Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: -
Assembly: GCA_028554975.1
Location: JAHFWI010000031.1:1437591-1453338[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.043 3.2 9.0 0.5 1 23 409 431 409 431 0.97

2 20 0.2 15 6.9 2.1 1 23 438 460 438 460 0.87

3 20 0.73 55 5.1 2.9 2 23 465 486 464 486 0.96

4 20 2e-05 0.0015 19.5 1.0 1 23 493 515 493 515 0.98

5 20 0.00015 0.011 16.7 1.5 1 23 522 545 522 545 0.96

6 20 0.001 0.077 14.1 0.1 1 23 551 573 551 573 0.96

7 20 0.00061 0.046 14.8 2.1 1 21 579 599 579 604 0.93

8 20 0.0053 0.4 11.9 1.2 1 20 612 631 612 632 0.96

9 20 0.0042 0.31 12.2 0.5 3 23 643 664 641 664 0.94

10 20 0.64 48 5.3 0.2 2 13 674 685 673 687 0.85

11 20 0.022 1.6 9.9 0.3 1 23 1062 1084 1062 1084 0.99

12 20 0.32 24 6.2 2.2 1 23 1091 1113 1091 1113 0.93

13 20 0.38 29 6.0 2.7 2 23 1118 1139 1117 1139 0.96

14 20 0.012 0.86 10.8 4.2 1 23 1179 1202 1179 1202 0.95

15 20 0.00073 0.054 14.6 0.2 1 23 1208 1230 1208 1230 0.96

16 20 8.1e-06 0.0006 20.7 0.4 1 21 1236 1256 1236 1261 0.93

17 20 0.0076 0.56 11.4 0.3 1 20 1269 1288 1269 1289 0.95

18 20 0.026 1.9 9.7 2.2 2 23 1299 1321 1298 1321 0.95

19 20 3.7e-05 0.0027 18.7 1.7 1 23 1330 1352 1330 1352 0.97

20 20 4.9e-05 0.0037 18.3 0.4 1 23 1358 1381 1358 1381 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.043	3.2	9.0	0.5	1	23	409	431	409	431	0.97
2	20	0.2	15	6.9	2.1	1	23	438	460	438	460	0.87
3	20	0.73	55	5.1	2.9	2	23	465	486	464	486	0.96
4	20	2e-05	0.0015	19.5	1.0	1	23	493	515	493	515	0.98
5	20	0.00015	0.011	16.7	1.5	1	23	522	545	522	545	0.96
6	20	0.001	0.077	14.1	0.1	1	23	551	573	551	573	0.96
7	20	0.00061	0.046	14.8	2.1	1	21	579	599	579	604	0.93
8	20	0.0053	0.4	11.9	1.2	1	20	612	631	612	632	0.96
9	20	0.0042	0.31	12.2	0.5	3	23	643	664	641	664	0.94
10	20	0.64	48	5.3	0.2	2	13	674	685	673	687	0.85
11	20	0.022	1.6	9.9	0.3	1	23	1062	1084	1062	1084	0.99
12	20	0.32	24	6.2	2.2	1	23	1091	1113	1091	1113	0.93
13	20	0.38	29	6.0	2.7	2	23	1118	1139	1117	1139	0.96
14	20	0.012	0.86	10.8	4.2	1	23	1179	1202	1179	1202	0.95
15	20	0.00073	0.054	14.6	0.2	1	23	1208	1230	1208	1230	0.96
16	20	8.1e-06	0.0006	20.7	0.4	1	21	1236	1256	1236	1261	0.93
17	20	0.0076	0.56	11.4	0.3	1	20	1269	1288	1269	1289	0.95
18	20	0.026	1.9	9.7	2.2	2	23	1299	1321	1298	1321	0.95
19	20	3.7e-05	0.0027	18.7	1.7	1	23	1330	1352	1330	1352	0.97
20	20	4.9e-05	0.0037	18.3	0.4	1	23	1358	1381	1358	1381	0.92

