Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: -
Assembly: GCA_028554975.1
Location: JAHFWI010000045.1:3931782-3947581[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.6 2.7e+02 3.0 1.2 9 23 50 65 41 65 0.83

2 18 0.13 9.6 7.5 4.0 1 20 246 265 246 267 0.93

3 18 1.2 87 4.5 0.6 2 23 335 358 334 358 0.91

4 18 0.00026 0.019 16.0 1.1 3 23 366 388 364 388 0.94

5 18 0.0092 0.69 11.1 1.4 1 23 394 416 394 416 0.94

6 18 0.0043 0.32 12.1 4.0 1 23 422 444 422 444 0.99

7 18 0.25 18 6.6 0.0 3 21 456 474 454 475 0.92

8 18 0.00074 0.055 14.6 1.5 1 20 564 583 564 586 0.95

9 18 0.16 12 7.2 5.8 1 23 593 615 593 615 0.95

10 18 0.0029 0.22 12.7 1.8 1 23 645 668 645 668 0.94

11 18 0.37 28 6.1 0.1 1 23 675 698 675 698 0.96

12 18 0.00044 0.033 15.3 0.8 1 23 720 743 720 743 0.98

13 18 3e-05 0.0023 18.9 1.4 1 23 759 781 759 782 0.96

14 18 6.6e-05 0.005 17.8 2.1 1 23 791 814 791 814 0.97

15 18 9.5e-06 0.00071 20.5 2.6 1 23 820 842 820 842 0.97

16 18 0.00012 0.0087 17.1 1.3 1 23 848 870 848 870 0.98

17 18 4.8e-05 0.0036 18.3 0.2 1 23 876 898 876 898 0.98

18 18 0.00057 0.042 14.9 2.3 1 23 904 927 904 927 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.6	2.7e+02	3.0	1.2	9	23	50	65	41	65	0.83
2	18	0.13	9.6	7.5	4.0	1	20	246	265	246	267	0.93
3	18	1.2	87	4.5	0.6	2	23	335	358	334	358	0.91
4	18	0.00026	0.019	16.0	1.1	3	23	366	388	364	388	0.94
5	18	0.0092	0.69	11.1	1.4	1	23	394	416	394	416	0.94
6	18	0.0043	0.32	12.1	4.0	1	23	422	444	422	444	0.99
7	18	0.25	18	6.6	0.0	3	21	456	474	454	475	0.92
8	18	0.00074	0.055	14.6	1.5	1	20	564	583	564	586	0.95
9	18	0.16	12	7.2	5.8	1	23	593	615	593	615	0.95
10	18	0.0029	0.22	12.7	1.8	1	23	645	668	645	668	0.94
11	18	0.37	28	6.1	0.1	1	23	675	698	675	698	0.96
12	18	0.00044	0.033	15.3	0.8	1	23	720	743	720	743	0.98
13	18	3e-05	0.0023	18.9	1.4	1	23	759	781	759	782	0.96
14	18	6.6e-05	0.005	17.8	2.1	1	23	791	814	791	814	0.97
15	18	9.5e-06	0.00071	20.5	2.6	1	23	820	842	820	842	0.97
16	18	0.00012	0.0087	17.1	1.3	1	23	848	870	848	870	0.98
17	18	4.8e-05	0.0036	18.3	0.2	1	23	876	898	876	898	0.98
18	18	0.00057	0.042	14.9	2.3	1	23	904	927	904	927	0.96

Sequence Information

Coding Sequence: ATGAAAGCAGCAAATGTAGTTTTCTTAGCAAAGAGAATTTGTGGACTGGATCTCAAAGAGCTTCGCTTAGCCATACCCCATTCAGTGACTCATATGACAGAAATGAAAAAACCCACTGTCTTCTCTTGCATATTATGTACAAAAACTGGATATTCCCAATTTCAGGAACTTCGACATCACATGCAATCTGAACACTCTTTAATGAAGCAAAGGATCATGCAACAAAACGCCAAAAAGGCACCCAAATTATATCCCAATACAACTAGGGAAATAAAGAGTGAAAGAAACGCAGATATACCAATGAAAAATAAAGTTGTCAAATCTGTGGAAGTCATAGAAGTTCCTCCTGAAAATAGTCACGATGGTGATGATGATGATTGTTTAGAAATGGCAGAAGTGGAGTGGCTCGATGAAGACACCGGACTCATGGTGAACATTTTGAGAGTGGTTGAGAAAGGACAATTTGACACAGAAGAAGGTGTTAACATCGGTGCCGATGGAAGCTATGGAAGTTCTTCAAATAATCTTCTTGATCATGCATACTTTGAAAATCAAAATGACGAAGATGCGTCGGACTCTGATTCGGACAGCGGCGTATGGATTGTTCAGTCCGGTGACGTCTGGCTAGAGGGTCAAGACATGGAGGTGCCGTCTGACAGCGATCACAAGCCGATAGTCGAAGATCAGGAAGTCGCCCAAGAAGAATTGCAGAGCGTCTTGATTGCTCCGAGGATGCATCAGTGCCGAGATTGCAAAAAACGGTACAGCACAGCTGAAAGAATGGCCCGTCACGTTTGTCATTTCAAAGTGGATATTGACGGTGGTCATTTTGAATCTAGCAACAAAATGGCGGGAGAAAATGGCAGTCACCGTTGCCCATTCTGTGATTCTACGTTCCACACTAAGATCCGATTGCAGTTTCACACACGTCATTTTCATCTGTCGAGTGCAAACGCCGATGAAGGGGAATCCAGCACACTCGCAGCGGGTGCCCAATCCCTGCGATGTTCAATGTGCCCCCAGAAGATGTTCGAAAGCGAAGCTACCCTGTATGATCACATTCATTTCGCGCATCCTCGTGCTCGGAGGCATCTGTGCCCCGAAGAAGGCTGCGGAAAAGCGTTTCATCTCAAggcatcgttaaataaCCACATCAGATCTCATGCTGGAGAGCGAACTCACCGATGTGAAGTGTGTGGAAAGCAGTTCTTCGATAGGCAAACTTTGGGAGAACACAGTGTCACACATCTCAAGGTGAAGCCATTCCAGTGCCACATCTGTCTGAAGTTCTTGAACAGGAGGTCGCGCCTCCGAATGCATTTGCTGACTCACGAGTCGGAGCCAATTGGTGCCATGGTAATCGCTTGCGGAAACTGCGACATGGCATTCAAGGACACTGAACAGGCAGAGGCACATCTCAATGAGCTGGGTCAGTGTTGCGAATCTACTGAAATACAAAACCCCGACAGTCCGAGTTCTGTTCAAAAGAAAGCGGTTCCGTCAAAAGATGATAGCGTAACAAAAGCTGATAGTGTTAAACCCAGAAGTAATGTCGCCGTGGGCAAGAGCAAGCCTGCAGTTTTGACACAGGAGGGCGTTGATCATTCGGAAACCACGGATTCTTCACTGCTCGACGGGCTGTCTGAAGTTGCCAAGAAGACGATGACGGCGGTGAAGATAGATAAAGTGTACAGATGCGAGTATTGTGAGAAAGTTTACAGTGTTCAAGACGCATTGAATGTTCATCGATCGTGCCACGAGGGTTTGAAAAATCCTTTCATCTGTCACATATGCGGTGCTACTTTCTCCACCTACTCAAGGTGTACCACTCATAAAACGACCCATGGATATTACAGAAATAACTCTTCAAAGAGTAGTGAAGGATCACAAGTCACAACCTCGAATCATGATCAATTTCCGGTTGTTAAACATTTTCTCTGCGAGGTTTGCGGTAAATCGTATCTGCACTGGACTTATCTTCAAGTTCACCGAAGACAGAAGCATTCAGATAATGTCCACATGTACAAGTGCAGGCTATGCGGAGACGAATTCCCAAACAGTTGGGGGATAGCTTATCATCGGAAGAAAGCTCACGGTCAGACTAGTGGCTCAGCAGCTCAGACCACCACTCCGATGCCTTCCATAGAAAAGTTCAACTATTCTTGTGCAGAGTGTGGTGTCGTGGTAAAAAACAAAACCCAACTCTTGGTGCATCGGCGCTCATGTCACGCCACAAGCAATGTTAATTCCAAGAATAATGCCAAACAAGGTCTGTATTCCTGCACAGAGTGTGGTAAACGATATATCACGCAAGTTGGCCTCAAGGGACATTTGAAAAGTCATCATGAGCCCGATTCCGGTGGAAGACCTCACCGATGTCTAGAATGTGGCAAGACATTTGTACATGCCACGGGGCTGACAACACATGGAAGGAGGGTCCACATGAAAGAGACGAACTTTGCTTGCTCGAActgcggtaagacattctacagcgcgtgcgatctgcagagccatttaaggcgacacaccggtgaacgccccttccggtgcgacgtttgcgggcacgccttcagaacaaagggAATGAGAAATGAGCATCTTAGAATTCACACGGGAGAACGTCCTTATCCATGCGACTTATGCGGGCTGGCCTTCCGGAGGTCCTATGCCATGAAGAATCACCGCCTGATTCACACCGGAGAAAGACGATACAGATGCTCTCTTTGTCCAAGGGCTTTCAGAGTTCGAGCGGATCTTAATACCCACTTCAGACATAAGCATGGATCCGAAACTACAGCTTCAACCGAGGCGCAGCCACCAGTAATGGTCGTCAACATGCCAAATGAATTCACCAAAAACCATCACGAAGAAATACTCATCGATCTGAATAACATGAAGACCGAACACATCGAGAGCCTCGAAGGAAGAGTAGATGCTTCCGGAATTATCATATTCAATGAACAAGGCGTCGAGAGTATGCTGCAAAACGATCAAGTTTTAAAACTACAGAAGCCTACCAAAGCAATAAATTCTGATGAGAACGCGTTAATGAGGGGCGTTACCATTGAGACGGTGGACAGCTTTGTTGAAGATAATTATAATTCGGAAGACCTGTTGCCTGAGGGCGATTCTAAGTTTGTGAAGGTTTGGTCGGACACCGAGGATAGTGGAGGCGGGCAGGTGGACCATGTCAATATGGACGGGTCCAAGTCTCCGGATGATGCCCGCCGCTCCGTGTCATGGCACGGAGAAGGTCTTGGAATATGCTGCTCGAGATATGAATGCGATCCGAAAACTTGCTTTTGCTGCGGTTTCTATGACGCCGGTGAACTTGAAGAATCTGGAGTGGACCCATAG
Protein Sequence: MKAANVVFLAKRICGLDLKELRLAIPHSVTHMTEMKKPTVFSCILCTKTGYSQFQELRHHMQSEHSLMKQRIMQQNAKKAPKLYPNTTREIKSERNADIPMKNKVVKSVEVIEVPPENSHDGDDDDCLEMAEVEWLDEDTGLMVNILRVVEKGQFDTEEGVNIGADGSYGSSSNNLLDHAYFENQNDEDASDSDSDSGVWIVQSGDVWLEGQDMEVPSDSDHKPIVEDQEVAQEELQSVLIAPRMHQCRDCKKRYSTAERMARHVCHFKVDIDGGHFESSNKMAGENGSHRCPFCDSTFHTKIRLQFHTRHFHLSSANADEGESSTLAAGAQSLRCSMCPQKMFESEATLYDHIHFAHPRARRHLCPEEGCGKAFHLKASLNNHIRSHAGERTHRCEVCGKQFFDRQTLGEHSVTHLKVKPFQCHICLKFLNRRSRLRMHLLTHESEPIGAMVIACGNCDMAFKDTEQAEAHLNELGQCCESTEIQNPDSPSSVQKKAVPSKDDSVTKADSVKPRSNVAVGKSKPAVLTQEGVDHSETTDSSLLDGLSEVAKKTMTAVKIDKVYRCEYCEKVYSVQDALNVHRSCHEGLKNPFICHICGATFSTYSRCTTHKTTHGYYRNNSSKSSEGSQVTTSNHDQFPVVKHFLCEVCGKSYLHWTYLQVHRRQKHSDNVHMYKCRLCGDEFPNSWGIAYHRKKAHGQTSGSAAQTTTPMPSIEKFNYSCAECGVVVKNKTQLLVHRRSCHATSNVNSKNNAKQGLYSCTECGKRYITQVGLKGHLKSHHEPDSGGRPHRCLECGKTFVHATGLTTHGRRVHMKETNFACSNCGKTFYSACDLQSHLRRHTGERPFRCDVCGHAFRTKGMRNEHLRIHTGERPYPCDLCGLAFRRSYAMKNHRLIHTGERRYRCSLCPRAFRVRADLNTHFRHKHGSETTASTEAQPPVMVVNMPNEFTKNHHEEILIDLNNMKTEHIESLEGRVDASGIIIFNEQGVESMLQNDQVLKLQKPTKAINSDENALMRGVTIETVDSFVEDNYNSEDLLPEGDSKFVKVWSDTEDSGGGQVDHVNMDGSKSPDDARRSVSWHGEGLGICCSRYECDPKTCFCCGFYDAGELEESGVDP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -