Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: -
Assembly: GCA_028554975.1
Location: JAHFWI010000046.1:2407596-2420896[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00088 0.066 14.3 0.1 1 23 494 516 494 516 0.96

2 12 0.00012 0.0093 17.0 1.5 1 23 524 546 524 547 0.96

3 12 0.0074 0.55 11.4 1.5 1 23 553 575 553 575 0.96

4 12 7.8e-06 0.00058 20.8 1.8 1 23 581 603 581 603 0.98

5 12 1.4e-05 0.001 20.0 2.1 1 23 610 632 610 632 0.99

6 12 4.4e-05 0.0033 18.4 0.4 1 23 638 660 638 660 0.92

7 12 3.3e-05 0.0025 18.8 0.2 1 23 666 688 666 688 0.99

8 12 5e-06 0.00037 21.4 0.8 1 23 694 717 694 717 0.96

9 12 0.00028 0.021 15.9 1.7 1 23 723 746 723 746 0.96

10 12 1.7e-05 0.0013 19.7 2.0 1 23 752 774 752 774 0.99

11 12 2.4e-05 0.0018 19.2 0.5 1 23 780 802 780 802 0.97

12 12 0.0041 0.31 12.2 0.1 1 21 808 828 808 832 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00088	0.066	14.3	0.1	1	23	494	516	494	516	0.96
2	12	0.00012	0.0093	17.0	1.5	1	23	524	546	524	547	0.96
3	12	0.0074	0.55	11.4	1.5	1	23	553	575	553	575	0.96
4	12	7.8e-06	0.00058	20.8	1.8	1	23	581	603	581	603	0.98
5	12	1.4e-05	0.001	20.0	2.1	1	23	610	632	610	632	0.99
6	12	4.4e-05	0.0033	18.4	0.4	1	23	638	660	638	660	0.92
7	12	3.3e-05	0.0025	18.8	0.2	1	23	666	688	666	688	0.99
8	12	5e-06	0.00037	21.4	0.8	1	23	694	717	694	717	0.96
9	12	0.00028	0.021	15.9	1.7	1	23	723	746	723	746	0.96
10	12	1.7e-05	0.0013	19.7	2.0	1	23	752	774	752	774	0.99
11	12	2.4e-05	0.0018	19.2	0.5	1	23	780	802	780	802	0.97
12	12	0.0041	0.31	12.2	0.1	1	21	808	828	808	832	0.92

