Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: -
Assembly: GCA_028554975.1
Location: JAHFWI010000046.1:1159007-1165941[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00036 0.027 15.5 2.0 1 23 136 159 136 159 0.94

2 15 0.022 1.6 9.9 0.1 2 23 167 189 166 189 0.93

3 15 0.0015 0.11 13.6 2.1 3 23 201 222 200 223 0.96

4 15 0.00023 0.017 16.2 0.2 1 21 235 256 235 257 0.95

5 15 0.00095 0.071 14.2 0.3 2 23 271 292 270 292 0.97

6 15 0.14 11 7.4 0.3 3 23 297 317 296 317 0.92

7 15 4.4 3.3e+02 2.7 1.5 1 12 324 335 324 338 0.86

8 15 0.005 0.37 12.0 0.7 2 23 507 529 506 529 0.95

9 15 1.2e-05 0.00088 20.2 1.8 1 23 571 593 571 593 0.98

10 15 0.0082 0.61 11.3 0.3 2 21 598 617 597 618 0.94

11 15 0.00098 0.073 14.2 0.1 2 23 629 650 628 650 0.96

12 15 0.3 22 6.4 0.1 1 23 656 680 656 680 0.95

13 15 0.00049 0.037 15.1 3.0 3 23 688 708 686 708 0.95

14 15 0.19 14 7.0 1.1 3 20 716 733 714 736 0.91

15 15 0.0068 0.51 11.5 5.7 1 23 742 765 742 765 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00036	0.027	15.5	2.0	1	23	136	159	136	159	0.94
2	15	0.022	1.6	9.9	0.1	2	23	167	189	166	189	0.93
3	15	0.0015	0.11	13.6	2.1	3	23	201	222	200	223	0.96
4	15	0.00023	0.017	16.2	0.2	1	21	235	256	235	257	0.95
5	15	0.00095	0.071	14.2	0.3	2	23	271	292	270	292	0.97
6	15	0.14	11	7.4	0.3	3	23	297	317	296	317	0.92
7	15	4.4	3.3e+02	2.7	1.5	1	12	324	335	324	338	0.86
8	15	0.005	0.37	12.0	0.7	2	23	507	529	506	529	0.95
9	15	1.2e-05	0.00088	20.2	1.8	1	23	571	593	571	593	0.98
10	15	0.0082	0.61	11.3	0.3	2	21	598	617	597	618	0.94
11	15	0.00098	0.073	14.2	0.1	2	23	629	650	628	650	0.96
12	15	0.3	22	6.4	0.1	1	23	656	680	656	680	0.95
13	15	0.00049	0.037	15.1	3.0	3	23	688	708	686	708	0.95
14	15	0.19	14	7.0	1.1	3	20	716	733	714	736	0.91
15	15	0.0068	0.51	11.5	5.7	1	23	742	765	742	765	0.97

