Basic Information

Insect: Himalopsyche japonica
Gene Symbol: -
Assembly: GCA_028555115.1
Location: JAHFWJ010000480.1:6002372-6010029[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.018 1.3 10.1 0.8 2 23 141 163 140 163 0.92

2 16 0.25 18 6.4 0.1 2 23 465 489 464 489 0.93

3 16 0.45 32 5.7 2.5 1 22 497 518 497 518 0.94

4 16 0.16 11 7.1 0.0 1 23 527 549 527 549 0.97

5 16 3.6 2.6e+02 2.8 0.1 1 23 597 620 597 620 0.90

6 16 2.3 1.6e+02 3.5 1.4 1 23 635 658 635 658 0.90

7 16 0.71 51 5.0 0.1 2 23 709 731 708 731 0.82

8 16 0.00017 0.012 16.4 1.0 1 23 768 791 768 791 0.94

9 16 0.00032 0.022 15.6 2.7 1 23 798 820 798 820 0.98

10 16 2.5e-05 0.0018 19.1 2.7 1 23 825 847 825 847 0.96

11 16 0.00021 0.015 16.2 1.5 1 23 853 875 853 875 0.98

12 16 0.02 1.4 9.9 3.4 1 23 881 903 881 903 0.97

13 16 1.2e-06 8.9e-05 23.2 1.7 2 23 910 931 910 931 0.97

14 16 9e-05 0.0064 17.3 0.5 2 23 938 960 937 960 0.94

15 16 0.0003 0.021 15.7 1.8 3 23 969 989 967 989 0.96

16 16 0.01 0.73 10.8 2.2 2 23 996 1018 995 1018 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.018	1.3	10.1	0.8	2	23	141	163	140	163	0.92
2	16	0.25	18	6.4	0.1	2	23	465	489	464	489	0.93
3	16	0.45	32	5.7	2.5	1	22	497	518	497	518	0.94
4	16	0.16	11	7.1	0.0	1	23	527	549	527	549	0.97
5	16	3.6	2.6e+02	2.8	0.1	1	23	597	620	597	620	0.90
6	16	2.3	1.6e+02	3.5	1.4	1	23	635	658	635	658	0.90
7	16	0.71	51	5.0	0.1	2	23	709	731	708	731	0.82
8	16	0.00017	0.012	16.4	1.0	1	23	768	791	768	791	0.94
9	16	0.00032	0.022	15.6	2.7	1	23	798	820	798	820	0.98
10	16	2.5e-05	0.0018	19.1	2.7	1	23	825	847	825	847	0.96
11	16	0.00021	0.015	16.2	1.5	1	23	853	875	853	875	0.98
12	16	0.02	1.4	9.9	3.4	1	23	881	903	881	903	0.97
13	16	1.2e-06	8.9e-05	23.2	1.7	2	23	910	931	910	931	0.97
14	16	9e-05	0.0064	17.3	0.5	2	23	938	960	937	960	0.94
15	16	0.0003	0.021	15.7	1.8	3	23	969	989	967	989	0.96
16	16	0.01	0.73	10.8	2.2	2	23	996	1018	995	1018	0.96

Sequence Information

Coding Sequence: ATGACTGAAGCTTTTTGTAGCCAAGAATCCGACGAATCGGATAACGAACCTCTGTCGTTGATTATTACTGAAAGAAATGGGAGAGATAACGAAGATGTACCTCAAGACTTATCACGAATTACTATATCACCGGAATTACCACAGAATTTATCGGTAAATTTGCCTCAAACTTCACCATTGGAACTGAGCACTCGACCATTGTTCACGAAGATTTTTGAAAAAAAGAAATCTTGGAGAAAAACTGAAAATATTCCCATCACAAATGATCATGAAGTGTCTGTGGACAATGGTTTTATTGAAAACGGCCAAGGGTATTCAAATACCTTCATTACTACGTATATCATGCCACCGATTAAATTGGATGAGGGAATGTCAGACGTTTGGCTTGATGCAAAATCAATCAATCAAGTCGGTCCAATGTCATGTGTAATATGCTTAGAGTGCTTTATAAACAAGTCGAAATTGATCATGCATTATATATTGAATCACAACAAAGCCTACTGTGGAACATGCAGGTATTTGGTGCAAGACAATAATGCCTGGGCAACACATTGGCGCTATCACATGCCTCTGAGGTGCTCCCATTGTGAAGATGAATTTTTAGAGGAGGACGGTCTTAGGATGCACTACAGAGCATGCCATCTTCTCTCCCACTGCCGCATGTGCAGTTTGATGTTACCATCTGGAGCCATTTATGACGATCATCTCAAGAAAAAACATATGGTCACTGTCAGTTATATAGACGAAGAAAATGACGCTTGGTCCACAGTTCAACCAAATTCTTGGAATTTTTCATGTTCCCTTTGCAAAAAAAATAACCTACAGAATGGAGACTTTGTGAGACATTTCTTGTATCATCACAAATTCTCACTGAAATGTTTAGCTAGTTTAGTAAATGCAAAAGATCTCGGATTCTCAGTACTGGGGGCCAGCTTGGAAACTTTGACCGGATCTGCTGAATGTGATAAACCCTTTCAGACGGATAGTTCATGGGAAGAGAAAAAAGTCAACGATTCACCTGATGGAAAAGATTCTGTCAACGGTAATGAAAATCCGGAAGACAACTATCAATTTCTAGAAGCATTAATACCAGAAATAAAGCAGGAAGTTCTAAGTGATGATGAAAATATACAAACCGGTTTGAACTTTGATTCAAATAATATCAAGCATGAATATGAAACATTAGAACCGGGAAGCGATCTTTCCTTGGCGAATGAAAAATTTCTTCTCAGGTATACCGGCAGGGAGGATTTCGATTTATCAGTCGTAGAGTTTGTTCCGATCAggaaatatgataccgattatgttgtcaacacatatattgatatgaacacgtcaattgccaccgctgataattttttagctgaattaaaaattgAAAAATTTGATATGGTGTGTCCCTTATGCTTTCCCGCAAAAACGTTTGGATCACTTTCTGAATTGACCGATCACGTGATAAAAAATCATAGCTTGAAGTATGTGCCGAATCACACTTGCCGGTTGTGCATGACATTTTTTCACACTCAGTCTGATATGCAAAAACATATTATCACCGAGAAAGAAGACTTCAGACATTTATATATGTGTCAAATCTGTGATATTGAACTTGAAAGTAGAGAGTTGGCGCGGAATCATCTCTCAGTCCATTGGGAGGTGTTAAAAGAACTGGAATGCACTAGTCCTCAGATTGGCTTCAAATGTCGTTACTGTTACCGATTATTTTGGCATGAAATGGATCGGGAGCGTCACCATTGCGAAGAACACTTTGCCTCATTCAAAGAAAACTTCTATAAATGTATTACTTGTCAAATGATCTTCAGTGATAAGTTGTGGTGGGCAAGTCATGTTATTCAAGAACATGGTGATAACCCGGGGACCGAAGACTGTCCGGCATGGTGTGCCTTCAAGTGTGTTCTCTGCTGCCGAGTTTTTAAAGCTGTCAGTGATCTACGTGAACATTTCTTAGATTTACATCCGACAGATCGCAGACTGTACTGTGCCGTTGCTGGCTGTATATCAAAGCCGTTTAAAATGGGAAGATATCTCAAGCAGCATCATGAGATTATTCATAATATTGGACGCAGTAAAAGTTTAGCAGCTCTCGGGGGATTAAACCGAGCCTTACAGTGTGAAGAGTGCGGGAAAGTCATGCGGACTGTTCGAGCGGCAGCCACACACAGAACTGTTGTGCACGGACACAAATCAACTACCCGATTTAAATGCCGTTTATGCAATGTCGGTCTGCCCTCTATTCAAGACAGAAAACTCCATTACATGCTTTTACATCCTGGAATTGCTCCTTTCAACTGCACCGTATGTGGGAAAGGCTACAACAACAAATCGGCACTGTATACGCATCGATCGCAAAGTCATTCTGTCCACCTCATGACATACACATGTTCATTTTGCAACAAAAATTTCAATAAACGTGATTCATACAAAGAACATTTACTGATTCACATCGGTCCGAGGCATGCTTGCCCTCATTGTTCGAGGATAtttgttcaacgatctaatatgctgcgtcacataagacttcacactggtgagaaaccttacccatgcgtacactgtgaaaaaaccttcgctgacaaaggagcCTGCAACGCCCATATAAGGACGCATACCCGCCAAGATGCTCACCCATGTATGTACTGTGGTCAGGAATTCTTACAAAAGCAGAAACTTAAGTATCATCTGCGGAAACATACTGGTGAAGATTTGGAAACCTGTGTAGTCTGTGAAAAGAAATTTACAAATCAAACTAATCTCCGAGAGCACATGAGGACCCATGATGATTCTTCTCCAATTTCCTGCGAGCAGTGTGGCAAAGTTTTCATGTCACGAAGATACATGGAGAGACATATTCGAGATAATCACAGCAGCACGGCAGAGGTCCACTTGTGCCCACTTTGTGGCCGTGCATGTCCACGACTGGCTGCGCTTCGACATCATATTCTAACGCATGCAACACTCAAACAAATGCAGTGTCTTCTGTGTCCTAAACGTTACAATGGAAAGAAAAGTATGAACAAACATCTAAAGAAACGTCATGGTATCAATCTCACGGACGATCGCTACAGCACTAGCTTCTACCAGTTGGACCCGAGACAGTGCGGATTGGGCCTGGACGAAGATACCATTTGTCGAGTATTTGGTCCTGAGAAGAATATCAAACCGAAACTGCCCATCGATTTCAGCCAGATGAATTTTGCAGTTCACAAGTCCCCGAGAGGTACCAGAAAGTACGAGGTCGCTCGTCAAGAAGAAGACTCTGACACTGACTACAAACCTGCCCAAAATATTATTAAATTATTTAGAACAGATAAAAAAGAATCTACAGAAGAAGAGGGTCCGATTTCTGGGTTAGAACTTGCCACGATTAGAACCCGTGCGAGACGTGAGACTTCCAAGAATGTCTCATACGCTTTTGGCTCAGATGATGATGATGATAAAAGAATTTATGCAAAACACAAGAAGAGTAAAGTGAAATTGAAAAAGAAACATAAAAACTCTAGCGTTCTGAAAAACAATATGCTTGATAATTTTGGAGACGGTCAGGAATGCGAAATACAAGAACCCATGTTTCCTCTCGTAGAAATTAAATGTGAGCCTGTTGATTATGATGAAGCTGAATGCAATTAA
Protein Sequence: MTEAFCSQESDESDNEPLSLIITERNGRDNEDVPQDLSRITISPELPQNLSVNLPQTSPLELSTRPLFTKIFEKKKSWRKTENIPITNDHEVSVDNGFIENGQGYSNTFITTYIMPPIKLDEGMSDVWLDAKSINQVGPMSCVICLECFINKSKLIMHYILNHNKAYCGTCRYLVQDNNAWATHWRYHMPLRCSHCEDEFLEEDGLRMHYRACHLLSHCRMCSLMLPSGAIYDDHLKKKHMVTVSYIDEENDAWSTVQPNSWNFSCSLCKKNNLQNGDFVRHFLYHHKFSLKCLASLVNAKDLGFSVLGASLETLTGSAECDKPFQTDSSWEEKKVNDSPDGKDSVNGNENPEDNYQFLEALIPEIKQEVLSDDENIQTGLNFDSNNIKHEYETLEPGSDLSLANEKFLLRYTGREDFDLSVVEFVPIRKYDTDYVVNTYIDMNTSIATADNFLAELKIEKFDMVCPLCFPAKTFGSLSELTDHVIKNHSLKYVPNHTCRLCMTFFHTQSDMQKHIITEKEDFRHLYMCQICDIELESRELARNHLSVHWEVLKELECTSPQIGFKCRYCYRLFWHEMDRERHHCEEHFASFKENFYKCITCQMIFSDKLWWASHVIQEHGDNPGTEDCPAWCAFKCVLCCRVFKAVSDLREHFLDLHPTDRRLYCAVAGCISKPFKMGRYLKQHHEIIHNIGRSKSLAALGGLNRALQCEECGKVMRTVRAAATHRTVVHGHKSTTRFKCRLCNVGLPSIQDRKLHYMLLHPGIAPFNCTVCGKGYNNKSALYTHRSQSHSVHLMTYTCSFCNKNFNKRDSYKEHLLIHIGPRHACPHCSRIFVQRSNMLRHIRLHTGEKPYPCVHCEKTFADKGACNAHIRTHTRQDAHPCMYCGQEFLQKQKLKYHLRKHTGEDLETCVVCEKKFTNQTNLREHMRTHDDSSPISCEQCGKVFMSRRYMERHIRDNHSSTAEVHLCPLCGRACPRLAALRHHILTHATLKQMQCLLCPKRYNGKKSMNKHLKKRHGINLTDDRYSTSFYQLDPRQCGLGLDEDTICRVFGPEKNIKPKLPIDFSQMNFAVHKSPRGTRKYEVARQEEDSDTDYKPAQNIIKLFRTDKKESTEEEGPISGLELATIRTRARRETSKNVSYAFGSDDDDDKRIYAKHKKSKVKLKKKHKNSSVLKNNMLDNFGDGQECEIQEPMFPLVEIKCEPVDYDEAECN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00801229; iTF_00799602;
90% Identity: iTF_00799602;
80% Identity: -