Basic Information

Insect: Himalopsyche japonica
Gene Symbol: Rreb1
Assembly: GCA_028555115.1
Location: JAHFWJ010000217.1:3066382-3076191[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3.5e-06 0.00025 21.8 0.5 1 23 87 109 87 109 0.98

2 15 7.3e-05 0.0052 17.6 4.6 1 23 115 137 115 137 0.99

3 15 0.11 7.9 7.6 0.1 2 23 198 221 198 221 0.91

4 15 0.12 8.8 7.4 0.2 2 23 227 249 226 249 0.93

5 15 3.2 2.3e+02 3.0 1.4 1 16 298 313 298 317 0.77

6 15 0.11 8 7.6 0.1 1 23 465 487 465 487 0.97

7 15 0.00054 0.039 14.9 0.2 1 23 496 518 496 518 0.99

8 15 0.001 0.074 14.0 2.0 1 23 524 547 524 547 0.97

9 15 0.001 0.073 14.0 2.8 1 23 981 1004 981 1004 0.96

10 15 0.00055 0.039 14.8 2.1 2 23 1348 1369 1347 1369 0.97

11 15 0.036 2.5 9.1 5.3 1 23 1375 1398 1375 1398 0.97

12 15 0.0032 0.23 12.4 0.7 1 23 1446 1470 1446 1470 0.96

13 15 5.8 4.1e+02 2.2 0.4 1 23 1561 1584 1561 1584 0.89

14 15 0.017 1.2 10.1 0.4 2 23 1647 1668 1646 1668 0.94

15 15 0.019 1.4 10.0 5.9 1 23 1674 1696 1674 1696 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3.5e-06	0.00025	21.8	0.5	1	23	87	109	87	109	0.98
2	15	7.3e-05	0.0052	17.6	4.6	1	23	115	137	115	137	0.99
3	15	0.11	7.9	7.6	0.1	2	23	198	221	198	221	0.91
4	15	0.12	8.8	7.4	0.2	2	23	227	249	226	249	0.93
5	15	3.2	2.3e+02	3.0	1.4	1	16	298	313	298	317	0.77
6	15	0.11	8	7.6	0.1	1	23	465	487	465	487	0.97
7	15	0.00054	0.039	14.9	0.2	1	23	496	518	496	518	0.99
8	15	0.001	0.074	14.0	2.0	1	23	524	547	524	547	0.97
9	15	0.001	0.073	14.0	2.8	1	23	981	1004	981	1004	0.96
10	15	0.00055	0.039	14.8	2.1	2	23	1348	1369	1347	1369	0.97
11	15	0.036	2.5	9.1	5.3	1	23	1375	1398	1375	1398	0.97
12	15	0.0032	0.23	12.4	0.7	1	23	1446	1470	1446	1470	0.96
13	15	5.8	4.1e+02	2.2	0.4	1	23	1561	1584	1561	1584	0.89
14	15	0.017	1.2	10.1	0.4	2	23	1647	1668	1646	1668	0.94
15	15	0.019	1.4	10.0	5.9	1	23	1674	1696	1674	1696	0.98

Sequence Information

Coding Sequence: ATGCAGGATATGTCGTGCCTATTCAGTGACCACGCCATTACACAGCAAAGACTTCTAAGATCAGATACCGCACTCAGCAAGTCATCGAGCGACGCCAATGAACCAAAAACCAAAGTTGTACCAAAGATCAGGAAACAAGAACCTACCGATGAGCGCTCAGTCAAAAACCTTACATCTAGTCCAAAAATTGTTTCAGAATATAAGAACACATCGCTAGAAGAGAAAGATATCAAATCTGAGAATTTGGAGCAAGTTGATTTTACCTGCAAAGTTTGCAGTAAGGTCCTCAGCTCGAATTCTAGTCTTGAGAGACACATGTTAGTTCACAGCGGCGATAGACCGTTCCGCTGCAAAATGTGCGACCTCACGTTCACCACCAACGGAAATATGCACAGGCACTCAAGGACACACAAGAAACCTCACGACCAGACCGACAGCGATGACTCCGACGACGGAGGACCGAGCTGTCTTCCCAGAACGCCAGTCAGAAAGCGTAGAATCGAATTCAACAATAACGATGACAAAGCTGGCGACGGTCCAGGTGGGAAAAAGAAATCGAAGAGTGGCGATGAAGATAATATCAGCGGTGCGCAATGTCCCGTCTGTGGTAAATCGGACTTTACGTCATCCGACAGTCTCGATGCTCACGTTGAGAAAGAACATCCGGAGCACAGTGTGGAATGTGGTTCGTGCAATTCTGTTTTCAAGGACCGTCGGGGGTTAAATTTGCACCGTTACATAGTCCATCGTAATGAAGCAAAGCACGGACAAGCTGAGAAGATATCAGGATTCAACGATTGCACTTTCGTTGATTTCTCAAGCGAAAAATTTCCACAAATCGCGAGGTCTGTCTGTGAAAAGAGCATTCATAAATCTGTCACTGAACAAAAATTCAAGTGCAAAAAATGCTCAAGGGAATTTCCCTGTGAGAGTGCTTTAGATATTCACTCCGAAGATTGCTCTATCAATGAATCTGGTGACGTCAAACGTGTGGCCTCTGACGCGAGACGCTCTTCGAGCAGCGAAGAAGACGTTCGCCGAGATTTCTTTGCAAACCTCGATCTCCAGAACAGATCTCCTCATTTTGTGCCGATTTCAAATATCGGTATCACTAACGGTATTAGAAAACCAAAACCTCACGGTGATTTCTTCGCGAATCGAGATGAACCTGTGAGACCTCCGATGGATAATTCCAAAGACTTGGCCGATATCCAGTCCATACTGTCGGTCACTTCGACTTGCGGTCTCCTTGAAAGGCTCGCCAGAAAATCCCACGATACTGAACGCGATGATATCTCTCAGTCTGAACAAATGAACAGATCTGGAGATGACCACGAGGAGGTACAAGATGTGTTTGCGTCAGAGTTCCGCAAGATGAAACTGCGCGGGGAATTCCCTTGCAGATTGTGTACGGCGATATTCCCGAATTTGAGAGCGCTCAAGGGACACAACAGAGTACATTTGAGTGGAAACGGACCGGGACCTTACAGGTGCAACATGTGTCCTCAGTCTTCGTTGGACAAGGCGGCCCTCGTGAGACACATGCGAACTCACAACGGTGACCGCCCTTATGAATGCGCTGTCTGCAATTACGCGTTCACCACCAAAGCGAATTGTGAAAGGCATCTCAGAAACCGTCACTCAAAAGTCACGAGAGAAGATGTCAAGAGATCAATAATTTATCATCCCTCAGAAGATCCCAACAATGATGATGTAAATTCAAAGCTCAATGTCCCAAGGGAAGAAATGAAGAGAACATTGATATTCAACACCCCGGAAATGGAACGTCACCACGATGATGCTGAAAGAATCACTCACCCCGATAGACTGACACCAGTGTCGCATTATACAAGAGAGCCAAACGTAATTCCTTTCAAGGATCACGGGATTACGATTCCCTTGCCACGCGAATTGTCCATAATGGTGCCACAGCCAAGAGAAATTATGCGCGCGCATTGTTCGATCGACCCCGTTATCAAGACGCCTTTGACCCAAGAGCCAGAAATCATTCAGCCGAGAATCAAAGTGAAAGGCTTCGGTCACTTGACGCAGATTCCAGACTTCGAAGAATCTGACGTCGAGAGAGAGATGGACTCTGAAGATGAAGACGAGGAGCGTTCTGAAATGTCTTACGTCGGAAAACCCCTCAATTATTCGACTGAATCACCAATGGACCTGAGCACCACAGACTGTCAAGATAACGTATTGGATTTGAGTAAAAAAAAGAACGATAAACCGGTGGACGAGCGTGCATCTGAAGCAGAACCTGAAGATTACATTCCGAAGACTATTGAATTCAATAATAATCACGCAGCCGCCGCTAGCATGTTTGAGAAAACTCAACAACAATTGGCCCTTTTGGCCCAGCAGCAACTTTTAAAAGGCCAATACCCAAAGCTGGACAATTCCGCCGGTTTTTACGCAAACCAGCTGTCGCAATTGTACAGAGGAGCTGCTCCGTTTCCAGGTCTCGGACTTCCACCGACGTTCCCTTTGAATCCATATTTCTTACAGCATCCACACTTCTTAGCTCAGCACACTAATCCACAAGAACTTGCTGAAATGAAGGAAAGAATTCAAAAAGAAATAATCAGAGGTCTACAAATGTCAGGAGGAGGTCTCGTCGGAATCGATCCTGCTAATATTTTTAATAATATGGAACGACTGCAAGCGTTTCACAACAACTTGAACCGTATCGCAAGCCCGGATGTTCAGCCTTCAACTCCTGTAATAAAGCTCGAAGAAGACTTGAAGCCCCAGTTGAGCATCAATACAGACACTCCGACGACAATCCCATTCGCCAATCCTATGCTTTCTTCACCGAAGCTGCAAAAGAAAGAAGTGATCTCAGGGCATAGTCCAAATTCCGTGAAAATGGTCATCAAGAACGGCGTTCTCATGCCAAAACAGAAGCAACGCAGATATAGAACTGAAAGACCATTTTCTTGTGAGCATTGCTCTGCACGGTTCACTTTGAGGTCTAACATGGAGAGACATATTAAGCAACAGCATCCACATTATTGGTCTCAACGTCAAAGAACGAACGTTGGAACTTTGCCGAGGAAAAATCCCGTTTCAATCATTCCACAAAATATAACTGTGCCATCGATAAACTACGAAAGCCGTTTAAACTTTATCAAGAATATTAACCAGAGTCCTAAATTAGCTGCCGTCTTGAACAATGATGATAAAGAACCGACTGCTCAAAATCCTCACGAAGGAGTACCAATGAATAAACAATATAGCATGATCTCCGACCAGGTCAAATTTGCAATTCTAGCCCAGCAGTTGAAATCTCAAAATAGTCTCTACAACAATCACAAAGAAACACGTAAAGATTCCGTTTCTGATGCACTATCAGTCAACGGAGATAACGAAGAAGAAGATGAGGAGGATGCATTGGTGATTGACGAAGAAACAAGTGATGATAAAAGCCAAGTGTCCAAAGAACTCGATTTGACAACTAACAAGACACCCCACTCTGAACCAATAGACGTTGTCACCTTGTCAGATCCTAATTCTTTGGCCAAAAAAGTGGCTGAAAAAATACTCATTGACGTTTCTGCTAAAACAAACGATATTTCCAAAGATTTCGATTGGAAGATAGCTGGAAGCTTGATCAGTAAGAACCTCAATGCTGCAAATCCAGTTATACCGACATTCGTGACACAAATAGGAAACCCTGAAAAGGTTGACGGAAACAATTCACCCAAGAGTATCCCAAACCGTTCCGAAGAAGGTGACCTCGTTCCCGTATCGAGACTTTTGGATAATGCAGTTACCCAGCTTCCGTTCGGACAATACTTCAAGAATGACTTCTCATCGCCAAACGGAGTGTCAATTGACGCCCAACGAAGAGATGCCGTGTTGCAGACACCAGGTGAAGGCTCTGAAGAGGATGAAGAAGGGCTAGTCGCTTCCTCGGGATCTACCAGCGAAGGAAATAATTCTGGTAGTGATGAGAATCGATCCGAATCGGAAACTACCGCCCAGATACCTCAGAAGAAGAAGTCAGCATATAGCCTCGCCCCAAACCGAGTGTCGTGTCAATATTGTCACCGGAAATTTCCCTGGTCTAGTTCCTTGCGACGCCATATCCTGACCCACACCGGGCAAAAACCTTTCAAGTGCCCGCACTGCCCATTGCTTTTCACCACCAAGTCCAATTGTGACCGTCACCTATTGCGTAAGCATGGAGGAACACAATCTAACCAACAGCGTCTGCAACAGCAGAAACCGTCACAGAACCCACCGCAAGAAGTCATACCAGCACCTCAGGCCCCGCCGACTTCAACCAGCCAAGGCTTTATGATGAGGAATGTACCAGAACGGCCCTATAAATGTGCAGGTTGCCCGAGTAGCACCTTTTCTACTTTGGGGAATTTGAAGAAACACATGTCGTCGAAGCACGGAATCGAAGTTAACGATAGAACTGACGGTGACGAAAGTCTACAAGCTGAAGGAAACGAATACAATTCAAGACCTGAAAGTCGTGATGGCCTAAACACTGACCGCGCCAGCTCTGATGATGAAAAAGTATCGAAGTGTGACGAAACTGAAGCAATAGATGATAAAATGTCCCCGCCGCGCGACTGGGAAAGTCAGATCAACTCTTCAAAGTTCAGTCCGTCCCGCCCACCGATTGACGGATTATCGAACATCCAAAACTGTGACCTTCCGTTCAAGTGTCATCTTTGCGAAGGGTCTTATGGAGAGAGACAAGATGCATTGGATCACATCAAGGCGTCGCATAATTCTGAATATGAATTGCTCATGTCAAAAGGTGCACTGGAATCCGGTGTCTCATTAGGGTTCGGTGAGGATTTGGGTTCTTCAGCTCAGTCAGGTCACGGAAGTGAGGGAGGTGAAGAACCAGGCAGCGAGGAGAACATCGAACAGCTGAGAGGAAAGTTCCCTGATTACGCCAATAGAAAGGttgtttgcgcattttgcatgcgtcgtttctggtcagcagaagaccttcgccgccacatgcgcacccacaccggcgagcgtccattctcctgcgatgtctgcagacgccgctTTACCCTAAAACACTCCATGCTCCGCCACCGGAAAAAGCACACCGGAGCATCATCATCTTCGGCCGCCTCCAATCGAGACCTATCCACCACAAGCGGGGATGAGGAAAACTGCTCCAAGAATTCCAACAGAACCTTTTCTCCGTCACCGTCAAACACGCATCTATCAGGAAACAACACTTCGACACCGAATACCACCAAATTAGATAAATACCACATGGCCATCAATGACAAGTGTCTATCCCACAGTCCGGAAATCCCCAGTAACGTTAACAATAATAACTCACCTCCCGGTCAAATCTACGAGGGGAAAGTTAAAATGCAGGACTTAAAAGAGATACAAGACAAAATGGTGAACAGGAACCGATACTCGAGTGACGACAATGAAGGAACTGCCGGGAACGACCTCATCGGAAACCTCTTAGGCATCAGCGACTTGGGTATGATCAACAAACTACTCTCATCCCCAGACGAAGCTGCCAAACTTCTAGGAGTTAACAATAAGTGA
Protein Sequence: MQDMSCLFSDHAITQQRLLRSDTALSKSSSDANEPKTKVVPKIRKQEPTDERSVKNLTSSPKIVSEYKNTSLEEKDIKSENLEQVDFTCKVCSKVLSSNSSLERHMLVHSGDRPFRCKMCDLTFTTNGNMHRHSRTHKKPHDQTDSDDSDDGGPSCLPRTPVRKRRIEFNNNDDKAGDGPGGKKKSKSGDEDNISGAQCPVCGKSDFTSSDSLDAHVEKEHPEHSVECGSCNSVFKDRRGLNLHRYIVHRNEAKHGQAEKISGFNDCTFVDFSSEKFPQIARSVCEKSIHKSVTEQKFKCKKCSREFPCESALDIHSEDCSINESGDVKRVASDARRSSSSEEDVRRDFFANLDLQNRSPHFVPISNIGITNGIRKPKPHGDFFANRDEPVRPPMDNSKDLADIQSILSVTSTCGLLERLARKSHDTERDDISQSEQMNRSGDDHEEVQDVFASEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRVHLSGNGPGPYRCNMCPQSSLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHSKVTREDVKRSIIYHPSEDPNNDDVNSKLNVPREEMKRTLIFNTPEMERHHDDAERITHPDRLTPVSHYTREPNVIPFKDHGITIPLPRELSIMVPQPREIMRAHCSIDPVIKTPLTQEPEIIQPRIKVKGFGHLTQIPDFEESDVEREMDSEDEDEERSEMSYVGKPLNYSTESPMDLSTTDCQDNVLDLSKKKNDKPVDERASEAEPEDYIPKTIEFNNNHAAAASMFEKTQQQLALLAQQQLLKGQYPKLDNSAGFYANQLSQLYRGAAPFPGLGLPPTFPLNPYFLQHPHFLAQHTNPQELAEMKERIQKEIIRGLQMSGGGLVGIDPANIFNNMERLQAFHNNLNRIASPDVQPSTPVIKLEEDLKPQLSINTDTPTTIPFANPMLSSPKLQKKEVISGHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPHYWSQRQRTNVGTLPRKNPVSIIPQNITVPSINYESRLNFIKNINQSPKLAAVLNNDDKEPTAQNPHEGVPMNKQYSMISDQVKFAILAQQLKSQNSLYNNHKETRKDSVSDALSVNGDNEEEDEEDALVIDEETSDDKSQVSKELDLTTNKTPHSEPIDVVTLSDPNSLAKKVAEKILIDVSAKTNDISKDFDWKIAGSLISKNLNAANPVIPTFVTQIGNPEKVDGNNSPKSIPNRSEEGDLVPVSRLLDNAVTQLPFGQYFKNDFSSPNGVSIDAQRRDAVLQTPGEGSEEDEEGLVASSGSTSEGNNSGSDENRSESETTAQIPQKKKSAYSLAPNRVSCQYCHRKFPWSSSLRRHILTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGTQSNQQRLQQQKPSQNPPQEVIPAPQAPPTSTSQGFMMRNVPERPYKCAGCPSSTFSTLGNLKKHMSSKHGIEVNDRTDGDESLQAEGNEYNSRPESRDGLNTDRASSDDEKVSKCDETEAIDDKMSPPRDWESQINSSKFSPSRPPIDGLSNIQNCDLPFKCHLCEGSYGERQDALDHIKASHNSEYELLMSKGALESGVSLGFGEDLGSSAQSGHGSEGGEEPGSEENIEQLRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCRRRFTLKHSMLRHRKKHTGASSSSAASNRDLSTTSGDEENCSKNSNRTFSPSPSNTHLSGNNTSTPNTTKLDKYHMAINDKCLSHSPEIPSNVNNNNSPPGQIYEGKVKMQDLKEIQDKMVNRNRYSSDDNEGTAGNDLIGNLLGISDLGMINKLLSSPDEAAKLLGVNNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00801214;
90% Identity: iTF_00801214;
80% Identity: -