Basic Information

Gene Symbol
Jarid2
Assembly
GCA_028554975.1
Location
JAHFWI010000080.1:784676-800031[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-18 4e-15 56.6 0.0 6 89 1294 1375 1289 1375 0.91

Sequence Information

Coding Sequence
ATGGCTAAGGCAACAGTTAAAAGAAGGAAAAATGCCACTGCACCACTCAGTATTGGAAAACGAATCAAAGTGCAAGCTCAGAGAAAATTTGCTCTCGGAGCTGCAATCATTCCAGTACAGCTGCCAAAGGAAACTTCGAGTCCTGTTGTTGTAGAACCTTATAAAGAACCGCCTCGGGAAATCAAGCACAGTCTCAATTCAAACACCAAAGCGAAGACTGAAGATTTCCTCACTTTTTTGTGTTTCAAAGGTACTTCAGAAATAACACCTGCCGATCCTATCTCGCAAATTCACCGTGAGCAGTACTCATCCAAAAATTTGGTTGCCGTTCAACAAAGTAGGCTCCATAACAACAGCCCACAGCCTTCTACATCCATACAAGGATTCATTCCATTTGGTGTGCGTAAACAAGCCTCGCAGTTTCCCGCTCGTAATACGAATACTCAACTTACAATACAAGCACTGAGAAGCAAATATAACAGAGAAAAGCAAGCAAAACTGTGCGCTTTGGCATTCAAGAAAAGCGGAGATGTTTGCAGTCAACCGAAAAGGGTTCAAACACGATCTACTAAAGAAAGTAAGCTTTCTAAATCTGCAAGCAAAAGAAAGCCCAAATGTGTCCCTTCTAGTTTTAAGGTTAATAGGCAGCCGAATAGTCGAACCAGACCCGGTCGAATTGAGAAACCCGCCGTTAAAGCCAAGATAGTTCAAAAAAGCTCAGAAAAAAATGTGTCGCTCAGAACCAGAGTTGTATCTGTTTACGCAACATCCAGATTGAATGATAGCAAATCTACTTCAAAAGGCTATGAAGTAAAGCAATCTTTCAAAAAGCAAGTCGGAAATGTTAAACAGTTACCGGCACAAAATGTGAGAGTCGTATCAGATGAAAAAAACAGCAGGCAGGGTAAAAATATTAAGAAAATATCTCAGAAGGTAACTAAGAATAATCAGGTCTCTAGTCCAATAAAAAATCAGGTAAATGCAGCAGGAAATGTCAGAACAAGCCCCAGAAATAGTATGATTACAAGAAAGGGAGTGTTCTCTAAAAATAATCTAAAAAGTAGCTTAATGAATTCGTCAAATTTATGTCAAACAAGAGCAGGAACCGTAAGGAAATTTGTTACCCCTAATATGAAAAACAAAATTATTGAAGTGACCAAAGAAAAAAAGGAAACGCCGCCAATTGTTACGACATCGAAGAAAAAAAAGAAACCCTCCGATGTTATAGAATTTTCATCTGATGATGATGAACCTCTGTACAAAAAACTTGCTTCGGAAGTTAAATCACAATGCAGAGATTCATCAGTTGTGGAAAAAGAAATCAAATCAAATGATCCGAAATTAGATGTCAAAGGTGTTGCCAAGGTGCATGATACTCGCAAAAATATTAAATGTGAAACTGTGATAGATAGCCCATTAAAGAATACTCAAATTGCTAAAATTGTGCCAGTCGATAAGACTACCAAAACGGAAGCAATAAGTCGGACAACGAGGCAAAATTTAAAAAGTCCCTCAAATGTACCTACTAGCACTTCAAATAGTACTTCTGACGTGTCACCAACAGTTAAATGTGTACCAAAAGTTATACAGAAAACTCCCACGGTGCCGCTTCAAATCGCTACTCAAAATTTGAAGTTTTTGAATGATCGAAAGAAGAAAATTGATAAACCAGAAATAGTGAATACAAATGTTAAAACACCAGATGTGATAGTTGGTAAAACTCCTAAAAGTAATCTTGATAACGATGTCAAACACGAAAGTAGTGCGAAACGAAGAAAGTTCAGTAGCTCTTCTGATTTACTTTGTCCTACAGAAATTGAGCAGTTGGTTAAAGAATTGGAGAAAAGTTTCAGTGATTCAGATGAAGAACCGCTCGCTGCTAAAATATTGGAGACCACTTCAAAATCTTCAAATACTACGAAACCATTGACTAAACCTAAGAAAGTTAAAAATATAAAAATCAAAACAGTGACAACTAAAAAACCTAATCTGTCAATTTTGATTGACACAGAGACGAGAGAAATTGCTGACAATCATGTTAAAATTGTCCTTGATACGTCAATTCCGCAAACTTCAAGTAAAAAAGATACTAATCTAATCCCATCCCAAGAAGAATCATTGAAGATCTTTGGTATACCCAAAACTGAAGTAGTCAAGAAAAGTATTGTAAAGAAAAGTGAAACCTCCAAAGGTGAAAAGAATAAAGGTCATGCAGCAACAGAACCAAAACGGAAATCTGCGACTGATTCTCAAATTGCTGCGGCAAATCTGTCTAAAATGGAGTGCAAAGATAATCGAAATAGGAAGTTTATCAAATCAAAGGAATATATCGAGCGGTGGCTTGACAGCAGTCTCCGTCTAGCTGCTGATAGTCCCAGTAGTGAACTTGTGTCGATTCATGGAATAAAAACCACGGCGGTTGATTTACCGCTTTCAGAACCTGTGCCACTTCTGAGTCTTTCGAATATATCAGACAAAAATATTCAATTAGTACCAGGAATCAGTCATATGATTAAACAATCTCCAGATAAAAAACGAATCATTGAAAACAAACGTATACAGGTGCAACCGATGAAATTAAACATTCTTCCTGATGCCTTAAAAGAAATGGATTCGTCGGATTTGCCAGCATTTTCTAAATTGGGATTGACTGACCTATCGTTGAATATTTATGAATTTGATAGTGAATCTGAAATGGTTACGTTCCCTCGTAAATCGACAACTTCTAAACCTCCAGAGAATTGTGCATGGAAGCCAAAGTTCCCTAAGGATTTATCTAAATGTAAAACATTAACTCCTTCCTATAATACAGTTAAAAGAAAAGCTAATTATACTTTTTCAATTGAAGAATCCGATTCCAGTGTGTCAAAGAAGGTTATTTCTCCTGAAATCTGTGCTAAAAACACTCCTAGTGGGATTATGCCATTGGAAACAGTTGAATTACCGATATCGGTCACTGCTGAAGACTCTTCGTTTGATGTCCATACCATAGTTAATAGTGAAGATACACCAACACTCAATCAACAAACTCAACCCATTACTATCTCAGACTCTAGTACAATGTGTGGTAAAAGTACGCCAAATGATGTCAATGTAAATGGAGATGATTCTGAAGGGCATCTGTTTTATATACCGTTAGCGGGCGTAAGCAAAACTGGTGTTAATATGGAACATTTGATTCAGGGTGTAGCTGTCAAATTAGGAACTCAAGGACCCGACGGTCCACACCAGCGTGTTATAATGCGAGCTAAGCTTGTGACAAAATCCCAAGTGGGCAACAGCAAAAATGTCAGTGAAAATCTCGCCAATCAGGTCGGTCCCGTTCAAGATATGGTGAGGAGCGTAATGGGGACCATACCTACGACAACTCCGTTTCAAAATAACTTCAAGCCAACTGTCGAGCGAAAGTCTATGGATACACCAGTATATAATGTGAATACGTCTCCAGTCCTACCAAAGTTACTCCAAACGCCTCAGGCTAACAAAGTTACAGTCGAAGTTATGCCATTTCAAAGAGGAAGTAGCAAATCAAGCACTTGCAGTTCGCAGCGATCTACCAATGCTCAGAAACGTGGACCAGTGTGGAATACTAAAGTTGGTGAAGTCATAAATCATAGTAATAATACAGCGTTTCCTCAAATTGATGATCCAGCTCGAATGGTTGAAGCTCCGGTTTTCAGGCCAACAGAAAAAGAATTTCAGGACCCATTAGAATTTATTGAAAAAATAAGTCCCGTAGCTGCAAGATACGGCCTCTGCAGAATAGTACCTCCAGCCAGCTTTAAATCTGAATGCAAAATATCTGACGATATGAGGTTCACGCCACACAACCAATACCTTCACCGGATGCTATACAGATGGGGACCCTCTTCGAGGGAAATGTGCGCCATCAAGAAATATTTAGCCACTCAGAGTGTTTCCTTCAAACAGCCACCATCGCTCAGTGCTATTGAAGTAGACCTGCCAAAGCTTTACCACATTGTCCAAAATATGGGTGGATTAAAGAAAGTCTTGGAGAAGAAAATGTGGTTGAAAGTTGCTGAGGAGATGTGCATACCACTTAATGTGAACTATATGGACATTCGGTTAGATGAAATATACTGCAAATATCTACTGCCCTATGACACACTGTCTGTTGAGGAAAGGCGTAAACTTTTTGAATCGGTGGATTTAGAATGGGAAAAACGTCAAAGTAGAATGGTTTTTCGAGCGGCAAACCCGCTCAGCTTCCTCTGCGAAACTGACTTGGACGAGCAAGAGTATGACATCACAGAAGACATCGAAGAGTGCATTACCCGTGGAAAATCAATGACGCTTTGTTCGTTTGCCAGAGTGGCGAAAAATACCATGACAATGCACTACGGCAAGACCAATGTACAGCCCAATCCTGACGAGGTGGAATCAAAATTTTGGCAGTATGTAACTTCGAGAAAGAGTCATGTATGCGTCAGCACTGGATCCATTGATTCAAGTGTTTGGGGATACGGATTCCCCAATGCCAAAACAAAGAATACGCCGATCTCCAAACATCCATGGAATCTTAAGGTTCTTACAAACAACAGTGGATCTGTACTACGGTCTCTTGGTCCCATTATGGGTGTTACTGTACCCACATTACATGTTGGCATGGCATTCAGCGCTTGCTGCTGGTACCGAGATCCCCACGGCCTGCCATGGATTGAATATCTCCACGAAGGCGCTCCGAAGATATGGTATGGTGTGCCAGACAGTCAGAGTGCAAAATTCAAAGAGGCGCTCACGTCAATTGTCCCTGGGTATTGTCAAAGGAAGACAATTTGGCTGCTGTCAGATACAACAATGGTGCCGCCCACGATGCTGACTGAACATGGTGTATCCTTATGTCGCACCGTTCAACAGCCTGGAGAATATATACTAGTTTTTCCTAAAGCATTCACTTCAAGTATATGCACCGGATACAATGTTTCCGAGAGTGTTTATTTTGCAAGTAATAATTGGCTTGATACTGCTCATCAAGATTTTACGGATATTCGAAATAGTTGTGAGCCTTCAATGTTTTCACTCGAGAGGTTGATAGTGGCAATATCAGAAGATGTAAGATCATCATACCAAGTATTGAAGCAGATTCTTCCAACACTTAATAAAATCATCCAAACGGAGAAGCATCACCGTGAAAGACTATTCAACTTCGGTCTCAAGTCATCTGAGAAGTCGCAAATTTTGACTGGAAAGAAAAAGATAGCAAAACGACAGGACGAGGCTGAAGAATGTCACCGATGTCGAACTAATCTCTACTTGTCCATGTTGTACGGTAAGGAAGAAGGCAGCGTTTATTGTTTGGTTCATGGAGCAGAATTACTTGCAGCAAACCCGTCGCAAGTTGACAGCTGTAAATTAGTATACCTCCATTCAATTCACGAACTGGACAAATTACTGTCAAACCTGATCGAGCGAATCAACCATTTAGTCAACAAAAAATCCACCAAGCTGAAATAA
Protein Sequence
MAKATVKRRKNATAPLSIGKRIKVQAQRKFALGAAIIPVQLPKETSSPVVVEPYKEPPREIKHSLNSNTKAKTEDFLTFLCFKGTSEITPADPISQIHREQYSSKNLVAVQQSRLHNNSPQPSTSIQGFIPFGVRKQASQFPARNTNTQLTIQALRSKYNREKQAKLCALAFKKSGDVCSQPKRVQTRSTKESKLSKSASKRKPKCVPSSFKVNRQPNSRTRPGRIEKPAVKAKIVQKSSEKNVSLRTRVVSVYATSRLNDSKSTSKGYEVKQSFKKQVGNVKQLPAQNVRVVSDEKNSRQGKNIKKISQKVTKNNQVSSPIKNQVNAAGNVRTSPRNSMITRKGVFSKNNLKSSLMNSSNLCQTRAGTVRKFVTPNMKNKIIEVTKEKKETPPIVTTSKKKKKPSDVIEFSSDDDEPLYKKLASEVKSQCRDSSVVEKEIKSNDPKLDVKGVAKVHDTRKNIKCETVIDSPLKNTQIAKIVPVDKTTKTEAISRTTRQNLKSPSNVPTSTSNSTSDVSPTVKCVPKVIQKTPTVPLQIATQNLKFLNDRKKKIDKPEIVNTNVKTPDVIVGKTPKSNLDNDVKHESSAKRRKFSSSSDLLCPTEIEQLVKELEKSFSDSDEEPLAAKILETTSKSSNTTKPLTKPKKVKNIKIKTVTTKKPNLSILIDTETREIADNHVKIVLDTSIPQTSSKKDTNLIPSQEESLKIFGIPKTEVVKKSIVKKSETSKGEKNKGHAATEPKRKSATDSQIAAANLSKMECKDNRNRKFIKSKEYIERWLDSSLRLAADSPSSELVSIHGIKTTAVDLPLSEPVPLLSLSNISDKNIQLVPGISHMIKQSPDKKRIIENKRIQVQPMKLNILPDALKEMDSSDLPAFSKLGLTDLSLNIYEFDSESEMVTFPRKSTTSKPPENCAWKPKFPKDLSKCKTLTPSYNTVKRKANYTFSIEESDSSVSKKVISPEICAKNTPSGIMPLETVELPISVTAEDSSFDVHTIVNSEDTPTLNQQTQPITISDSSTMCGKSTPNDVNVNGDDSEGHLFYIPLAGVSKTGVNMEHLIQGVAVKLGTQGPDGPHQRVIMRAKLVTKSQVGNSKNVSENLANQVGPVQDMVRSVMGTIPTTTPFQNNFKPTVERKSMDTPVYNVNTSPVLPKLLQTPQANKVTVEVMPFQRGSSKSSTCSSQRSTNAQKRGPVWNTKVGEVINHSNNTAFPQIDDPARMVEAPVFRPTEKEFQDPLEFIEKISPVAARYGLCRIVPPASFKSECKISDDMRFTPHNQYLHRMLYRWGPSSREMCAIKKYLATQSVSFKQPPSLSAIEVDLPKLYHIVQNMGGLKKVLEKKMWLKVAEEMCIPLNVNYMDIRLDEIYCKYLLPYDTLSVEERRKLFESVDLEWEKRQSRMVFRAANPLSFLCETDLDEQEYDITEDIEECITRGKSMTLCSFARVAKNTMTMHYGKTNVQPNPDEVESKFWQYVTSRKSHVCVSTGSIDSSVWGYGFPNAKTKNTPISKHPWNLKVLTNNSGSVLRSLGPIMGVTVPTLHVGMAFSACCWYRDPHGLPWIEYLHEGAPKIWYGVPDSQSAKFKEALTSIVPGYCQRKTIWLLSDTTMVPPTMLTEHGVSLCRTVQQPGEYILVFPKAFTSSICTGYNVSESVYFASNNWLDTAHQDFTDIRNSCEPSMFSLERLIVAISEDVRSSYQVLKQILPTLNKIIQTEKHHRERLFNFGLKSSEKSQILTGKKKIAKRQDEAEECHRCRTNLYLSMLYGKEEGSVYCLVHGAELLAANPSQVDSCKLVYLHSIHELDKLLSNLIERINHLVNKKSTKLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00799994;
90% Identity
-
80% Identity
-