Sequence Information

Coding Sequence: ATGGAGTCAGACGAAAATAAGAGAAATTTAACATTCGAATTTAGGTACAACGTATGCAGAGGATGTCTAATTGTATCACCAGTCGCATTCTCGCCTATCGATGACAGGATTTTGAATTCTTTTACAGAATTATCGGGAATAAATGTTTCTAATGGAAGTAGTTTACCTCACAGGCTTTGCAGTAACTGTTTGCGGTTGATCAAGCAATCAAATCGATTCAAAAACACCTGCCTCAACTCCAATAGGATTTTAACCGAATTATTACAGTCGAGTCTGACTTGCACTGGTCAGTTTGATCTGAATGACCTACGTAAAGAAAGGAAAAAATTCATAGACTTAACTAATCCATTGACTCTATCAAAAACGATGACGATCGAATGCCAAGAGACCAATTCAGAACAACCCAATACCTTCACCAATGTAATCAAAAGTCCTATTCAAACCCCTCCGGATCCATTCGCAGGATTCGATCTCAGAGACGATGTCCCCTTAAATATGATCGGTCAAACCGAAGGCAAGATCCTCGAAAGTAGTTTCATAGCGAATTATGACGGATTGAAATTCTTCAATAACGTAAATAATTCATGCCCTGAAAGTATATTTGATGAGGTGTCTAATAAATTTTTCGTCGTAGATACGGAAGCTTTAGAATATAATTCAAATAAATTAAAAAATCCTTCAAATTCAAACAGTAAAAATATTTGGAAAGGAGCTACAACTGTTAAGAATGAATTCAATAATTTGCTGTATATAGAAGTGTCTAAAGGAGATGATGACGATGAGGATGATGGAAATTTTGATGATTTCGATGCGAGATCTATGTCGCCCAGTATCAAAGAAGAATTATTGGATGTTCCGAAGAAGGTAACACTAAAAACAAAAAAGAAATCAAAGAAGAAAAAGATTTCAAAGAACTCTGACTCAGACGAAGAATTCACTCTTGAACCGTCGTCGTTCAAACGGAAAAGAAATGCCGTTATGCGCTTTGAAATCCTAGAAAAGACAAGCAGTAAATCGAGCAGTCTATCGAAATTAAAAAAGCAAAAGATCAAAACGAAAAAACACGCCGAGGTCAAGAAAGACCCCACCGAAGTAGCCAGAAAGAGGAGCCAGCAGATATATCATTTTGACGAGGAGAGTGTCAGTGTTCAGAAGCTAACTGTCGAGGAGCAGTTCCAGGATCTGGCTGAAGCTAGGAAAACTAAGCAATATATGGATGCTCCTTTCAAGTGCGAGGATTGCGCCAAGTACTTCTCTTACGAGCTGACGTGGCAGGGCCATATGGTCAGGCACGAAGAGTCTGCTGGGCAATACTTGTGCAAGATTTGCAAGCAGCGTTACTCTACCCCGAGAAGTCTGCAGTGTCATTCGGCTATTCACGATGAACGTCTCCAATGTAAACACTGTATGAAAATTCTTAGCGGGCGTTCGCACATGGCGAAGCACGTCGCCAAACACAAAGGTCTCTCGCAGACATTCGAATGTGATATCTGCGGCAGCACTAGCACTTCTAAGAGTAATTATAAACGGCACATGACAATTCACACCTCTGAGCCAAAGAAACACAAGTGTCCGTATTGCCCGAGGGCTTTTAACCACTCTGCCAACAGAAACGACCACATCATACGTGCGCACACAGGTCAGAAGCAGTTTGCGTGTGAGGTCTGCAACGTAGCCTTCGTGAATAAGACTGCCCTCAAAGCCCATTCCATCAAGCACTCGGAGAGGAAGGACTTCTACTGTGTGGAGTGCGACAAGAGTTATAAGACACGATTTTCGCTCGCCCATCATCTAAATGTTTCATCCAAACACGGCAACCCTGCATACCTAAAATTCCACTGCACACAATGCGATAAGCGGTACGATACGGCGCGTAAACTGAAACTTCACATCGACTGTACGCATCTGCACATCTTCAAGTGGGCCTGCGAGAAGTGCTCCGCCAGGTTCCGGTCCCCGGGCGGACTGAGACACCACAGAGACCGAGTGCACGAAGGAAAGGTCAGCCTCAAAAATCAAATGTGCGATACGTGTGGAAGATCCTTCTCTGTATCTAGAGACAATGGACTGCCCCATCGATTATGTGTTGACTGTTCCAGAGCCATCAAACAAACTATTAAGTTTAAAAATAAATGTCTTCACTCTAGCAGAATTCTGACAGAATTATTGGAAAACTCTGTAACTTACGGCGGCCAGCTCGATTTGAATGATGTGCGCAAAGAAAGAAGAAAAATTCTCAATGACAATCAGCTGATGCTATCGAAGACTCTAACTGTCGAATGCCTCGAAAAAAGCTCGCGAAGCCCAATAGAACAACCCAAGACATACACCAACGTAATAAAGAGCACCGATAATAATTTCCCAGACCCCTTCGGAGACCTCGACCTCAAGGAAGATGAGCCTCTTAGCCTTATCGGCCAAAGGGGGAAGAGTATCGCGAAGAATTTCACCGCTGGCAATTACGACAGCGGGTGGTTCTACGACCAGTTGAACAACGCGTGTCCGGAGGATATCTTCAGAGGCACTTCGAATAAGTTATTCGTGATTGATTCTCTCATTTTAGATGATGAACTCCCGAAAACGGACAGCTCTACTATTGTTGATGATTCCGACCCGTGGAAAGGTGAAACGTCTGTCAAGAAAGAAGTCAACAATTCATTATACGTTGAAGTATCGAAACCTGACGATGATGATATAGAGTTCAACGATGACAATGATGACGATGACGACTTTGATCCTGGATCGCTTTCGCCGAGTGTAAAAGAAGAATATTCCGACGATGACAATAAAGAAACTTTGAAAGTTAAAAAAAAAAAAAAGAGAAAATCGAAAAGGAATGCAGGCGCGGACGATTCTGAATATGACGACGCCGAAGATGAACTGGACTTGAGCGTCATCAAGAAACAATCAAACTCCTCATCAGTCAAAAGAAAACGGAGCGGCGTGAGCCAGTACGACCCATCTGCGAAAGTCAAGAGCGAGCTGAAGCTGGAGAAGAAGAAAAATAAATCGAAAAAAGATCCCAATAAAAAAAAAGACCCGCCGAAAAGGATCGTGGAGAAAACCGGCCTGCAGATATATCACTTTGACGAGACGTGCGTTAACGTGCTGAAGTTGACGACAGCGCAGCAGATACAGGACCTCGAGGAAGCCAAAAAGACGAAGCAATATGCAGACGCGCCCTACAAGTGCTCTCTCTGCGCCAAATGGTTTACTTATGAAGTCAGTTGGCAAGCCCACATGCTAAGACATGAAGAATCTGCCGGAAAATACCTGTGCCTGATTTGCCAGCAGCGATACACTACGCCGCGCAGTCTCCGATGTCACACCCTAATCCACCAGGAGAGGCTGGAGTGCAAGCAGTGTCTGAAGGTTCTGTGTGGCCGCTCGCACATGGCCAAGCACGTGGCCAAACACAAAGGAATCACGCAGACATTTGAATGCGACGTTTGCGGCAGCAGCAGCACGTACGATGACTTATCTAAGAGCAATCACAAGCGGCACATGAGAATGCATACGTCGGAGCCGAAAAGATTCAAATGTCCCTACTGTCCAAAGGTCTACACTCACTGCACCACCAGAAATGATCACACTGCtcgcgctcacaccggccagaagaacttctcctgcgaggtctgcagcatggcctttgtcaacaaaacagctctgaaggctcactccatcagacactcggagaaaaaggaattctactgtgtggagtgcgacaagagcttCAAAACAAGATCCTCCCTCGCCGCCCATTTGAATGTTTCCGTGAAACACGCCAACCCTACCTTCCTCAAATTCCAATGCGACCAATGTGACAAACGCTATGAGACTGCCCGACGACTTAAGCTGCACGTGGAATGCGTCCACCTCCATCTATTCAAGTGGACTTGTGAGAAATGCTCCGCCAGATTTCAGACCCGAGGCGGGCTGAAGCATCACAGGGAGAGAACCCACGAAGGAAAAATTATGGCCAAGACACACATGTGTGAAACGTGTGGAAGAGGATTTGCATATAAAACTACCCTCAAAAAccacatccttacgcacaccggcgaacagccccacgtctgcgacatatgcgacCGCCCCTTCCGACAGAAGACGGCCCTCAAGACCCACGTGGAGCTGGTGCACCTCAAGTTAAAAAAACCGTACAAGAACAAAAAGAACCGCAATCCCGACATGCAGATGCCGCCGCCGCCCATCATCAACGAGAGGCAGTCCCTGTCCATGGACAACAACGTCATTCCGCCGATCGTCGACTACCATCCGATGAACCACAAGCCCTCGTTAGGAATCATCGAAACGTTCTACCGGCGATAA
Protein Sequence: MESDENKRNLTFEFRYNVCRGCLIVSPVAFSPIDDRILNSFTELSGINVSNGSSLPHRLCSNCLRLIKQSNRFKNTCLNSNRILTELLQSSLTCTGQFDLNDLRKERKKFIDLTNPLTLSKTMTIECQETNSEQPNTFTNVIKSPIQTPPDPFAGFDLRDDVPLNMIGQTEGKILESSFIANYDGLKFFNNVNNSCPESIFDEVSNKFFVVDTEALEYNSNKLKNPSNSNSKNIWKGATTVKNEFNNLLYIEVSKGDDDDEDDGNFDDFDARSMSPSIKEELLDVPKKVTLKTKKKSKKKKISKNSDSDEEFTLEPSSFKRKRNAVMRFEILEKTSSKSSSLSKLKKQKIKTKKHAEVKKDPTEVARKRSQQIYHFDEESVSVQKLTVEEQFQDLAEARKTKQYMDAPFKCEDCAKYFSYELTWQGHMVRHEESAGQYLCKICKQRYSTPRSLQCHSAIHDERLQCKHCMKILSGRSHMAKHVAKHKGLSQTFECDICGSTSTSKSNYKRHMTIHTSEPKKHKCPYCPRAFNHSANRNDHIIRAHTGQKQFACEVCNVAFVNKTALKAHSIKHSERKDFYCVECDKSYKTRFSLAHHLNVSSKHGNPAYLKFHCTQCDKRYDTARKLKLHIDCTHLHIFKWACEKCSARFRSPGGLRHHRDRVHEGKVSLKNQMCDTCGRSFSVSRDNGLPHRLCVDCSRAIKQTIKFKNKCLHSSRILTELLENSVTYGGQLDLNDVRKERRKILNDNQLMLSKTLTVECLEKSSRSPIEQPKTYTNVIKSTDNNFPDPFGDLDLKEDEPLSLIGQRGKSIAKNFTAGNYDSGWFYDQLNNACPEDIFRGTSNKLFVIDSLILDDELPKTDSSTIVDDSDPWKGETSVKKEVNNSLYVEVSKPDDDDIEFNDDNDDDDDFDPGSLSPSVKEEYSDDDNKETLKVKKKKKRKSKRNAGADDSEYDDAEDELDLSVIKKQSNSSSVKRKRSGVSQYDPSAKVKSELKLEKKKNKSKKDPNKKKDPPKRIVEKTGLQIYHFDETCVNVLKLTTAQQIQDLEEAKKTKQYADAPYKCSLCAKWFTYEVSWQAHMLRHEESAGKYLCLICQQRYTTPRSLRCHTLIHQERLECKQCLKVLCGRSHMAKHVAKHKGITQTFECDVCGSSSTYDDLSKSNHKRHMRMHTSEPKRFKCPYCPKVYTHCTTRNDHTARAHTGQKNFSCEVCSMAFVNKTALKAHSIRHSEKKEFYCVECDKSFKTRSSLAAHLNVSVKHANPTFLKFQCDQCDKRYETARRLKLHVECVHLHLFKWTCEKCSARFQTRGGLKHHRERTHEGKIMAKTHMCETCGRGFAYKTTLKNHILTHTGEQPHVCDICDRPFRQKTALKTHVELVHLKLKKPYKNKKNRNPDMQMPPPPIINERQSLSMDNNVIPPIVDYHPMNHKPSLGIIETFYRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -