Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: L
Assembly: GCA_028554975.1
Location: JAHFWI010000034.1:511939-517697[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 2.2e-05 0.0017 19.3 0.2 1 23 10 32 10 32 0.98

2 22 0.00026 0.019 16.0 0.3 1 23 64 87 64 87 0.95

3 22 1.3 96 4.4 0.4 3 23 125 147 123 147 0.80

4 22 0.00047 0.035 15.2 0.2 1 23 169 192 169 192 0.96

5 22 0.075 5.6 8.2 0.0 3 23 204 225 202 225 0.92

6 22 0.054 4 8.7 0.0 3 23 264 284 263 284 0.98

7 22 0.084 6.3 8.1 0.0 3 23 298 318 296 318 0.87

8 22 0.00095 0.071 14.2 0.0 1 23 326 349 326 349 0.94

9 22 0.036 2.7 9.2 0.1 1 23 354 377 354 377 0.92

10 22 4.6 3.4e+02 2.6 0.1 1 23 384 410 384 410 0.82

11 22 0.002 0.15 13.2 2.6 1 23 452 474 452 475 0.96

12 22 5.5 4.1e+02 2.4 0.5 3 23 515 537 514 538 0.83

13 22 0.0038 0.28 12.3 4.6 2 23 551 572 550 572 0.96

14 22 0.019 1.4 10.1 0.1 1 23 582 604 582 604 0.96

15 22 0.14 10 7.4 2.2 2 23 612 633 612 633 0.96

16 22 6.5 4.8e+02 2.1 0.1 1 10 687 696 687 700 0.90

17 22 0.0073 0.54 11.4 0.1 2 23 735 757 735 757 0.94

18 22 0.27 20 6.5 0.0 1 23 761 783 761 783 0.96

19 22 0.09 6.7 8.0 0.1 2 23 791 812 790 812 0.95

20 22 0.0041 0.3 12.2 0.0 1 23 820 842 820 842 0.97

21 22 0.44 33 5.8 0.8 1 23 849 871 849 871 0.93

22 22 0.41 31 5.9 1.1 1 23 925 947 925 947 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	2.2e-05	0.0017	19.3	0.2	1	23	10	32	10	32	0.98
2	22	0.00026	0.019	16.0	0.3	1	23	64	87	64	87	0.95
3	22	1.3	96	4.4	0.4	3	23	125	147	123	147	0.80
4	22	0.00047	0.035	15.2	0.2	1	23	169	192	169	192	0.96
5	22	0.075	5.6	8.2	0.0	3	23	204	225	202	225	0.92
6	22	0.054	4	8.7	0.0	3	23	264	284	263	284	0.98
7	22	0.084	6.3	8.1	0.0	3	23	298	318	296	318	0.87
8	22	0.00095	0.071	14.2	0.0	1	23	326	349	326	349	0.94
9	22	0.036	2.7	9.2	0.1	1	23	354	377	354	377	0.92
10	22	4.6	3.4e+02	2.6	0.1	1	23	384	410	384	410	0.82
11	22	0.002	0.15	13.2	2.6	1	23	452	474	452	475	0.96
12	22	5.5	4.1e+02	2.4	0.5	3	23	515	537	514	538	0.83
13	22	0.0038	0.28	12.3	4.6	2	23	551	572	550	572	0.96
14	22	0.019	1.4	10.1	0.1	1	23	582	604	582	604	0.96
15	22	0.14	10	7.4	2.2	2	23	612	633	612	633	0.96
16	22	6.5	4.8e+02	2.1	0.1	1	10	687	696	687	700	0.90
17	22	0.0073	0.54	11.4	0.1	2	23	735	757	735	757	0.94
18	22	0.27	20	6.5	0.0	1	23	761	783	761	783	0.96
19	22	0.09	6.7	8.0	0.1	2	23	791	812	790	812	0.95
20	22	0.0041	0.3	12.2	0.0	1	23	820	842	820	842	0.97
21	22	0.44	33	5.8	0.8	1	23	849	871	849	871	0.93
22	22	0.41	31	5.9	1.1	1	23	925	947	925	947	0.97

