Basic Information

Insect: Himalopsyche kuldschensis
Gene Symbol: -
Assembly: GCA_028554975.1
Location: JAHFWI010000041.1:1401427-1416757[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.7 5.8e+02 1.9 4.2 1 23 273 295 273 295 0.93

2 17 0.01 0.76 11.0 0.1 2 23 305 327 304 327 0.94

3 17 0.18 13 7.1 0.3 1 23 333 355 333 355 0.92

4 17 0.0015 0.11 13.6 0.2 2 23 423 445 422 445 0.94

5 17 2.1e-05 0.0016 19.4 1.3 1 23 511 533 511 533 0.97

6 17 0.016 1.2 10.3 1.7 1 23 539 564 539 564 0.95

7 17 6.5e-06 0.00049 21.0 4.6 2 23 571 592 571 592 0.98

8 17 3.7e-05 0.0028 18.6 7.5 1 23 598 620 598 620 0.98

9 17 0.014 1 10.5 0.7 1 23 627 649 627 649 0.95

10 17 0.0024 0.18 13.0 0.3 2 23 655 676 654 676 0.97

11 17 8.5e-06 0.00063 20.7 1.2 1 23 682 705 682 705 0.94

12 17 1.8 1.3e+02 3.9 0.1 3 23 721 741 719 741 0.87

13 17 1.4e-05 0.001 20.0 1.4 1 23 745 767 745 767 0.96

14 17 0.11 8.1 7.7 1.3 1 20 774 793 774 795 0.93

15 17 2e-06 0.00015 22.6 1.2 2 23 804 825 803 825 0.97

16 17 3.7e-07 2.7e-05 25.0 0.1 1 23 831 853 831 853 0.98

17 17 0.0022 0.16 13.1 2.2 1 23 859 881 859 881 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.7	5.8e+02	1.9	4.2	1	23	273	295	273	295	0.93
2	17	0.01	0.76	11.0	0.1	2	23	305	327	304	327	0.94
3	17	0.18	13	7.1	0.3	1	23	333	355	333	355	0.92
4	17	0.0015	0.11	13.6	0.2	2	23	423	445	422	445	0.94
5	17	2.1e-05	0.0016	19.4	1.3	1	23	511	533	511	533	0.97
6	17	0.016	1.2	10.3	1.7	1	23	539	564	539	564	0.95
7	17	6.5e-06	0.00049	21.0	4.6	2	23	571	592	571	592	0.98
8	17	3.7e-05	0.0028	18.6	7.5	1	23	598	620	598	620	0.98
9	17	0.014	1	10.5	0.7	1	23	627	649	627	649	0.95
10	17	0.0024	0.18	13.0	0.3	2	23	655	676	654	676	0.97
11	17	8.5e-06	0.00063	20.7	1.2	1	23	682	705	682	705	0.94
12	17	1.8	1.3e+02	3.9	0.1	3	23	721	741	719	741	0.87
13	17	1.4e-05	0.001	20.0	1.4	1	23	745	767	745	767	0.96
14	17	0.11	8.1	7.7	1.3	1	20	774	793	774	795	0.93
15	17	2e-06	0.00015	22.6	1.2	2	23	804	825	803	825	0.97
16	17	3.7e-07	2.7e-05	25.0	0.1	1	23	831	853	831	853	0.98
17	17	0.0022	0.16	13.1	2.2	1	23	859	881	859	881	0.98

