Hjap001771.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- -
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000548.1:6202256-6204024[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 9.5e-07 0.0033 17.8 0.3 14 44 79 106 73 106 0.90 2 11 0.00056 2 9.0 0.9 14 43 110 136 107 137 0.89 3 11 0.0047 17 6.0 1.3 16 43 150 174 143 175 0.85 4 11 0.0016 5.7 7.5 2.1 9 43 178 207 170 208 0.81 5 11 0.37 1.3e+03 -0.0 0.0 19 43 214 235 211 236 0.81 6 11 1.7e-07 0.00059 20.2 1.5 12 43 268 296 260 297 0.91 7 11 0.025 86 3.7 1.7 15 43 315 340 308 341 0.82 8 11 2.5e-05 0.086 13.3 1.4 12 43 346 374 339 375 0.87 9 11 2.6 8.9e+03 -2.7 0.3 16 27 425 436 420 442 0.71 10 11 0.017 58 4.3 4.6 12 37 452 474 441 489 0.74 11 11 0.81 2.8e+03 -1.1 2.7 12 39 487 511 466 516 0.64
Sequence Information
- Coding Sequence
- ATGAAACCTGATAATCTATTACAAAGCGTTGTGTTTATAAGAGCTGAGATTAAAAGCGAATTTGAAGACGAGGAAGAGAGTCTCATTGATGAAAAGTCGTCTGACGATACAAAAAATACAGACATTGAAGTGGGAAAAAATTTCACCAAATCTAGTCACAACAAAAAATTAAATAAAGTAGAAAACATTGAAAATCAGTATGAGGTTTTTGGGTCTGATGTTACTGAAGATGCAAATGGCCAATGGACGTGTAACACGTGCGGATTAAAATATGTCAACCGGACACGCTTAATATATCACATGCGCAGGTCTCACAACGCTGCGACTAATTTCAAATATAAATGTCACAATTGTGGACTCGAATATGGTAGACTCGAGGGTCTTAAAAAACATATTAAACGCAAACATGATAATACCGATAAAGATCTCAATTCAATACCTAAGGTTAAATATAATTGCAAATACTGTGGATCTGTTTATGGATTCAAACAAAGTTTGTACCGTCACATGAAAGTTAAGCATTTACTGACTGACCCGACAGAAGTCATTCAAACTTGTAAATTTTGTCCTGCAACATTTACTCAGAGGCATAACCTTTTGTACCATGTTTCAAAGAAGCATTTTGTTGAGGAAGTGTTCTGTAATGATTGCGGATTAAAATTTCTCGGGAAAAAGGATTTGATTGAACATATTGTTATAAAACATGAAAAAGTAAATAGTAATTCAGAAATCAACTCAACTGAACGGTTAAATAATAAAATCGAAAGCGAAAGTACAGTAAAGTGGTGCAGAAGTGTTTTTCTTGATAATGGTAAAAAGCAATGCAAATTCTGTGATCAGATCCTTTCCAACACCAATAGACTGAAATATCACATTCGAACTAAACATTTTGATCAATATGTGAAGCTTAAACAGGAGATAGATGATATTCAATCGGCAATTAAAAAATTTCATTGTGTCGTATGCGGCCAAAAGTACAAAAATTCCGTCACATTGCGATTTCATGTAAAGATTAAACATAGTGGCAATAAAATCGTTGATAATAAGTCGTTTACTTGTGAATTCTGTGGAAATTTCTTTACCTCTCGTACAAGTCTTGTGTATCATTTAAAACGAAAGCATTATGAGGTTGAAGCTGTCGAAATAAAAGATAAATACGAACTTGTGCATGTTGAAGTTGAAAAAGAACGCCTAGAAAAAACTTTCAAACAAGCTGACGATGGTAATATCGTTGACGAGTTTATCAAAATTAGGAAGACATGTATAGAAGAGAGATATCAGTGTGATTTATGTAGTCATACATGCAAAAATTTACGATCTATTAAGCATCATAAAATAGCCAGGCACACAAATGAAAATGAAAACGTAATTAAATGCTCGCATTGTAATTATGTGACAAAATTTAAACAGTATTTACAGAAACATATATCTGTCAAGCATTCAGATTCAAACGCAGCTAAAAATCATGCGACATATGTTTGTGAAGTGTGCGGTTACAAAACCCAACTGAAGTACCGATTCAGTAGACATTTGGATACTCACCGCAAAGCTAAAGTTAATGTGTGA
- Protein Sequence
- MKPDNLLQSVVFIRAEIKSEFEDEEESLIDEKSSDDTKNTDIEVGKNFTKSSHNKKLNKVENIENQYEVFGSDVTEDANGQWTCNTCGLKYVNRTRLIYHMRRSHNAATNFKYKCHNCGLEYGRLEGLKKHIKRKHDNTDKDLNSIPKVKYNCKYCGSVYGFKQSLYRHMKVKHLLTDPTEVIQTCKFCPATFTQRHNLLYHVSKKHFVEEVFCNDCGLKFLGKKDLIEHIVIKHEKVNSNSEINSTERLNNKIESESTVKWCRSVFLDNGKKQCKFCDQILSNTNRLKYHIRTKHFDQYVKLKQEIDDIQSAIKKFHCVVCGQKYKNSVTLRFHVKIKHSGNKIVDNKSFTCEFCGNFFTSRTSLVYHLKRKHYEVEAVEIKDKYELVHVEVEKERLEKTFKQADDGNIVDEFIKIRKTCIEERYQCDLCSHTCKNLRSIKHHKIARHTNENENVIKCSHCNYVTKFKQYLQKHISVKHSDSNAAKNHATYVCEVCGYKTQLKYRFSRHLDTHRKAKVNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800512;
- 90% Identity
- iTF_00800512;
- 80% Identity
- iTF_00800512;