Hsem016493.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- ZNF236
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000182.1:959956-964696[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-10 2.8e-08 33.6 0.0 4 38 159 194 157 197 0.93
Sequence Information
- Coding Sequence
- ATGGACGAGGTTGAGGATTTTACAATTACTGATTCGACGGGTCGATGCAAGTGCTGTTTGAGTGAAAGTGAGTTACGGATTATGTGGCAGAAACACGAGTTTGAAGGAGAAGAAGAGAATTACGGCGAAATGTTAAAGGAGTGTTTCGGTATTTCGTGGGAACCTTCAGGAATGCCGGAAATGATTTGTGAGGTGTGCGTTTCACGATTGAGAGAAGCAATGGACTTCAAGCTGGAGATCTTGACTGTCCAGGAAATGTTGCAAGAAGGAGTACACATAAATATTAAATCGGATGTGGAACAAGACGCTGCTTCTCAAGCTGACTGTGATACGGAATTCCTTGAATCTTCTGATGATAACGATCCTGAAGATGTACCCTCAAATTCCCAATCGTCGTCACCTGAGCCACAAGAACCGAACTACCTTCTGAAACTACGGGAGCGTAGAAGGAGAAACAAGATATACAGTAGTAGCGACTTGCGTGAAGCCTTGCAAAAGGTTTTGCGCGGCGAGATGTCATTTGCGGAGGCTACGAGGGTCTATGGCGTACCGAAGGCCACGTTGAGAACTAATTTCAACAAAGCAACAAAGGGAGAAATAGAAGACACACCTAAAAATTTAACACATGAGAAGCACGACAACTTAATAGAAGATATCAAAAAACTCCTGACACACACCAACGCTATGCCGTTCAAGACGAAAGCCAACAGATACTACTGCTTCTACTGTTCCAGTGCTGGACCAAGCTTTGAGGACCCAGAAGATTTGAGACAACATAACAAGAAGCACCAACGGGAACGAATTACCAGCATAGAACAGCGTATGAAACCCCAGTGGACGAACGAAGTCATAAAAATGGACATTCTAAACTTGCACTGTACGGATTGCCGCACAGTGCTACCCGATTGGAACAAAATGTTTGTGCACTTTGCTAAAATACACAGCATTGGTTTCGACGAGGCGTACACGAAGATCATACCGTACGCTTTGACCCTAGATTTCATCTGCGTCCTGTGCAACGATAAATTCCACAACTACGGTCACCTCGATGCTCACATGAACCGTCATTATAGTAACTACATATGCTACGAGTGCGGGGACACTTTCCTGGCAGCGAGTCGTTTGGACAAACACCTGTTTGTTCACAAAGTCGGGAAGTACCCTTGTAAAATGTGCGATAAAGTGTTCACACTGGAACGGTACAGGAGGAAGCATGTCACTCTGGTTCATAAACAGAAGCTTGCAGTGAAGTGTTTCTATTGTGCAGAAAAGTTTGTGGACATGCTTCAACGGCACAGACATGTCACCGAAGTGCACAAGGAGAAAGTGAAGACGATCACTTGTGAAGAGTGCGGGAAGCAATTCACTTGGAGGCCGTATTTCCATGCTCATGTCCGGAAAAAACACAAGGGCGACAAGAAATACAAGTGCCAGTATTGTCCGAAGACGTTTCTTATGCCTTACGAGTTAGTGAATCATCAGGTTAGGCACACGAATGAGAAGAACTTTGTGTGTATGTGCGGAGAGAGTTTCAAAAGGGTGATCACATTGAGGAAACATTATCGAGTGGCTCATGGTGATGAAGTAATGATTGATAGTTCATAG
- Protein Sequence
- MDEVEDFTITDSTGRCKCCLSESELRIMWQKHEFEGEEENYGEMLKECFGISWEPSGMPEMICEVCVSRLREAMDFKLEILTVQEMLQEGVHINIKSDVEQDAASQADCDTEFLESSDDNDPEDVPSNSQSSSPEPQEPNYLLKLRERRRRNKIYSSSDLREALQKVLRGEMSFAEATRVYGVPKATLRTNFNKATKGEIEDTPKNLTHEKHDNLIEDIKKLLTHTNAMPFKTKANRYYCFYCSSAGPSFEDPEDLRQHNKKHQRERITSIEQRMKPQWTNEVIKMDILNLHCTDCRTVLPDWNKMFVHFAKIHSIGFDEAYTKIIPYALTLDFICVLCNDKFHNYGHLDAHMNRHYSNYICYECGDTFLAASRLDKHLFVHKVGKYPCKMCDKVFTLERYRRKHVTLVHKQKLAVKCFYCAEKFVDMLQRHRHVTEVHKEKVKTITCEECGKQFTWRPYFHAHVRKKHKGDKKYKCQYCPKTFLMPYELVNHQVRHTNEKNFVCMCGESFKRVITLRKHYRVAHGDEVMIDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00802422;
- 90% Identity
- iTF_00802422;
- 80% Identity
- iTF_00802422;