagaactcacactggagaaAAACCTTTCGCCTGTGAGATATGTGAGATGAGATTTGTAAGAAAATCATATTTAATAAGTCACATCAGGACTCACTCCGGCGAAAAACCTTTCTCTTGTGAGCTATGTTCCGCGAAATTTGCACAAAAGAGTCACATTATGTTACACATGAGAATTCACACTGGCGAGAAACCTTTCTCCTGCGAGCTGTGCGAGGAGAGGTTCTCACGCAAGTCGCATGTACTGGGCCACATGAGAGTTCATACTGGTGTAAATCCTTTTTCTTGCGAATTTTGTCCCGCGACGTATTCACAAAAGAGTCATTTGACTTTCCACATGAAATACCATAATGGTGCGAAACCTTTTCCTTGTCCATTGTGTTCCTCGAAGTTCACTCAGAAAAGCGCTTTTTTGCCGAAGAAAAGTTCGAAGAACCAGCGCGTAGCAGATGGAACACCGTGCTCTGATCCCGGCCATATTCGCGATGGAACATGTGATAACGAAATTCCACTGCTTGAACCCATGCAATCTATACAGTATAATCTTTTAAATAGTGACATGGACGTTAAACTGTTGTCCTGTCACCTTTGTGAGGCCACGTTTAAAAGAAAATGTCATTTGTCGAAACATGTGAGATCTCATTCTGGCGACAAACATTTCTTCTGTCAGCTCTGTCAGGCGCGATTTGCACAAAAAAGTCATTTAACTGTTCACATGAGAAAGCACACTGGCGACAAACCGTTCTCGTGTGACCTCTGCCCCGCGACAtttatgcaaaaatatagtttaacttttcacatgagaactcacactggcgaaaatcTTCACTCCTGTGAGATATGCGAGGAGAAGTTCGCGAGAAAATCTAATTTAACgaatcacatgagaactcacgctGACGATAAGGCTCTGTCGTGTGACATATGTCAAACCAAATTTAGACGACAGTATTATTTAACGAGGCACATGAAGAGTCACACTGGCGAGAAACCGTTCTCTTGTGAGCTATGCGGCGCGAAATATTCACAAAAACGTAATTTGAACATTCACATGAGAACACATACTGGCGAGAAACCACACACGTGTGAGGTATGCGAGGAGAAGTTCGCGAGAAAATCTTACTTAACGAGTCACATGAGGACTCACACTGGCGAGAAACCTTTCTCTTGCAGCCTGTGTTGCGCGAAATTTGCACAGAAGAGTCACTTAACGTTACAcgtgagaactcacactggcgagaaACCTTTCTCATGCGATATATGCGGGGAGAAATTCGCACGAAAGTCATATTTAGTAGGCCACATGACAGTTCATACTGGCGAGAAACCTTTCTCTTGTGATCTTTGTCCTGCGACGTACACACAGAAGGGTCATTTAACTTTCCACATGAAATACCATAACGGTGAAAAATCCTTTCCTTGTCCACTGTGTGCGTCGAAGTTCACTCAGAAAAGTAATTTAACCACTCACATGAGAGGTCACTCGGGCGAGAAACGCTTCTCGTGTGATCTGTGCGATGCTAAGTTTATTCGCAAATGTCAACTAATGCGTCACATGTTAGCGATTCATAAAGTTTAA
Protein Sequence: MRKHTDDKPFSCDLCELKFVHKSDLTKHMKSHTGDKPFSCEICDEKFARKSYLLGHMTVHTGEKPFCCGLLPKKSTKNQRVADGTPCSDPGHICDGKCDNENPLLVPMRSIAYNLLTSDMDVELFSCLLCKATFKRKCHLLEHVRSHSGNKHFFCQLCQARFVQKSHLTVHMRKHTGGKPFSCDLCELKFARKSGLTNHMSTHTKEKKPFSCDICEVKFAQKSYLLNHMIVHTGEKFFCCDLCEVKFVCKSDLSYHMRCHNGDKPLSRKVCPGTLTQKSQLTAHMRTHTREKPYSCGLLPKKSTKNQRVADGTPCSDPGHICDEICENQNPLLVPMWTIQNNHLNSDVSYHMGVELFSCHLCEATFKRKCHLSEHVRSHSGDKHFCQLCQARFAQKSHLTVHMRKHIGDKPFSCDLCELKFVHKSDLTKHMKSHTGDKPFSCEICDEKFARKSYLLGHMTVHTGEKPFCCNFCPAKFTQKSHLTVHVRNHTGEKPYSCDICQDRFTRKSYLNNHMRLHTDETSFTCDQCSRKFSHKSSLTLHMRTHTGEKPFACEICEMRFVRKSYLISHIRTHSGEKPFSCELCSAKFAQKSHIMLHMRIHTGEKPFSCELCEERFSRKSHVLGHMRVHTGVNPFSCEFCPATYSQKSHLTFHMKYHNGAKPFPCPLCSSKFTQKSAFLPKKSSKNQRVADGTPCSDPGHIRDGTCDNEIPLLEPMQSIQYNLLNSDMDVKLLSCHLCEATFKRKCHLSKHVRSHSGDKHFFCQLCQARFAQKSHLTVHMRKHTGDKPFSCDLCPATFMQKYSLTFHMRTHTGENLHSCEICEEKFARKSNLTNHMRTHADDKALSCDICQTKFRRQYYLTRHMKSHTGEKPFSCELCGAKYSQKRNLNIHMRTHTGEKPHTCEVCEEKFARKSYLTSHMRTHTGEKPFSCSLCCAKFAQKSHLTLHVRTHTGEKPFSCDICGEKFARKSYLVGHMTVHTGEKPFSCDLCPATYTQKGHLTFHMKYHNGEKSFPCPLCASKFTQKSNLTTHMRGHSGEKRFSCDLCDAKFIRKCQLMRHMLAIHKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -