Hkul001814.1
Basic Information
- Insect
- Himalopsyche kuldschensis
- Gene Symbol
- bab1
- Assembly
- GCA_028554975.1
- Location
- JAHFWI010000042.1:1341948-1343140[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-18 5.5e-15 55.4 0.0 1 43 28 71 28 73 0.95 2 2 1.4 3.3e+03 -1.5 1.6 6 15 160 169 159 170 0.87
Sequence Information
- Coding Sequence
- ATGTGGCAGAAATGCTGGAACACTAATCAATCTCTGGTGCATAACTTACGCTTTCGCGAGAGGGGTCCCCTCAAATCTTGGAGACCGGAGACCATGGCTGAAGCCATTTTCTCCGTTCTCAAGGAGGGCCTATCCCTCTCTCAGGCTGCCCGAAAGTACGACATTCCATACCCAACCTTTGTTCTATACGCCAACCGAGTTCACAACATGCTAGGACCGAGTGCTGACGGAGGTGCAGAATTGAGACCCAAAGGAAGAGGACGACCACAGCGCATCTTGCTTGGAGTGTGGCCTGATGAGCATATCAGAGGTGTGATACGAGCAGTTGTCTTCAGAGATTCTCACAGCGCTCACCACATAAAAGAGGAACCATTACCGTCTTACCCAGCAATTACCGATTCAATGACAGCACAAAATTACAGTTCAGTTCCGTGCGGCAATGGCTCAGATGGAGCCATGTCACCAGGAGTAGCCGCTGCCGCAGCAGTGGCTGCCGTAGCCCATGGCCTCTGA
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGAELRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDSHSAHHIKEEPLPSYPAITDSMTAQNYSSVPCGNGSDGAMSPGVAAAAAVAAVAHGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -