Hsem017173.1
Basic Information
- Insect
- Hipparchia semele
- Gene Symbol
- retn
- Assembly
- GCA_933228835.1
- Location
- CAKOGE010000183.1:8453149-8466223[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-19 2.5e-16 60.2 0.0 17 89 36 106 31 106 0.95 2 2 4.1 9.2e+03 -2.6 0.0 25 38 233 246 197 247 0.52
Sequence Information
- Coding Sequence
- ATGCAAATAGCGTTTGCACGGTTCTGGGCGCACGCGCATCGAATCGCTCGTTTCCCGCCCGCGCGGAGAGTGGGGGGCACGGCGGTTAGTGGAAATCGTTATTGGGGCACGCCGATCAACCGCCTGCCGATAATGGCGAAGTCGGTCCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGCGGCGGCCTGGTCGAGGTCATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGCCTGCGACTGCCTTCCTCCATCACCTCAGCCGCCTTCACTCTACGCACACAATACATGAAATACCTGTACGACTACGAGTGCGAAAAGAAGAACCTGTCGACGCGGAGTGAGCTGGACGCTGCCATAGAGGGCAACAAGCGCGAGGGTCGCCGCGCTTCTGGGCAATACGACGCACAGGCTGCTTTGGCCATGCCACCTTTGAACAGAATGCCAGCATCCCTCGCGCAGTTGTCGCAACATATGCAACCCCTATCGCTATCGCTCGGAGGGGCCGTAGCAGGGATTCCACGTCTACCACCACTgccgccgcacgcgccgcaTATATCTCAGCACGATATAGAATACCGCGTGCGAGAATACATGAAGATGATTCAGCAGCAACGTGAGTTGATCCGGAATGgttCGGAATCACCTCCGAGTGCTCCAATGGTATCTCCCCGGGACGCAGCGCTGTCAGCCATAGATGTATCACGCCTCACTCTCTGGTCTTTGTACAACAACAATAACAACAGTCCTCAGCCAGATCTCGAGCCACAGCGTGAGGCCTTAAACCTAAGCGAAAGCCCAAACTCAAGCTTAAGCGGTAAGAGGGAAGCGTGTCGCTCCCCTCCCCCGCCCGCGAAGCGCCGCACCCCACGTCCCCCctcccccgcgcccgcgccctccCCGCAGCTGGCCCGCGAGCCGTCCCCGCGCACTTCCCCGCGCACGCATTCGCATCTCAACGGCAACACGAACGGAGTGAACGGAGCTGCCTTCAAGATCACCACAAGAGGAGATGCCAACACAGGTGACCAGCAGCTCGTGGTATCGATTGAACTGAACGGCGTCACGTATGAAGGCGTTCTGTTCCCGTCACAAAATGGCAACGGTCAAAATGGTCACCGGCAAATGGTCTCTTAA
- Protein Sequence
- MQIAFARFWAHAHRIARFPPARRVGGTAVSGNRYWGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRMPASLAQLSQHMQPLSLSLGGAVAGIPRLPPLPPHAPHISQHDIEYRVREYMKMIQQQRELIRNGSESPPSAPMVSPRDAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSLSGKREACRSPPPPAKRRTPRPPSPAPAPSPQLAREPSPRTSPRTHSHLNGNTNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00959952;
- 90% Identity
- iTF_00642129;
- 80% Identity
- -