Sequence Information

Coding Sequence: ATGGAACCTGATCTGTTGTCAACAAATTATGACCGCCTTAAAACTAATACTCTACCAACCAAAGCTGTCCCGACAGACTCTGATTTAGATGAGGTCTGCTTTCCTGGCAACAATATGGAGTCCAGGAGCAAAAGTAGGGACATAAAAAATGAAGTTCAAGAAAAAATGGAAAGACTGTGTCGGACGTGCCTCGTGGAAGGTGGATCCGAAGTCATGAAAGGTCTTTTCTCAATGGGCGATCCTCCAACAAATCGGGAATACCAAGATATGGTAACATCATGCACAGGAATAACGATAGAAGAAGATGACGGCTTACCTCGTCAGCTGTGCATCATGTGTGCAAATGAAGTCTCCAGTCTGTTCACCTTCAAAAAAAAGTGCGCGAAAGTTGATGTATGCCTCCGTAAACTATTACGCAATCCTAACGAGAAGGGCTTGGAAGACTTGGTTGAGCTATCGCGCCTCGGGGACATTGAGAAAGATTTATTTTTTGTCAATACGGAAGATTCTGACACGTCCAAGAATTACTGCAAGAAAAAAAGAGCAATGAGCAGTCCAGAAAACACCAAAATATCTCCAGACACTCTCGACTATAGCGTGGACTCTTCGGTTGCGAAGACTGCCTCCGATTCGGTATCTCCGCTAAAAAGCAATTTGAACAGATTTGACGGTTATGAGAATACCGATGACGAAGAAATGAATATGCCAATCTCAAATTACGACCCTCTGACATTGTTGACAAGTAAGAAGGACGGTAAAAGAAAAATTTCATCTGATATTTTGGAGAGGGACAAAAATGTAGCAACCGTAGTAGCCTTTGCTTGCCGCAAATGCGACATGCACTTCCTGAGCTTCGAGGAACTCTGCAAGCATAGTGTTATGCATCCTCAGATAACCGATGACCTCAAACTGGTCTGCCGGTACTGCGATGAGACCTTCAGCTATCAGAGGCTGGTCATCCCTCACATCAGATCGGCACATGCGGATTTGGCGAGATTCCAGTGTGGCTACTGCGGTGAAAAGTGGAAAGTATTCACAGAACTGAAAGAGCATTTAGTCAATCATTCATCGGGCGACACTTTTTACAAAATGGCCGATAGACGAGTCAAAGAAGAGATGTGTAGCGACGATGATGATGACGATGACTACACGTTGGATACCTTTGTTAGCTGTGCCCAATCCAACCAATCCGAGTCTGAGAATTCAAGTCCTCTTAAAAAATTGAAGGCTTCAAGCAGTAGACACGTTAAAAAATCTGACAAACTTAGATGTAATATTTGCAAAAAGTTCTTCGGTGGGCGGGAAACTTTAGAGGCTCACCTCTTGCAAGAACACGGATTAGAAAATATGAACCTAGAAATACATAGTGTAAAACTAATCTTGGACAACTCTGCAGTGAAATTGGAAAATAACGGCAATCTGGATGAACATAATGGAGTGTTATCAAAAGCTAAACCAGTCAAAAAAGCTATTAAAACTATAGGCAAATCCAAAAAGGCAAATAAAAAACAAGGAAGGGGTAAGGGAAACTATTCATGCAAGATGTGCGACAGATCGTTCAAGACACAAGAGGATATAACCAGACACTCGGCCACCCATGACCCAAACAAGCCTCATCGATGTCAGTTCGGCATGTGTCGATGGTCATTCAAGACCGAATTTGACTTACTAGTTCACACCAACATCTATCACTCGGATGGGAAAAACAACGAATGCACCGTTTGCAGAAAGACGTTTAAACATTCTCAAAACTTACGCCAACATATGATGACGCATCGGCCCACAAAACGATATAAATGCAACCACTGTGGCAAAGGTTTCACGCACTTGCAACATTTGAAATCTCACGAGAGACTTCACCGTCCAGACCTTCAACCGTTCTTGTGCACTGAATGCGGGAGTCCTTTCCTGACAAAAGACAGGTTAAAATACCACATGAAGATTCACTCGGACAAAACGCTGACTTGCGACATATGCGTCAAGACATTTAGTAGCATAACAGGATACAATTATCATCTAAAAATTCATTCAGGGGAGCGTCCACACATGTGCCAAATTTGCGGCAAAACATTCAAAATACCCTCGGAGCTGAAGAAACACACATTGAACATTCACGAGCGGGTCAAACCCAAAGGTGTCAGTGAAAATCATCCGATGATGTGCAAAGTTTGCGGCGACGTCAAGAACAGTGTGCCCGAACTCACGCAGCACATGAAGATTCACACTTCCCAACACTTCTGCCCGTTGTGTCCCAAGAATTTCTCCTTAGAAAAGAATCTCATCCTTCACATGCGGACGCATCCATTAGGAACTAGGTCATTCGTGTGTGGTAAATGCAACTCGGCCTACAATACCAGGTCCTGTCTCTTCACTCATGAGATCCGCTGCCTCAAAACGCGGGAGTTTTTGCCGTGCACTTACTGCGATAAGACTTTCGCCACGAAGCCGGAGCTGGTACATCACACGAGGACTCATACGGGAGAAAAGCCATTCGTCTGCAATGAgtgcggcagagcgttcgcacggaatggcaccctccaggggcacatacggacacacacaggagagaggccgtttgaatgcagagtatgcgacagagccttctgcacaacgggggctctacgattccacatgaagtcgcatttcACATTACTCCAAGAAGATGAAATACTCTCGAAAATTTCTTCCGGCGAGCTGAAATTGACAGCAGACACTTCGAAACCCGGAAACGCCATAAAATGGGAACCGGCCAAAGCGGTGGGCGACACCTGCACTCTACCGGAGTCTGAAAATACACAGGAGTACAAAAAGGATGTATCAAACGACAATAAAAACGTTATTTCATCTAGCGAAATGGACTTGATCGAGCAGGAGGTCGAGAAAGAAGTCCATCAAAGTTTTGTTGTCATCCCTCCTACGACTTCAGAGATTCTAGGTCACATCAGTCAGCAGGAGTCGCATCTTCCGAGAAAGAAGAACAGCATAGTCTTGCATCAGTTAGGCGCTAGTGGCGAAGGCATTATCGTTGAAATATTTGATGACCGAAATCAAGATATCGAAGAAACAATATTGACGTAA
Protein Sequence: MEPDLLSTNYDRLKTNTLPTKAVPTDSDLDEVCFPGNNMESRSKSRDIKNEVQEKMERLCRTCLVEGGSEVMKGLFSMGDPPTNREYQDMVTSCTGITIEEDDGLPRQLCIMCANEVSSLFTFKKKCAKVDVCLRKLLRNPNEKGLEDLVELSRLGDIEKDLFFVNTEDSDTSKNYCKKKRAMSSPENTKISPDTLDYSVDSSVAKTASDSVSPLKSNLNRFDGYENTDDEEMNMPISNYDPLTLLTSKKDGKRKISSDILERDKNVATVVAFACRKCDMHFLSFEELCKHSVMHPQITDDLKLVCRYCDETFSYQRLVIPHIRSAHADLARFQCGYCGEKWKVFTELKEHLVNHSSGDTFYKMADRRVKEEMCSDDDDDDDYTLDTFVSCAQSNQSESENSSPLKKLKASSSRHVKKSDKLRCNICKKFFGGRETLEAHLLQEHGLENMNLEIHSVKLILDNSAVKLENNGNLDEHNGVLSKAKPVKKAIKTIGKSKKANKKQGRGKGNYSCKMCDRSFKTQEDITRHSATHDPNKPHRCQFGMCRWSFKTEFDLLVHTNIYHSDGKNNECTVCRKTFKHSQNLRQHMMTHRPTKRYKCNHCGKGFTHLQHLKSHERLHRPDLQPFLCTECGSPFLTKDRLKYHMKIHSDKTLTCDICVKTFSSITGYNYHLKIHSGERPHMCQICGKTFKIPSELKKHTLNIHERVKPKGVSENHPMMCKVCGDVKNSVPELTQHMKIHTSQHFCPLCPKNFSLEKNLILHMRTHPLGTRSFVCGKCNSAYNTRSCLFTHEIRCLKTREFLPCTYCDKTFATKPELVHHTRTHTGEKPFVCNECGRAFARNGTLQGHIRTHTGERPFECRVCDRAFCTTGALRFHMKSHFTLLQEDEILSKISSGELKLTADTSKPGNAIKWEPAKAVGDTCTLPESENTQEYKKDVSNDNKNVISSSEMDLIEQEVEKEVHQSFVVIPPTTSEILGHISQQESHLPRKKNSIVLHQLGASGEGIIVEIFDDRNQDIEETILT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00799450;
90% Identity: -
80% Identity: -