Hjap024069.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Himalopsyche japonica
Gene Symbol
-
Assembly
GCA_028555115.1
Location
JAHFWJ010000446.1:3267822-3294415[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0018 0.13 13.2 3.4 1 23 473 495 473 495 0.97
2 23 0.062 4.4 8.4 2.9 1 20 501 520 501 523 0.93
3 23 0.00013 0.0092 16.8 1.0 1 23 529 551 529 551 0.98
4 23 8.7e-05 0.0062 17.4 1.6 1 23 557 579 557 579 0.97
5 23 0.0001 0.0071 17.2 5.7 1 23 585 607 585 607 0.99
6 23 5.6e-05 0.004 18.0 4.8 1 23 613 635 613 635 0.97
7 23 1.7e-05 0.0012 19.6 7.1 1 23 710 732 710 732 0.97
8 23 1.7e-07 1.2e-05 25.9 2.7 1 23 738 760 738 760 0.98
9 23 0.00028 0.02 15.7 5.7 1 23 766 788 766 788 0.97
10 23 3.6e-05 0.0026 18.6 5.4 1 23 794 816 794 816 0.97
11 23 7.4e-07 5.3e-05 23.9 3.0 1 23 822 844 822 844 0.98
12 23 2.4e-05 0.0017 19.1 6.7 1 23 850 872 850 872 0.98
13 23 1.2e-05 0.00089 20.0 6.9 1 23 878 900 878 900 0.98
14 23 3.1e-07 2.2e-05 25.1 4.7 1 23 906 928 906 928 0.99
15 23 1.1e-06 8e-05 23.3 5.3 1 23 934 956 934 956 0.98
16 23 3.7e-07 2.7e-05 24.8 5.6 1 23 962 984 962 984 0.99
17 23 3.5e-07 2.5e-05 24.9 5.7 1 23 990 1012 990 1012 0.99
18 23 7.8e-07 5.6e-05 23.8 1.7 1 23 1018 1040 1018 1040 0.98
19 23 1.3e-05 0.00092 20.0 6.8 1 23 1046 1068 1046 1068 0.98
20 23 0.0002 0.014 16.2 6.9 1 23 1074 1097 1074 1097 0.95
21 23 8.9e-05 0.0063 17.3 0.2 1 23 1103 1125 1103 1125 0.97
22 23 0.037 2.6 9.1 4.3 1 23 1135 1157 1135 1157 0.99
23 23 7.1e-06 0.00051 20.8 2.3 1 23 1163 1185 1163 1185 0.98

Sequence Information

Coding Sequence
ATGAATAACGATCAGCACGGGATGAGCGGAGGCGGACCTCAGCCTTCCGGGAACGCTTCTGAGTCCCAGGCGCACAGATCTCAAAATCAACACCAGCTGACTCCTGCGACGGCAGCGACCGACCTCAGTGTGAATTCTGCTGTGAACGTCGCCCTGTCGAGTGTCGCCAAGTATTGGGTTTTTACCAATCTGTTTCCTGGCCCTCTGTCACAGGTGTCAGTGTACGGGCTTCCCGCGGGTACCACCCGAATGGAAAATGGAAAACCCGTGCAGGAGACTATATTGCAACAGCACTCTGGAATCCTAAACGGAGATCCGAGTCTTCTCTTGCAGCAACATACACAGGCCGCTCTGACGCAGGGTTCAGGGCAGAATGTCTCTCACTCTGGTGGAGGCTCCCCTCAGAGCATATCTAATGTTCCACTGCTCTCCAATGCAATGCATTTGGaggtggcagcggctctcgccggtcacggtcagcagggtgagacggttcagttgcagcagggcggcggccagcaacagcagcagcagcaacaacagcagcagtcttcgcagcaatcctctcaccagcaacttaatcaccaacagagtgggcatcaccacgcgcagcatcaCCAGGTAGCCAACCATCTCGGGTTGAATCACCTCTCGGCTACGAATCAGCACAACCAATCTCACGGAATGGTCAGCCAGCAGCTATTGAGCAATTCTGGAATGAGACAAGATCACACCAATCAGCAGATTCAGCTGACTGTGAGCGAAGACGGCCTGGTAACTGTCGTGGATCAAAACACCCAGAAGGTGATCGGGACGGCCACCGCTTCGGGTTTGAAAGATGACGGCCTCCTCCAGCAGGGCGGAGAAGTTCAATCCCTCACCGTTCACCAGCTGCAGCAGATCGTGGGGCAGCAGGTGCTCGATAGTGTTGTGAGAATAGAACAAGCGGCCGGTGAAGGCGCCAACATTCTCGTCACCCAGAATGCAGACGGCACGACTTCCATCGAGGCCGGAGGGCCCTCCGCATCTCACCACGGCGGCTCCTCTGTCAGCATCAAAGAGGAGAAATCGAAAATGATGGGCCACTTCAGTATGCCTGAGATAAAAGGAGAGGGAAAATTGGATCTCAAAAACCTCCAAGCGGGCCAGATGATGGATGTCCGGACTGCAGACGGATCGATTGTTAAAATATCAACAGGCTCCGTTGGCGGAACTACCGGGGAGCATGACATTCAGAACATGTACAAGGTGAATGTGGAGGATTTCTCACAGCTGCTCGCTTACCATGAAGTTTTTGGGAAACTGAACGCTGAGACGCCAGCACCTAAAGTGCAGTCAGAATCTGAAGCAGAAGCCGGGACGAGCAATGTCTCGGAAGCGGACAGCAGTCCACCCTCTGTTGGGTCTGCCGGTGCCCATTCTTGTGATCTCTGCAATAAAATCTTCCAATTTCGCTATCAACTCATCGTCCACAGGCGATATCACACTGAACGGAAGCCGTTTACCTGTCAAGTGTGCGGTCAGGCCTTCACCTGCGCCGCCGATCTCACCAGGCACGGCAAATGCCATCTCGGGGGATCCATGTTCACCTGCACCGTCTGCTTTCACGTCTTTGCTAATGCTGCCAGTCTGGAGAGACATGCTAAACGTCACGCACAAGACAAACCTTACGCCTGTACAGCCTGTCAGAAGAGCTTCGCTCGCAAGGAACATCTGGACACCCATGTCCGCAGTCACACAGGAGAGACTCCGTACAGGTGTCAGTTCTGTTCGaaaacctttacgaggaaggagcacatggtgaatcacgtcaggaagcacaccggggaaacgcctcatcgctgtgacatatgcaagaaatcttttactaggaaagaacactttgtcaaccatgtcatgtgGCACACAGCCGATCTGAGTGGCTATTGTCGTAAAAGTGTCTTTTCGAGGCCGCCGGCCGGTCGTCGATCCGACCGTTCGGACGGTAATCGTCAATTATTGAAGAAACCCAATACGATGGAACCCATAGACATAAAGCCGATGATATTCTTGGATGCGGGCGCCGCCGCCGGTGCCGGTGCCGGTGCCGATTTTCTGCTGATACAAAAGCCTAAAAGCGAGACCCCCCACCACTGTCAGGTGTGTGGCAAGAAGTACACCCGCAAGGAGCACCTCGCCAACCACATGCGCTCGCATACCAACGACACGCCTTTTCGATGCGAGATCTGCGGCAAGTCGTTTACCAGAAAAGAGCACTTCACCAATCACATCATGTGGCACACTGGTGAGACTCCCCATCGCTGTGATTTTTGCGCAAAGACATTCACCCGCAAAGAGCATCTGCTGAATCATGTTCGCCAGCACACTGGAGAATCGCCTCACCGCTGCGGATACTGCTCTAAGTCTTTCACGAGACGGGAACACCTCGTCAACCACGTCCGCCAGCACACCGGAGAGACTCCCTTCCGCTGCACGTATTGCCCGAAGGCATTCACCAGGAAGGATCACCTCGTGAACCACGTCCGACAGCACACCGGAGAGTCTCCTCACAAGTGCACTTACTGCGCCAAGTCCTTCACCCGCAAAGAGCATCTGACCAATCACGTCCGCCAGCACACCGGTGAGTCGCCTCACCGATGCGCCTACTGCTCCAAATCCTTCACAAGGAAAGAGCATCTCACCAATCACGTCAGGAAACACACTGGCGAGACTCCTTACACATGCAGCTACTGCTCCAAGGCCTTCAGCAGGAAAGAGCATCTGACCAACCACATCAGGAAACACACTGGGGAGACTCCTTACAGCTGCAGTTACTGCTCCAAGTCCTTCAGCAGGAAAGAGCACTTGAACAATCACGTCAGGAAACACACCGGCGAGACGCCGTACAGCTGCAGCTATTGCACCAAGTCGTTCAGCAGAAAGGAGCACCTCACCAACCACATCAGGAAGCACACTGGAGAGACTCCTTACAGCTGCACCTACTGCACCAAGTCGTTCAGCCGCAAAGAACATTTGAACAACCACATCAGGAAACACACGGGAGAGTACCCGTACGCGTGCAGCTACTGTGCCAAGGCTTTCACCAGGAAAGAGCACCTCACCAACCATATCAGGATACACACGGGGGAGTCGCCTCACCGGTGCGAGCTGTGCCAGAAGACGTTCACTCGGAAGGAGCATTTAACCAATCACCTGCGCCAGCACACCGGAGACACTCCACACTGCTGCAATGTGTGCAGCAAACCTTTCACCAGGAAAGAGCATCTCATCACACATATGAGTCGATCTCACACAGGAGAGCGACCGTTCGCTTGCGAGGAATGTGGAAAGTCTTTCCCATTGAAGGGGAACCTCATTTTCCACCAGCGGTCGCACAACAAAGGGGCTCAGGCCGCCCGACCCTACCGTTGTGATCTCTGTCCCAAAGATTTCATGTGCAAAGGGCATCTCGTTTCCCATCGACGTTCCCATACTGGTGAACGTCCTCACACGTGTCTGCAGTGCGGAAAAACTTTTGTGGAGAAAGGAAACATGGTCCGTCACATGCGCAAGCATGAGTTGGACGGCACCGCCGTCGCGGCCGCCACCGGAGTCGACCCCCTCAACCTGAACGCCGCCACGGAGAGCGAAGGAGCTACACCCGAAGGCGTCTCGGTGGACTCTTCGCTCCCCGCTCCGCCGCCGTCCTCTCTCCCTCAGCAGTCGGGTGGTATTCCGGCGGTCTCTGTTGGCGGACAGCAGCCCCCGCCTCTCATGCACATGACAGGACAGGTAATATCTGAGGCGGCAGGATCGGCAGCACAGAGAGCGGCGGGTGCCTTACATCATCCCGGACAGCAGCCCGCCATGCCGCATCATCCTGTTGTGGTCAACTATTAG
Protein Sequence
MNNDQHGMSGGGPQPSGNASESQAHRSQNQHQLTPATAATDLSVNSAVNVALSSVAKYWVFTNLFPGPLSQVSVYGLPAGTTRMENGKPVQETILQQHSGILNGDPSLLLQQHTQAALTQGSGQNVSHSGGGSPQSISNVPLLSNAMHLEVAAALAGHGQQGETVQLQQGGGQQQQQQQQQQQSSQQSSHQQLNHQQSGHHHAQHHQVANHLGLNHLSATNQHNQSHGMVSQQLLSNSGMRQDHTNQQIQLTVSEDGLVTVVDQNTQKVIGTATASGLKDDGLLQQGGEVQSLTVHQLQQIVGQQVLDSVVRIEQAAGEGANILVTQNADGTTSIEAGGPSASHHGGSSVSIKEEKSKMMGHFSMPEIKGEGKLDLKNLQAGQMMDVRTADGSIVKISTGSVGGTTGEHDIQNMYKVNVEDFSQLLAYHEVFGKLNAETPAPKVQSESEAEAGTSNVSEADSSPPSVGSAGAHSCDLCNKIFQFRYQLIVHRRYHTERKPFTCQVCGQAFTCAADLTRHGKCHLGGSMFTCTVCFHVFANAASLERHAKRHAQDKPYACTACQKSFARKEHLDTHVRSHTGETPYRCQFCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFVNHVMWHTADLSGYCRKSVFSRPPAGRRSDRSDGNRQLLKKPNTMEPIDIKPMIFLDAGAAAGAGAGADFLLIQKPKSETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRREHLVNHVRQHTGETPFRCTYCPKAFTRKDHLVNHVRQHTGESPHKCTYCAKSFTRKEHLTNHVRQHTGESPHRCAYCSKSFTRKEHLTNHVRKHTGETPYTCSYCSKAFSRKEHLTNHIRKHTGETPYSCSYCSKSFSRKEHLNNHVRKHTGETPYSCSYCTKSFSRKEHLTNHIRKHTGETPYSCTYCTKSFSRKEHLNNHIRKHTGEYPYACSYCAKAFTRKEHLTNHIRIHTGESPHRCELCQKTFTRKEHLTNHLRQHTGDTPHCCNVCSKPFTRKEHLITHMSRSHTGERPFACEECGKSFPLKGNLIFHQRSHNKGAQAARPYRCDLCPKDFMCKGHLVSHRRSHTGERPHTCLQCGKTFVEKGNMVRHMRKHELDGTAVAAATGVDPLNLNAATESEGATPEGVSVDSSLPAPPPSSLPQQSGGIPAVSVGGQQPPPLMHMTGQVISEAAGSAAQRAAGALHHPGQQPAMPHHPVVVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00801120;
90% Identity
-
80% Identity
-