Basic Information

Insect: Himalopsyche japonica
Gene Symbol: zfh1_2
Assembly: GCA_028555115.1
Location: JAHFWJ010000467.1:464205-473743[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0085 0.61 11.1 0.4 1 23 314 336 314 336 0.97

2 11 0.054 3.9 8.6 1.0 1 23 343 365 343 365 0.93

3 11 0.00031 0.022 15.6 0.5 1 23 369 391 369 391 0.98

4 11 6.7 4.7e+02 2.0 3.1 3 23 400 420 399 420 0.92

5 11 9.7e-06 0.00069 20.3 0.7 1 23 425 448 425 448 0.97

6 11 2.9e-05 0.0021 18.8 0.6 1 23 454 476 454 476 0.98

7 11 0.00023 0.017 16.0 0.3 1 20 482 501 482 503 0.95

8 11 6.6e-05 0.0047 17.7 0.7 1 20 515 534 515 535 0.97

9 11 0.0018 0.13 13.2 0.8 1 23 544 567 544 567 0.97

10 11 0.0067 0.48 11.4 1.7 1 23 576 598 576 598 0.95

11 11 1e-05 0.00073 20.3 0.3 1 23 604 627 604 627 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0085	0.61	11.1	0.4	1	23	314	336	314	336	0.97
2	11	0.054	3.9	8.6	1.0	1	23	343	365	343	365	0.93
3	11	0.00031	0.022	15.6	0.5	1	23	369	391	369	391	0.98
4	11	6.7	4.7e+02	2.0	3.1	3	23	400	420	399	420	0.92
5	11	9.7e-06	0.00069	20.3	0.7	1	23	425	448	425	448	0.97
6	11	2.9e-05	0.0021	18.8	0.6	1	23	454	476	454	476	0.98
7	11	0.00023	0.017	16.0	0.3	1	20	482	501	482	503	0.95
8	11	6.6e-05	0.0047	17.7	0.7	1	20	515	534	515	535	0.97
9	11	0.0018	0.13	13.2	0.8	1	23	544	567	544	567	0.97
10	11	0.0067	0.48	11.4	1.7	1	23	576	598	576	598	0.95
11	11	1e-05	0.00073	20.3	0.3	1	23	604	627	604	627	0.95