Sequence Information

Coding Sequence: ATGAATACTGGAAAGAGAGTTATCAAAGCAGACAAACAAAACAAAATGAATTCATACAAAATTGTTCATGGACAAACTAGTGAAAATTTTGAGAATATGACCAAAGTAAATCAAATAAACATCTTGAGAGGCTCAACAAAACTTTCTCCGAAAGCTCGTAAAAATATGCTTAATGTGTGTTACAAGGAGATAAAAATTCTTCCCAAATCGACGATTGATAAAAAAGCAAAACCTCTTGTAATATATGATAATAACTTATCAAATAATGTAAAGATACATACTAGCCCTGTAATTATAATACCCACTGGAAGTACTAACAGCACAGTACCTACTTTTTTTAATCAAGAGACAACTATAAAGCCAACCAAGTTGAACTTGAGTAACTCTTTACAACCCAATCTAGTATACCCCTGCTCAAAATGCACTAAGCAATTTGTATCAACGAGTTATTTAAAAACACACTTAGAACAATTTCACGGAGAAATAGGAACCGCGGTTGAATGTTCTCTTTGCAATATTGAGTTCGGATCACAGGAAGAACTCACTGAGCACAATTTGAAAGTTCACTTTCCATCATTCCAACCTCACGATAAAGTAGCTTGCGACCTTTGTAAGAAGGAATATAAAGATAGATATCTACTTGCGAGGCATAAAAAGAAAGCACACCATACGGGAGACTCTAAGTTTACCTGCAACTTTAAGTTTAGCTGCAACTCTAAGTGTGGGGTGGTCTTTTCCACGCAGGAAAGTTTAGTAACTCATCAGAAGAATGATTGCACAGCTATGACATCTTCTGGTAAAAATGATTTAGTATGCAAGCTTTGCAAAGGTGTTTTTGTTAGCAATAGAAGTTTGGCGTTGCACATGAAGTCACATACTGATAACATTTGCAGTTATTGCTGCAAAGTATATGCAAGAGAAAGTGATTTATTAGAACACGTGGTGGAACATTCTGATCAGACAAAGCCATACTCTTGTGCTTATTGCACCAAATACTTCTCAGCTAAGAAGCAACCTATAGCTGATGAGGACTCGGAATCCACGAAAGTAGCCGGCAACTATATAATAACGTATTATGTAGAAGAAGATACGGCAGCAGAAGAAGGGCAATCTGATGGTGCGGAGACGGAACAACTACTCGCAACAAAAGTGGAAGAATATGGTGAAAGTAAAGAGAATGTTACTTGGGAAGAAACAAATAATAGCCAACAATATTTGCACAGTATATCTTGGGGAGAAACTTTGCAAACTAATGAATGTGAGAATTCAGACGCTGATGAAATGGATCTTAACAATGACAAAGAATGTATTGATGAATCGATATCTGTATGTGAGGATGGAAAACATGCCGCTCAAAAAAAAAGTGCTGGTAGAGTTAACATATGCATTAACTCGGATACTGGTAAAGTTACATATCTAGATTCGAAAGGAGACATTGTAAATGAAAAGATGAAGGTCGATTTTGATTTGGAATCTAAAACTGAAGGATTTGGGATTGAAAGTGACCCAGATAAAATGACTTGCAAATGGTGCGGCTTGGGCTTTTCAAAAGTACAGTTCCTGAAGAAACATTTGCAACAAGAACACGGAGTGAGATTTGTCATTGATCACCAGGATTCAAAAATACCAAAAGCAAAAAGTTACAAAATCAAATTAGTGAAGAATGCATCTGCCAGTAAAATAAAACAAACAGATGATGCTGAAGCTCCATATACCTGCAATATTTGCAGCAAAAAGTTTCAAAGATTGGTGAACCTGGAAAAGCATTTGAGCCGGCACGCATTTGGCTGTCCTTGTCCTCGTTGCGGTATCGATACTATCGATAGACACTCTCTGAACGCTCATATGAAACTCTGCAGAGATCCGAAAGTGGCTGAAAAACTTATCTGCCCTACCTGCGGTAAAAGGCTAAAAACTGCCGCAGGATGGAGGTATCACCTACAAACACATTCCAACATTCGCCGCTTTGTCTGTCCCAGCTGTCCATCAAGACGGTTCTTGACAGCTGCCAATCTTAAAGCTCACAATCGAGTTGTCCACTCACAAATAAGACCTCATTTGTGCGTGATGTGTGGAAGAAGATTTGCGTCAACGAATCATCTCCGGAAACATATAGCATCTCATGCAGGGCGCAGGGATCACCTATGCAGCATATGCGGACAAGGCTTTTTGCAGAGCTCTCACGTATCCCAGCACATGTGGGTGCACACGGGGGTCAAACCGCATAGGTGCCCATATTGTCCCAATAAGTACACTGCAAAGTGTTCTCTCACCAAACATCTCCGTAGAAATCACTGGGAACAGCAGAGAAATAAAAGACTAGCAGATGAAAAGATGCAAAGAAAACTTTGCGGAGAAGACATAGACGCTGACGTTTTAGAACCTGATGCTGACTTAAACAAAAAAAACTCCAATATCTCACCGAACAAAAAATATGTTATTGGAAAACCTGACACGTTCACCGAAGATTTTGATTCTGTTAGAGTAAATATCCCGCTGGATGATGACGATTGTACTGTGAATAACAATGAAGTTTTATTAGATAAGATCGACAGCTATCAAAGTAATAGTGATCAGTTAACTTTAGAAGATGTCAATAATATTCAAAACGGCAGGCGCTCACGGCCCATACTAATCAGAAGCCAGAAAAAAATCAAAGCTCCTAAAATGTCACTCAATATTGTACACAATAGTAATTATACCGAACATGTATCGTTAAATGAGATCGATAATCATGCAAATATAGATGAACTGTCATTAAATGAAGACAATAACTGCGGTGGTGAAATATCGCTAGAATCGGTTGATAATGAAGTGGAAAATAATGACAATGAGATATCTCTGAATGATGAAAATTTGATTATGGGTGAAGAAATGACGGAACAAGATTTCGTTGACGGAGTCAATGTTGTAATTGTTGATGTCAACGGACACATTGTTGACGGTCAAAGCGGCGATGTTATAATCGGTATTGATGGCACTGAAGAATATGCCATAAAGTATGAGCAAGATGAAGATAGCGATAATGAGGATAATGTATGA
Protein Sequence: MNTGKRVIKADKQNKMNSYKIVHGQTSENFENMTKVNQINILRGSTKLSPKARKNMLNVCYKEIKILPKSTIDKKAKPLVIYDNNLSNNVKIHTSPVIIIPTGSTNSTVPTFFNQETTIKPTKLNLSNSLQPNLVYPCSKCTKQFVSTSYLKTHLEQFHGEIGTAVECSLCNIEFGSQEELTEHNLKVHFPSFQPHDKVACDLCKKEYKDRYLLARHKKKAHHTGDSKFTCNFKFSCNSKCGVVFSTQESLVTHQKNDCTAMTSSGKNDLVCKLCKGVFVSNRSLALHMKSHTDNICSYCCKVYARESDLLEHVVEHSDQTKPYSCAYCTKYFSAKKQPIADEDSESTKVAGNYIITYYVEEDTAAEEGQSDGAETEQLLATKVEEYGESKENVTWEETNNSQQYLHSISWGETLQTNECENSDADEMDLNNDKECIDESISVCEDGKHAAQKKSAGRVNICINSDTGKVTYLDSKGDIVNEKMKVDFDLESKTEGFGIESDPDKMTCKWCGLGFSKVQFLKKHLQQEHGVRFVIDHQDSKIPKAKSYKIKLVKNASASKIKQTDDAEAPYTCNICSKKFQRLVNLEKHLSRHAFGCPCPRCGIDTIDRHSLNAHMKLCRDPKVAEKLICPTCGKRLKTAAGWRYHLQTHSNIRRFVCPSCPSRRFLTAANLKAHNRVVHSQIRPHLCVMCGRRFASTNHLRKHIASHAGRRDHLCSICGQGFLQSSHVSQHMWVHTGVKPHRCPYCPNKYTAKCSLTKHLRRNHWEQQRNKRLADEKMQRKLCGEDIDADVLEPDADLNKKNSNISPNKKYVIGKPDTFTEDFDSVRVNIPLDDDDCTVNNNEVLLDKIDSYQSNSDQLTLEDVNNIQNGRRSRPILIRSQKKIKAPKMSLNIVHNSNYTEHVSLNEIDNHANIDELSLNEDNNCGGEISLESVDNEVENNDNEISLNDENLIMGEEMTEQDFVDGVNVVIVDVNGHIVDGQSGDVIIGIDGTEEYAIKYEQDEDSDNEDNV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -