Basic Information

Insect: Himalopsyche japonica
Gene Symbol: Znf516_1
Assembly: GCA_028555115.1
Location: JAHFWJ010000480.1:613106-614581[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00049 0.035 15.0 0.6 3 23 166 186 164 186 0.95

2 11 1.4e-06 9.8e-05 23.0 3.5 1 23 192 215 192 215 0.98

3 11 1.6e-05 0.0011 19.7 1.5 1 23 226 248 226 248 0.98

4 11 0.00092 0.066 14.1 1.0 1 23 254 276 254 276 0.97

5 11 1.9e-05 0.0014 19.4 1.6 1 23 282 304 282 304 0.98

6 11 0.00028 0.02 15.8 1.1 1 23 310 333 310 333 0.94

7 11 9.2e-06 0.00065 20.4 0.3 1 23 339 362 339 362 0.97

8 11 0.42 30 5.8 1.8 3 23 369 386 368 386 0.89

9 11 4.1e-06 0.00029 21.5 2.8 1 23 392 414 392 414 0.99

10 11 0.017 1.2 10.1 1.3 1 23 420 445 420 445 0.91

11 11 0.00015 0.011 16.6 2.6 1 23 451 474 451 474 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00049	0.035	15.0	0.6	3	23	166	186	164	186	0.95
2	11	1.4e-06	9.8e-05	23.0	3.5	1	23	192	215	192	215	0.98
3	11	1.6e-05	0.0011	19.7	1.5	1	23	226	248	226	248	0.98
4	11	0.00092	0.066	14.1	1.0	1	23	254	276	254	276	0.97
5	11	1.9e-05	0.0014	19.4	1.6	1	23	282	304	282	304	0.98
6	11	0.00028	0.02	15.8	1.1	1	23	310	333	310	333	0.94
7	11	9.2e-06	0.00065	20.4	0.3	1	23	339	362	339	362	0.97
8	11	0.42	30	5.8	1.8	3	23	369	386	368	386	0.89
9	11	4.1e-06	0.00029	21.5	2.8	1	23	392	414	392	414	0.99
10	11	0.017	1.2	10.1	1.3	1	23	420	445	420	445	0.91
11	11	0.00015	0.011	16.6	2.6	1	23	451	474	451	474	0.95

Sequence Information

Coding Sequence: ATGATGGATTATCACAATTCTACGTGCCGTATTTGTTTGCTGGAGAAAAATAATAGCGTGCCACTGTTCGATTCCGAAAATAAAGTCAATTATAGCGTCTTAATCAAAGAATACACGGGATTAAGTGTAGAACCAAACGAACAATTGCCCAATGTTATCTGCGACGTCTGCTCAACGGAACTGATGACAGTAGTTTCGTTCATATCCAAATGTCGTGTCACAAACGAACAGCTTCAGCTGTGCGTCGACCTCAAAATTCCATTTGATGAATTGCATTCTAACTCGGTCAAAGAGGAAAATCTACCTTTGGATATCGCCGTGAATATTAAGAAAGAGGAGCCTGACTTGACCTTGGACGATGACTTCATTGACAGTACCGAATTCGAATATAATAAACCAGTTAAGAAAAAGAAAAAATCAAAGAAGTTGACTATTAACTACATCGGTATTAAGCCCAAGAAAAAACAACAATCCTCTGAATCAGATATGCACTTATGTAAAATATGCGGGTTGATTGTGAGAAGTAAATCTGCGTTAATAGTTCATAATAGAAAACACACTGGTGAGCGACCATTCAAATGTCCTTACTGTGATAGATGTTTCTCTCAAGGAGGCACGCTCAAAGAACACATGAAGCGGCGACATTTACAAGACTCCTGTCCTATTgaaagatcgttcacctgcgatgcatgcggtaaacaatttattaaaaagagcgatatgcacattcacatgcgaatccacacaaaggaaaagccgtacgagtgctccttttgtttgcaaagatttgcccagagcggaacattaacccagcacaaaatgcttcacaccggcgagcgaccttattcatgtgaaatatgcggtaaaaagtttatagcccacaccacactaaaacgacacttgactgtacactcagatgaaagaaatttcaaatgtttagtatgcaacaaagccttaaaatctaggTTCGCGTTAAAAAAACATATACTTTTCTTGCACACTTCGGAGAAACCTTTTATTTGTCATGATTGCGGGGCCGGATTCGCCATGAAACCCAACTTAAAAGCTCACATAAAATCAAAACATTCGGAGGCGTCGGGATACTGCGAAATCTGCAAGAGAAAGTATCCTCATTTATCCGAACATATGCGTGTTCACACTGGAGAAACCCCTTTCCAGTGTCAATTGTGCAGTAAAAGATTCACACAGCAGCGGAGTCTCACCGGTCACATGAATAGGCACCAGAACGCTACAAAGTTTGCTTGTGCTGAGGCTAATTGTAACAAGGCTTTTTCTATGAAATGTAAGTTAGAGTATCACGTGATGAAATATCACAGTAATCACACGCCCCACATTTGTCAATATTGTTCAAAAGGCTATTACCGGATATCAGATTTAACAAAACACTTACGAAACAATCATTATAAAAAACATAATGCTGTTAATATCTCTACAGGTTCACATGCTTCTGAATAA
Protein Sequence: MMDYHNSTCRICLLEKNNSVPLFDSENKVNYSVLIKEYTGLSVEPNEQLPNVICDVCSTELMTVVSFISKCRVTNEQLQLCVDLKIPFDELHSNSVKEENLPLDIAVNIKKEEPDLTLDDDFIDSTEFEYNKPVKKKKKSKKLTINYIGIKPKKKQQSSESDMHLCKICGLIVRSKSALIVHNRKHTGERPFKCPYCDRCFSQGGTLKEHMKRRHLQDSCPIERSFTCDACGKQFIKKSDMHIHMRIHTKEKPYECSFCLQRFAQSGTLTQHKMLHTGERPYSCEICGKKFIAHTTLKRHLTVHSDERNFKCLVCNKALKSRFALKKHILFLHTSEKPFICHDCGAGFAMKPNLKAHIKSKHSEASGYCEICKRKYPHLSEHMRVHTGETPFQCQLCSKRFTQQRSLTGHMNRHQNATKFACAEANCNKAFSMKCKLEYHVMKYHSNHTPHICQYCSKGYYRISDLTKHLRNNHYKKHNAVNISTGSHASE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00801158;
90% Identity: iTF_00801158;
80% Identity: -