Sequence Information

Coding Sequence: atgaaaacgcacgacaaccagaaaccattccaatgtacggtctgcaacCGAGGATACAATACTGCTGCCGCGCTGACGTCTCACATGCAGAATCACAAGCGGGGTACCGAGGCTGGTTCTGCAGCTGGCGTTGGGTCTGGGGCAGGGGTTGCTGTTAGGGTTTCACCATCGCCAAGAGCGACTCCGGCATTCCGTTGCCTGCAATGTGGAGATCGATTTAGAAGACCAGATTTACTTCAGAGTCATATGGCATTATCTCACGCAACCGAAACATCAACTAGCGGAAGTCCCCGCTCTGCGACCGGAGTGCCGACGCCACCGTCGCCAAGATCTCGTCTTCCACCACCCATATCTCTTACTCCAAAACTGACATGCATGTACTGTACTCGAGACACGTTTACTGCCATGGACCAACTCCAAGCTCACGTCAGAACAATGCATGCGGCTATTTCTCAACCACCTCCACAAAATGGGATGACTCCGGCACATTCACCCGCTCTCGCATTTCCATGTGAAATGTGCACAATGAGATTTCCTACGCCATCCGTCCTTCAACAACACATCACGTCGTCCCATTCAAAATATAGTCCGGGGAGCTCTCCCATAGCTTGCGCTGCCTGCAATCTCCCCTTTGCGAACCCTTCCGAATTGGCTGAGCACTTCATGATAGTCCATGGCACTCCTTCGGCCCCTGAACAAATCCGTCCCACGGACTTGAGTAAGAAGAACAATGATCGTCCTCCAAAACGCCCTCGTATTGAAGAATCTCTGGCCGCTGGAACGTTGCTTTGTAATCAATGCGGTGCCGCCCTTCCCGATTTTGAATCTTTTCGCGCTCATCTACGCGCTCATCTCGACGGGAATAGTTCCGGAGGGGTGACTCCTCTTTCGTGTATTCAATGTGGTGCACGATTCAATGATGCAGTTTCTTTAGAAAGGCACGCAGCCGCACATTTGCTCTCAGTTGGAGCGGAATTTGCGTGTCCAAGCTGTGCTAGGGCGTTTCCTAAGCCAGACGAGCTGCAGAAGCATCTTATGGATCTACATGCACATCATTTGTACCGTTGCGCCATCTGCAGGGAGGTCTTCGACTCGAAGGTTGCTATACAGGTGCACTTTGCTGTGAAGCACAGCCACGAATGCAAAGTTTACCGTTGCACTGCGTGCCCGCCCACATCTCCCGCCTTTCGAACTGAGTCTGAGTTCGCCTTGCACGTGCGCGCACAGCACGCCCAGCGCGCAAACGTGCACGCGCCACCGGCACCACCCCCGCCTCTCAGGTGCCTCTTCTGCAGGGCAGCATGTGCCTCGGATCTTGAGATGCAGTTCCATCTTGCTGCTCATGCTGATCAGTTCCGGTGTCCAATTTGTCGAGAGGGTTTCCATGTTGAGTTTTTGCTGGACCGGCATATGCAGACGCATCATTCTGGAGCTCAGACATTAAATGGAGATAGTCCTAAACCAAAGCAGGCACTTACTGGACGAGTCAGTGTGAAGACGCTGCCTTCTGAAAATAATAATACTAAAAAGGATGCAAACAACTGCGACATTTGTGACAGAAGTGATTTTCAAACTGAAAATGAGCTCGCGGCTCATAGGAAACTGGCTCATCATGTCAAAGTCGCCGGTAAAAACGGAGCTGTCAGCTTGCACTGCGCCTACTGCAGTGAAAATTGCAAATCTCGCACCGAGTTAGAAAATCACATGAAGACTCACTCTCAAGGAAGCGCCACCGGCGGGAAACATAAATGCCTCATATGCGATGAAGTTTTTCCTTCTGCGGCTATACTCGCCGAACACAAGTTGACACACTGCAAAGTCCTCACTGGTAACACTTGCACTCACTGCAAGGCGACGTTGACGAGTGAGGAACAATTTTTCGCTCACCTCACTCAACATTCAAACAATAATAATAATTCTCCGGGGAGTCCCCATTCCAGTGCACCATTGGCGCTTCCAGCACCGTGTGTCGTTTGTCGTCAGACTCTTATTTCAGACGTAGAAGCAAGAATACACGCAAGATTTCACTTGAAGAATTCAGGATCAGCCTTGGATGGGTACCAATGCGCATTATGTTTGAAATCTTTTGATATTAAAGATGTCATTCCTACAGGAGGCGAGAGAAACAACGGAATCCCAACAACACACGTGTGTCGTGAATGCTACCGTCACCACACAGGCAATTCGCAGTTAACGGAACGGCGATGCGCCGAATGTCATCTCAAGTTTGAATCTGCAGGGGCTTTGGAGAGTCATATCGAATTAGCGCATAGGAAAACTTACACCTGTATTGAATGTCAGGCAGCATTTGAAACAGAACAAGAAGTGAGAGCTCACGTTAGAGCTCACGTAGCAGGAGGCGGCACTCTTGAATGCAGATTATGCCGTAGATCTCTCGGATCTCCGATGCAACTTCAGGCTCATCTGATCGAGCATACGTTTGCGGGTTGCGGAGGATTCACTTGTTATTTATGTTCCGCTGTGTTCACCGGCGCTCCGGCATTGCAACAGCATATGCTGGCACACGGTCTCGCCGCCCGTCCTTACGATTGCGTCCGCTGCGGCTTGAAGTTCTTTTTCCGTGCCGAACTTGATAACCATAGCTATTCTCACCTTGAAGATGATGTCAGGAGTAAATTGAGCGATTCGGAAGCACTGACTCATCCATATTTTATGAATCAAAATGGATTTCATAACGTAGACGCGGCGACGTTTTACGCGACATCTCCACCGAGTTCTAAAAAGTTGAAAGTGTCAAAAAGTCCAAGTATTTTTAAATGCGCTGAGTGTCCAGCTGAATTCGGGAATATATTGGGCTTTCACGCCCATAGGAGGCACCACTGTATCGGAAAGGAAGAGTCTCCGGCTGAAGACAATTCCATAAAGAGAGAAGATGTTGTAGTTAAACAAGAACTAGACGACAGAGGAGATGAATACATAGAAGTTAGTTCTCCTTTGAACGTTTCAAAGAATCCTGAAACTTTAACTGAGGATCTGCACGTTAAAGAATCAAAAAGCGATGCTCCCCTACTTAGTCCTAAGCGAGAAGTTATTGAAAACTGA
Protein Sequence: MKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKRGTEAGSAAGVGSGAGVAVRVSPSPRATPAFRCLQCGDRFRRPDLLQSHMALSHATETSTSGSPRSATGVPTPPSPRSRLPPPISLTPKLTCMYCTRDTFTAMDQLQAHVRTMHAAISQPPPQNGMTPAHSPALAFPCEMCTMRFPTPSVLQQHITSSHSKYSPGSSPIACAACNLPFANPSELAEHFMIVHGTPSAPEQIRPTDLSKKNNDRPPKRPRIEESLAAGTLLCNQCGAALPDFESFRAHLRAHLDGNSSGGVTPLSCIQCGARFNDAVSLERHAAAHLLSVGAEFACPSCARAFPKPDELQKHLMDLHAHHLYRCAICREVFDSKVAIQVHFAVKHSHECKVYRCTACPPTSPAFRTESEFALHVRAQHAQRANVHAPPAPPPPLRCLFCRAACASDLEMQFHLAAHADQFRCPICREGFHVEFLLDRHMQTHHSGAQTLNGDSPKPKQALTGRVSVKTLPSENNNTKKDANNCDICDRSDFQTENELAAHRKLAHHVKVAGKNGAVSLHCAYCSENCKSRTELENHMKTHSQGSATGGKHKCLICDEVFPSAAILAEHKLTHCKVLTGNTCTHCKATLTSEEQFFAHLTQHSNNNNNSPGSPHSSAPLALPAPCVVCRQTLISDVEARIHARFHLKNSGSALDGYQCALCLKSFDIKDVIPTGGERNNGIPTTHVCRECYRHHTGNSQLTERRCAECHLKFESAGALESHIELAHRKTYTCIECQAAFETEQEVRAHVRAHVAGGGTLECRLCRRSLGSPMQLQAHLIEHTFAGCGGFTCYLCSAVFTGAPALQQHMLAHGLAARPYDCVRCGLKFFFRAELDNHSYSHLEDDVRSKLSDSEALTHPYFMNQNGFHNVDAATFYATSPPSSKKLKVSKSPSIFKCAECPAEFGNILGFHAHRRHHCIGKEESPAEDNSIKREDVVVKQELDDRGDEYIEVSSPLNVSKNPETLTEDLHVKESKSDAPLLSPKREVIEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00799464; iTF_00800361;
90% Identity: iTF_00799464;
80% Identity: -