Sequence Information

Coding Sequence: ATGTCGTTAACTGTTGGTAAGAAGTCTTTAGATTTGGAATTTAAGGATAATGTTTGCAGAGGATGCTTAATTATCTCCCCAGTCGAACTATCGCCAATCGCCGATAGAACTATAAACATTTTTAAAGGCTTATCGAATATAACATTTAACTTAAATGATCTACGCAAAGAAAGAAGAAAATTGTTTAAAGATGACCAATCAATAAAAACCCGAAATTCCGACTTATTCAAAATTGAATTGGACAGTAAAAATAATGCTGGTCATACTCTATGTGATACAATTGATAGTGCTGTCAATAATTTCCATGATATACCCACTGATCCTCTCGAAGACTACAAGCCTATTCTGCAAATACTGCACGGCGGAAATGAATATCCTCAAGGTATTGATGAGGATTCAAAATTTCTAGATCATGCCTGCCCTGAAAGAGTCTACAATGAAGTATCAAATAATTTTTTTGTCATTGATTCAAATCCACTGGAAGATTCGTTTATTGATGATGACACCACTGAGGAAAATTCTTTCATTGAATTGACATCAATCAAAACAGAATGCGGCAATAATGTCGATCACAGTTGTATTCTTAATTCGAATGAAAAAAATAGCTTAGCAGGAATTAAAGAGGAATTGGATGATTGTATTGCCGCTACAAAAACAATGATACCAGTTAAAAGAAAAAGGAAATCTAATTCCCTATCGAATCTTAGTCAACACAATAAGAAAAAAAAAGTTGGTAATAAATCAAAACCTAATATTAAATCCGAAAACATATATCATCCAGATGAAAGTAGTGTAGATGGAAAGGTTGCAAAGAAAAAGAGTCGAGTTATCTATTGTTCATTGGACGAGACAAATGTTACTATTCTTAAATTGAGTATTGAAGAGCAGTTGCGAGAACTGCAGGAAGCAAGGACATTGAAACCCTATTTAGATTCTCCATATAAATGTGAATTATGCGCTAAAGGCTTCGTACACGAATTGAGTTTACAAGGTCACTTAGTTAGACATGACGAGTCATCCGGTTCATTTGTATGTGGCATCTGCCAGCAGAGGTACCCGTCAGATAGAAGTCTACGCAGTCATTCCCATGGCCACGAAGACAGATTTGAATGTAAGAAATGTGGTGCTGTATTTACTGGCCGGTCGAGAATGGCACGGCACTATGTCACACACACTGAAGCTCCTACACCTCCGGCTTGTAAGATTTGCGGCCTCATTAGCAAATCTTTGACGAGCCACTATCGCCATGTTAGACACCATAACGCCGTTCGGTTCAAATGCCCCCAATGCCCGAAGACTTTCAAAAACAAATTCACCATACAAGACCATATAGCACGTGCCCATACTGCCATCAAGCCATTTCAGTGTCCCGACTGTGAATCAACGTTTTCAACAAAGAACGGTCTTCGATCGCACGCCTTGAAGCATTCGGTTCAGAGAGACTTTTACTGTGTGGAGTGTGACATGAGCTTCAAGACTCAGATCGCCCTGACCCACCATTTGACAGCCACTAGACGACACGGGGATCCAGCCACTCTTAGATTCCAATGCGAAAAGTGTGACAAACGTTACGAGTCCGCCTCGAAGCTGAGATATCACATGGACTGTGCTCATCTATGTCTCTTCAAGTTTGAGTGCGATAAGTGTCCTGCCAAGTTTCAAATGGCTGGCTATTTGAAAAAACACAAGCAACGTCTGCATGAGGGGAGAGTTATGCCGAGAAATTTCACCTGCAGCTACTGCGGAAAAGGTTTCACGTGTGGAAAAGTTCTTCGAAATCACATTCTCATTCACACTGGTGAGAAGCCACACAGCTGCGAGATTTGCGGTCGCCCATTCCGACAGAAGGCTGCCTTGGACACTCACATAAAGCTGGTGCATCTGAACATCAAACGGAATGAGACTAAAAAAAAAGGCAGCCTAACCCGGACCAATAACTGCTGA
Protein Sequence: MSLTVGKKSLDLEFKDNVCRGCLIISPVELSPIADRTINIFKGLSNITFNLNDLRKERRKLFKDDQSIKTRNSDLFKIELDSKNNAGHTLCDTIDSAVNNFHDIPTDPLEDYKPILQILHGGNEYPQGIDEDSKFLDHACPERVYNEVSNNFFVIDSNPLEDSFIDDDTTEENSFIELTSIKTECGNNVDHSCILNSNEKNSLAGIKEELDDCIAATKTMIPVKRKRKSNSLSNLSQHNKKKKVGNKSKPNIKSENIYHPDESSVDGKVAKKKSRVIYCSLDETNVTILKLSIEEQLRELQEARTLKPYLDSPYKCELCAKGFVHELSLQGHLVRHDESSGSFVCGICQQRYPSDRSLRSHSHGHEDRFECKKCGAVFTGRSRMARHYVTHTEAPTPPACKICGLISKSLTSHYRHVRHHNAVRFKCPQCPKTFKNKFTIQDHIARAHTAIKPFQCPDCESTFSTKNGLRSHALKHSVQRDFYCVECDMSFKTQIALTHHLTATRRHGDPATLRFQCEKCDKRYESASKLRYHMDCAHLCLFKFECDKCPAKFQMAGYLKKHKQRLHEGRVMPRNFTCSYCGKGFTCGKVLRNHILIHTGEKPHSCEICGRPFRQKAALDTHIKLVHLNIKRNETKKKGSLTRTNNC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00799541;
90% Identity: -
80% Identity: -