Hsem008203.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hipparchia semele
Gene Symbol
ZBED4
Assembly
GCA_933228835.1
Location
CAKOGE010000041.1:2857188-2862224[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.4e-08 9.7e-06 25.9 0.2 1 44 5 47 5 47 0.88
2 5 1.2e-13 8.3e-11 42.1 0.2 1 44 142 184 142 184 0.97
3 5 4.9e-14 3.3e-11 43.3 2.9 1 44 241 283 241 283 0.98
4 5 1.7e-11 1.2e-08 35.2 0.6 3 44 353 393 351 393 0.96
5 5 3.7e-07 0.00025 21.4 4.6 5 44 482 520 479 520 0.93

Sequence Information

Coding Sequence
ATGGAATGGGACAGTAAATTAAAGGATTTTTTTGTGAGTAATGAAGAGACTAAATTGGCCGTATGTAATTTATGCAACAAAAGTATATCATTCAAAACTACTGTTATCAACTTAATGCAACACTTGGCGTTGGCACACCGTGAAGCCCTTCTCAATAGTTTTCCAGTTGTTATCAGTAACGAAGATGAGCTCCCTGATAATGCTCCAGTCCCTGTGGTAATATCATGTGACTCTTGGAGTTTCTTTGAGACTGTTGAGGGTTCAACAACAGCTACATcAACTTCACAAAATAGTCTTGACAAAGAAAGTGATTTAGAAGATGACAACTTAGATGAAGAAAATGCTTTGGAAAGTAATTCTGAAAATGAACATTTGCTTGCAGATGATATTTTTAACTCTTCAAAGACTACAAGAAATAATAGAAGCGACATTTGGAATTTTTTTGATAAGATTCCAAATACACAAGTGGCTATGTGCACTCTCTGCCAAAAAAACTTATCATACAGAAGCACAGCAACTAATTTAAGAGATCATATGAAAAGAAAACACCCAGTAGCATATAATCTACATtttgtttcatcaaaatcaacaaatcaacaaaatgaTTCTGAAGAAAACAACTCAGACACAGAAAACTCTCATGTAGAATATAATTCTGAAGATGAACAGAACGAAAACGACAATATGTTTAACTCTTCAAAGACTATAAGAAATAATAGAAGCAACCTTTGGAATTGTTTTGATAAGATTCCAAATACACAAATGGCTACATGCACTCTGTGCCAAAAAAACTTATCATATAGAAGCACAACAACTAATTTAAGACATCATTTAGAAAGAATCCATCCAGTAGCATATAATCTACAAtttgtttcatcaaaatcaacaAATCCACAAAATAACTCTGAAGAAAACAACTCGGACCCAGAAAACTCTCATGCAGAAAATAATTCTGAAGATGATCATAATGAAAACGATAATGAAGAAAACTTTCAAGTGGAACACAATTCTGAAGATGAACAAGTTGAAGAAGTTGAAAAAACGAATCGATTTGATATTTGGAAAGTTTTTGATAGGATTGAAAACACTAAAATGGCTATATGTACCCTTTGCCAAAAAAATATGTCATACAAAAGCACAACAGCTAACTTAAGAAATCATATAAAGAGAATACACCCGAAAACATATTTTCAAAGGTCAGAATACCTTAATGGAAAGGAAGATGCTACTTCTGAAAACGAAAACTTTCATAAGGAAAATAATTCTGAAGAAGTATGCTTACATAAAAATAGTATGTTATACTCTCCAGGAAGTTATAAAAGTGATATAAAAATAGAAACTACTAGAGAAGAAGACTCACAGCAACCTGATAGGAACTGTTCAGAAAAATTTAGACAAGATAATTTTAGTTACCTTTCAAAATATTGCAATAGGGATATTATGAACTTTTTTGAAagaaatgataaaactaaaatgtTTCATTGTAAACTTTGCCAAAATCCAATTTCATACAAAAGTTCTATTATGCATTTAAAACAACatttaaaacataaacacaAAGACGAGTATCCTGATTTTAGTTCAAGGTCAGaaccattaaaaaatatttacgaaGTATATATTTCGGCAGGTGAAGATCAAGAACAAGAAGATTCTAGAGAAAAACAAAGTACTATtttcaattttgataaaatcaatCATATTGGAAGAGGCGATGGGGAGAACAAACACAATGATACTCAAATGGACCCTTTTGATAGTGACGAAAATATAACAGAAGAGCCCCCCAAAAAAATACAACGAATTAGCTCAATTAATTGGGCATATAAGATTCAGCctgatgaaaaaaaatacattgatAGGTGTCTATTAAAACTAATAACTGAAGACTTTCAGCCATTTAGCATTGTAGAGGACAAAGGTTTTCAAGATTTTATAGCGGTGTTAAACCCAAATTATCAGTTGCCAACCCAGACAACTCTTTCAAGTCTTTTAACCGAAGAATATACAAGAAAGTTGGCTGAATTTAAAGAGTTCATACACAGCTGTTCAAGTATCTCTCTGTCAGTGGATTGCTGGTCATCTAGGAATATGCAAAGTTTCATGACTGTAACAGCACATTTTATCGATCAAAATACATTTGAATTTTGCTCAGTATTAATAGAAAGTGCAGGCCTTCATGTACAAGATACACCAGAAAAGATTGCTACACAACTGCGTCAGGTTACAAGTAAGTGGGATATAATAGATAAAgttaaatttattgtttttgaaaATGCACCCAAAATGGTGTCTGCAGCAAAGATCCTTAACTGGCCGCACTTTACATGTTTTGCTAataaatttaattcaattgtGCAAGAAGCTCTGAACAGTGAATCAATAGCTGAAATTGTGGCAAAGGTACAAAAAGCAGTGGAATATTTCAAAAGGAACTCTGTGGCTAAGGAAATGCTGCATGAATACCAAGTCAATACTCAAAAGGTCGCGCAACCGAAGGGGATCGTGTTGGCAATTCCCACTTGCTGGATTACTGTTTGCAAAATGTTGAAGAGATTTAACGAGTTGCGGGAAGCTGTACGGGCAACTTTCTCAGACATCGACGAGGAGATTCCTGCTATTACGACAGTTGAGTGGCAATGTATTGATCAATTGGTGGAGATTCTAAAACCTTTTGAGGAAGCTGCGACTATAATGAGCTCTGAGAAATATCTGATCGCCGGGAAAGCGGTAGTGCTATCGGCTGGGCTGTACAAAGTATGTATAGATTTAGCTGAACGAAATTTCTGTGAGCCAATCTCTAATTTAATATTGAGACTGAAGAATGACTTGTCTACAAAACTTTGCGACATTGAAAAAAACGAGGCAATTGCTGTGTGTACCCTTTTGGATCCAAGGTTTAAACAGCATGCTTTTGAAGATCATACAGCAATGTTGAATGCCAAAGAATGTGTGTTGCAAAAATTGAAACAGTTAAATAACGGACATAGCGTCGACAGTGCTGGTTCATTATCAACAACAACAAATATAAACAATGATTCCTCACTATTGGGCAGGTTTTACACCAAAGTAGCATCATCTTACCACCCGGAAATGACAGAGCATAGAACTATGGATGAGTTAAACAGGTATTTATCTGAAAATGTGATACCTCCAACAGAATGTCCGCTGCGTTGGTGGAAGGAGCGGCGAATGTTGTATCCAGGCTTAAGTAAGATTTTTGTTGCCTCCTCTAACATAGTTGTCACATCAGTTCCATGTGACAGAGCTTTCTCAAAAAGCGGTTACGTATTGTCGGACAGACTGAACGGTCTAACTACCTCTAAGGTagataaaataatgtttctaaacgttaataaataa
Protein Sequence
MEWDSKLKDFFVSNEETKLAVCNLCNKSISFKTTVINLMQHLALAHREALLNSFPVVISNEDELPDNAPVPVVISCDSWSFFETVEGSTTATSTSQNSLDKESDLEDDNLDEENALESNSENEHLLADDIFNSSKTTRNNRSDIWNFFDKIPNTQVAMCTLCQKNLSYRSTATNLRDHMKRKHPVAYNLHFVSSKSTNQQNDSEENNSDTENSHVEYNSEDEQNENDNMFNSSKTIRNNRSNLWNCFDKIPNTQMATCTLCQKNLSYRSTTTNLRHHLERIHPVAYNLQFVSSKSTNPQNNSEENNSDPENSHAENNSEDDHNENDNEENFQVEHNSEDEQVEEVEKTNRFDIWKVFDRIENTKMAICTLCQKNMSYKSTTANLRNHIKRIHPKTYFQRSEYLNGKEDATSENENFHKENNSEEVCLHKNSMLYSPGSYKSDIKIETTREEDSQQPDRNCSEKFRQDNFSYLSKYCNRDIMNFFERNDKTKMFHCKLCQNPISYKSSIMHLKQHLKHKHKDEYPDFSSRSEPLKNIYEVYISAGEDQEQEDSREKQSTIFNFDKINHIGRGDGENKHNDTQMDPFDSDENITEEPPKKIQRISSINWAYKIQPDEKKYIDRCLLKLITEDFQPFSIVEDKGFQDFIAVLNPNYQLPTQTTLSSLLTEEYTRKLAEFKEFIHSCSSISLSVDCWSSRNMQSFMTVTAHFIDQNTFEFCSVLIESAGLHVQDTPEKIATQLRQVTSKWDIIDKVKFIVFENAPKMVSAAKILNWPHFTCFANKFNSIVQEALNSESIAEIVAKVQKAVEYFKRNSVAKEMLHEYQVNTQKVAQPKGIVLAIPTCWITVCKMLKRFNELREAVRATFSDIDEEIPAITTVEWQCIDQLVEILKPFEEAATIMSSEKYLIAGKAVVLSAGLYKVCIDLAERNFCEPISNLILRLKNDLSTKLCDIEKNEAIAVCTLLDPRFKQHAFEDHTAMLNAKECVLQKLKQLNNGHSVDSAGSLSTTTNINNDSSLLGRFYTKVASSYHPEMTEHRTMDELNRYLSENVIPPTECPLRWWKERRMLYPGLSKIFVASSNIVVTSVPCDRAFSKSGYVLSDRLNGLTTSKVDKIMFLNVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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