Sequence Information

Coding Sequence: ATGTCTGAATCAGATCCTAAAAATAATCCTCACTGCTTTATATGTAGCAGTCGAGCAGGTGTATCCATTAGAAATGCTGTGCAAATATTTAATAGTATTAATAAACTGCCGGCTTCAGAAAAATCATTAGCAGCCGTGATCAGTGATGTTGTCGGAAAACATATCAATAAGCAGACAGTGCACTCTTTTATTATTTGTAAAAAGTGCTACAAACTTTTTCAAGAGTATGACGAGGTGGAATATAGACTTAATGAAATTAAAATGGAGCTTATATCACAGTTCCGAAAAACGTTGCCAAAATACAACTTAGATTACGACATTTATACGGGGGCCACCGCCAAGATCAAGGTGGAACCTTTTCAGGAAAATGAGCCGAAAAATATAATCCCCGCAGAGATACCAACTATCACTAATGAGGTTTCCAATTTAAAAGTGAATGTGCTGCCAGCCATTAGAAAAATTTCCCCCATGCCCCCCAGTGTTGTTATTGTTCATAAAGGAAAAAAAATTGCCATACAAAAGACAACAAAGCCTCCTGTTATTGTGAAGATCAATCCAAAAGTTATAGAAAACACCACTCTGCAAGAAATTCCTTCTTCGTCTAAAAAAGATTCCACGTTAATTGAAAATGACAGATCTCCGAATAATCGAATCCCACCCACACAGCCGGACTTTGAAGAACTTATTCCTTCCAATATTACAGAAATTCATAAAGAAGAATCTCCTCAACATGATGACACTGACACTAATACTGAACTTAACTTTACTTCCAATGGTGAAGATTTGGATAAAAACGATGAAGTATCTGATAATACAGATGTCATTGGAAAGTATGTAATTAATCAGATGGGAGAAATAGAAGAGACCGAGTCGGAAGGTATCCAAATTCAAGAAGGGACATTTTTGATGGAGCAAGACGAAGACGGAAGTATTATTAGAGTTGTTCACCATCCTGGAGATTTGATACAGGATGAGGATGGCAATATCATTTACAGTACAGAACAAGAGATGGAAATGGTTTTGCCTTCACAAGATGAGGATTGTGATGATGAGGAGGATTGTGAAAATGATGAATATGAAGAAGTGGAACCAGGTCACAAAGAATTTATCAAATTGGTTCCTAATTCTGTTCTTGGAAAAATTCTCTACAAGACAAAGAAAGATGATAGACTCGAAGGCGATGAAAAACAGTCATCAGGGGATGAGACGGACTTAAAGACAAAAGCATATCTTGATAACCCACAAGCTGTTGTAAAAATGGTTGGAGATCTCTACGAGTGTTTACTATGTGATACGAAAAAAGAAAAATATAAATCAATTAAAGATGAGGATGATTCAACCACCTCTAATGCAAACGGAAACAAGTCTGGTGACGAAAAAGGCTTGGATGAAAGTGAAGAAATGTCAGCATCGCAACCTTTCCTCGGAGATTCAAAATTAATAGTTCAACACATGAAATCAGACCATGATGAAAAAATATATGTTTGCGATATTTGTGGCGACGTATTCAAGAGAAAGCTAGAGCTGTCACAACATCTGGacgagcatgtcatggctgtccagggagatttcaaatgcgatgtctgcgagaaagaatttgacagcgttcgactgctgagaatACACAGAAGAGTTCACCATATGCAACACAAACAACACACCTGTCTTGTCTGCAGTAAGAAATTTGGATCCAAAAACTTGCTAGAAGAGCATAACAATATCCACATAGGAGTACGGCCGTATAATTGTGAGCTCTGCGGGAAGAATTTTGCCTCCAAATATACTTATCAATCACATTTGAAAACTCATATGGATAGGCCACGCCCCTACACGTGTGCCAAATGTGGGAAGTCATTCTTCACAATGCAGAATCTTACGCAGCATGAAAAAACACATCTTGGCATCAAGGACCACATCTGTAACGTATGCGGTAAAGCTTTCGGTACTCAGCATAATTTAGAAGTACACGGTGTAGTCCACACAGGATACAAACCTTATGTTTGCAGGACTTGCGGAAAAGCATTTGCTCGGCGAGCTGAAATTAGAGATCACGAAAGAACACACACAGGTGAACGTCCATATGTTTGTGATTTGTGCGGTTCTACCTTTTCGCAGCGAAGTAACTTGCAGTCACATAAGCGTGCGACGCACTACGATGATAAACGGTATAAATGCCGTGCCTGTGAAAAAAGCTTTAAGCGACGAAGACTCTTAGAATatcacataaaagcatctcatactggagagaggccatatagatgcagcgtatgcgaggctacttttgtgtatccggaacatttcaagaaacatcagcggatacatagtggtgaaaaaccatacacgtgcgaggtgtgtggaaaagcgttcaattcccgcgacaatagaaacgctcatagatttgttcattccgataagaaaccttacgagtgtcttgattgcggagctggtttcatgaggaaaccacttctgtatgcgcacatgcaCGCACAGGGGCATTTGAGTGATACAATAGTCGTTAATCAGCCAAGGCTAGGTGCAGAAAATGTGGATCCTTCAAAATACTCCTCCATTGGTGGCACTTTTATTTTAGAGGATGGGCAAGAGGTTATTATCAGAAATATAAAGGAAGAAGCAAACTGCGAAAATATGGTTCAAGAAATTTCTGAACTAGGAACTTCATCTCAACAATCCCACGAAGGTATTTACACTCTACGTAATGACAGACATAGGGGGCAGCGATCAGCGCTGATTTCAATTACTAAAGCCTATAGAACCACAAGCACTGACGCCCTGCCGGTGATGGCGGGCATCCTACCGCTTGATCTGCACATACAGGTGCGGGGTGCGACGACCCACTTTTTGGCGGGGAGGCCCGCGAAGATCGGAGACGTCACAGTTTCACCTCCCCCGGGACTGGCCAATATGGCGCAGCAGTCGCCTGGCCGCCGCTCGCGGTCATGCGATGGATACGGCACTTCGCATCTGGCAAAAGCGCTGGGATGCCTCCCTGAAGGGGCGGCAGGTTTATAA
Protein Sequence: MSESDPKNNPHCFICSSRAGVSIRNAVQIFNSINKLPASEKSLAAVISDVVGKHINKQTVHSFIICKKCYKLFQEYDEVEYRLNEIKMELISQFRKTLPKYNLDYDIYTGATAKIKVEPFQENEPKNIIPAEIPTITNEVSNLKVNVLPAIRKISPMPPSVVIVHKGKKIAIQKTTKPPVIVKINPKVIENTTLQEIPSSSKKDSTLIENDRSPNNRIPPTQPDFEELIPSNITEIHKEESPQHDDTDTNTELNFTSNGEDLDKNDEVSDNTDVIGKYVINQMGEIEETESEGIQIQEGTFLMEQDEDGSIIRVVHHPGDLIQDEDGNIIYSTEQEMEMVLPSQDEDCDDEEDCENDEYEEVEPGHKEFIKLVPNSVLGKILYKTKKDDRLEGDEKQSSGDETDLKTKAYLDNPQAVVKMVGDLYECLLCDTKKEKYKSIKDEDDSTTSNANGNKSGDEKGLDESEEMSASQPFLGDSKLIVQHMKSDHDEKIYVCDICGDVFKRKLELSQHLDEHVMAVQGDFKCDVCEKEFDSVRLLRIHRRVHHMQHKQHTCLVCSKKFGSKNLLEEHNNIHIGVRPYNCELCGKNFASKYTYQSHLKTHMDRPRPYTCAKCGKSFFTMQNLTQHEKTHLGIKDHICNVCGKAFGTQHNLEVHGVVHTGYKPYVCRTCGKAFARRAEIRDHERTHTGERPYVCDLCGSTFSQRSNLQSHKRATHYDDKRYKCRACEKSFKRRRLLEYHIKASHTGERPYRCSVCEATFVYPEHFKKHQRIHSGEKPYTCEVCGKAFNSRDNRNAHRFVHSDKKPYECLDCGAGFMRKPLLYAHMHAQGHLSDTIVVNQPRLGAENVDPSKYSSIGGTFILEDGQEVIIRNIKEEANCENMVQEISELGTSSQQSHEGIYTLRNDRHRGQRSALISITKAYRTTSTDALPVMAGILPLDLHIQVRGATTHFLAGRPAKIGDVTVSPPPGLANMAQQSPGRRSRSCDGYGTSHLAKALGCLPEGAAGL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00799469;
90% Identity: iTF_00799469;
80% Identity: -