Hsem012143.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- clz9
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000169.1:1822201-1829586[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-10 1.5e-07 31.4 0.0 4 35 17 49 14 56 0.89
Sequence Information
- Coding Sequence
- ATGGTCCGACATTATAAGAGGATTAAAGAAAAAAGTTATTCAGAGCGGCAACTAGAACAAGCAGTTGATGctgttaaagaaaataaaatgacGCTCAGCCAAGCGGCAAAATTATTCGAAATACCAAGAACAACAATTTCTTTTAGATTAAATCATTGTGTAATGACAAGAGCTGGACACCCAACAGTTTTTTCTCCAGAATTTGAAAAAAGAATGGCGGATTGCTTGCACACAATGGAGAAATGCGGCTTCCCATTAACAAGAAAGGAAGCCTCTGTATTGATTTCAGAGTATGTGCGTCAAAATGGCTTGGTCACACCTTTTAAGAACCAAATTCCAGGAAAAGATTGGTTTCACTCCTTTCAGAAGAGGAATgaactttcaattaaaaaaccaCAAAATGTAGAACTTGCAAGAAAAAACGCTTGCGACCCGTTCATCATTTACGGTTATTTAGATTTGATGGAGAGCGTACTACAAGAATTAGAGTTAAAGGAAAAACCCAAACAAATCTACAATTTGGATGAAACGTCCATTTGCAATGACCCAGTTAAGGGTAAAATTATAGGAAAAAAAGGTTTTAAGGCCACTAGAACAACCAGCGGACCTGGACGCAATAATACAACCGTTCTTTTAGCTACAAATGCTTGCGGTGACAAAATTCCTCCACTGATTATATTCCAGGGAAAATTTCTCTGGAATCAATGGTTTTACGCCGAGGAACAAGTTAAAACCGCTTACGCGGTTAGTGACAAGGGCTGGATGGAGACTTCTATTTTTGAGAAGTATATGAGAGATGTGTTTGTCCCCGCGATAGGTCCAGAGAGACCAGTCCTCTTAATATTTGACGGACACAAAACACATGTAACTTTGGGTGTGATAGAATACGCGGCGTCTCAAggtataacaataattaaactTCCACCACATACCTCTCACGTATTGCAGCCGCTGGATTTAAGCACCATGAAGCCCTTAAAGGACAGATGGGAAGCTGAATTAATAACATGGCAGAGACGTCATATTGGGTCACGATTACCTAAAAGCGAATTTTCACGAATTCTCACCAAAATATGGAGTGAGATGAATCCTGTCATTTTGGCCAATGGGTTCAGAAAAAGTGGAGTTTATCCATTTGACCGCGAAGCTATTCCTAAAGAATTATTCGATccagtaaaatacaaaaaatgggAGAACCGTGAAGTTTTGAGCCCTGCGTTATTACCTTGCGACGCTGAACTTACACAACCAGGACCAAGTACAATGTGTTTGGAACGCAAAATAATTAATGACGATTCAGAAAAAGACTCTGTGTTATTGCCTTGCGACGCTGAACTTACAAAACCAGGACCAAGTTCAATGAGTTTGGCACGCAACATAATTGACAGTTCAGAAACATCACAAAACCAGGAACAAGATGAACATCTACTGCAGTTGCTCGGCAACACTGGGCTATCAGAACCAGTACCAAGTTTAATGAGTTTGacaatgaaaataattaatgGAGGTCCAAATCAATTAGGAAAACACGAACAACATGACCACAACACTCCAGAAAAACCAGACCCAGatACCGACAGCAACAGCACAGGGTCATTCGAGTGTGTTGATGAGTCTGATAATGACACAAAGAGTTTTTATAGAAGCGTTCTTGATCAGCTATCTGATGAGGAAAATGTTAATGAACCATCTACAAGTAATGTTGATGCTGACTTTGCTGGAGCTAGACATGAAGTAAAAGAACTAGCAGAGAATTTTGAAGGACTTGTAGACGCAATTGAGGAGTTGTATGATGGACGAGAAAATGAAGACACCAGAGGTGTAAAGATCGGGGTGAAGTCAGCGGAACAATTTACAAGCAGGATAATCAGGGAATAG
- Protein Sequence
- MVRHYKRIKEKSYSERQLEQAVDAVKENKMTLSQAAKLFEIPRTTISFRLNHCVMTRAGHPTVFSPEFEKRMADCLHTMEKCGFPLTRKEASVLISEYVRQNGLVTPFKNQIPGKDWFHSFQKRNELSIKKPQNVELARKNACDPFIIYGYLDLMESVLQELELKEKPKQIYNLDETSICNDPVKGKIIGKKGFKATRTTSGPGRNNTTVLLATNACGDKIPPLIIFQGKFLWNQWFYAEEQVKTAYAVSDKGWMETSIFEKYMRDVFVPAIGPERPVLLIFDGHKTHVTLGVIEYAASQGITIIKLPPHTSHVLQPLDLSTMKPLKDRWEAELITWQRRHIGSRLPKSEFSRILTKIWSEMNPVILANGFRKSGVYPFDREAIPKELFDPVKYKKWENREVLSPALLPCDAELTQPGPSTMCLERKIINDDSEKDSVLLPCDAELTKPGPSSMSLARNIIDSSETSQNQEQDEHLLQLLGNTGLSEPVPSLMSLTMKIINGGPNQLGKHEQHDHNTPEKPDPDTDSNSTGSFECVDESDNDTKSFYRSVLDQLSDEENVNEPSTSNVDADFAGARHEVKELAENFEGLVDAIEELYDGRENEDTRGVKIGVKSAEQFTSRIIRE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00801748;
- 90% Identity
- iTF_00801746; iTF_00801748; iTF_00801747;
- 80% Identity
- -