Hjap004915.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- RCOR3
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000657.1:1442084-1461253[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-09 1.5e-06 28.6 0.0 3 46 133 176 131 176 0.97 2 2 1e-12 1.2e-09 38.5 0.0 3 46 406 449 405 449 0.98
Sequence Information
- Coding Sequence
- ATGGTATTAGCTGAAAGAAATAATGACGGCGTTCGCAATGGTCGGAGGTCTAGGGGGCCAAGCCCCAACGGGCACGGAAGTCCCGAATCGAGCACAGATGATGAAAATGTAGTACCCTTTCCAGCTGAGAAGATCCGAGTAGGGCGAGACTATCAGGCCATTTGCCCCGAGCTCGAATCGGCTGAGACGCGGAAACCGGATCTTTTAGCCGAACGAGCACTTCTTGTCTGGTCGCCCACATTGGACATTTCCGACACTAAACTGGACGAATACATCACAGTCTCAAAAGAAAAATATGGCTACAATGGAGAGCAGGCATTGGGGATGTTATTTTGGCACAAACACGACCTGGAGAGAGCTGTTCAAGATCTGGCCAATTTTACGCCTTTCCCTGACGAGTGGACCGTCGAAGACAAAGTTTTATTCGAGCAGGCTTTTCAGTTTCACGGGAAAAGTTTTCATCGAATACGACAAATGTTACCTGACAAATCAATTGCATCACTGGTAAAATACTACTACTCATGGAAAAAAACGCGAGCACGGAGCTCTGCAATGGACCGAGCGGCGCACGTTCGAAGAGAAGGTTCACCCGACCGTGCTTCAGACAGAGCATCCGACGATCGAGAATCAGATGCAGAGGAAAAGAAGTGGACGATTCACCGAGGCATCCGCCGCGGGTCGGGCTCTCCGCCGCCTTCTGCGCACACTCCGCGCCACAGCCCCGCCGACGCCGCGCTCCCGCAGGTTGGCCAAGAGGGCGTCGTTGGGCGGTGTACTGGGTGCGGTATCTATTGCAACAAAACAACCGTCTACAACTCGCACAAACTTTGCAACGCCTGCCACACACACGCCAGACGTACGGGCAGCATGCGGCCGGTGTGCGGGCCCGTATCGCGTCGCGGCGGACCAAAGCAGGGTCGGTTCAAGCACAAGTTACCTAGAGGGATATACATCAATTATGACGACCTGGTCGCCATGGCTACCAGTCCCGAATCGGCATCGGCCAGCCCTCAGAACGCTGCGGCCGCCAACCAGCCACACGGCCAGCACACCATCAACCCGGGAGACTTCATGCTCAAAGCGATGGATCGCGAGATTGTGTCGCTCAAGAGACAAGTTCAGAACAATAAACAACAAATTAGCTCTCTGAAAAGAAAAACATCTGAAAGCATCGATGATCTGAGACCAGGAGAGGTCAACTCTAAACTAAATGCTCGGTGGACTAACGACGAGTTACTACTGGCCGTGCAGGGCGTTAGGAAATATGGCAAGGACTTCCAAGCGATTGCCGAGACTATTGGCACGAAAACAGAATCGCATGTGCGAACATTCTGGGCCACGTACCGCCGTCGTTACAATTTGGATTCTGTTTTGAAAGAGTGGGAGGCCGAAAAAGGCGGAGCTGCATCTTCTTCTTCAGTGCAACCTCTCTCTCCATCCAATTCAGCATCTGCTACAGATGCCACACCTTCTCACGACATCGGCAATGGAAATGGAAATGGTACTGCTGCTATGGACGAAAGTGCTGATGCTTCAGCAAATAATACAAACGGCTCCGGAGGACCTATCGGAACGAGTTCTACACCTCTCCCTGTGAAGGATGATAAGATGGAAGTTGACAGTGAAGGATGTGCGTTGGGATCCATCGCCGAACAGGGCGGAGCGCCTACGACTCCTTCCAAGCCTCAGACTAAATCTGCCAAATGA
- Protein Sequence
- MVLAERNNDGVRNGRRSRGPSPNGHGSPESSTDDENVVPFPAEKIRVGRDYQAICPELESAETRKPDLLAERALLVWSPTLDISDTKLDEYITVSKEKYGYNGEQALGMLFWHKHDLERAVQDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKSIASLVKYYYSWKKTRARSSAMDRAAHVRREGSPDRASDRASDDRESDAEEKKWTIHRGIRRGSGSPPPSAHTPRHSPADAALPQVGQEGVVGRCTGCGIYCNKTTVYNSHKLCNACHTHARRTGSMRPVCGPVSRRGGPKQGRFKHKLPRGIYINYDDLVAMATSPESASASPQNAAAANQPHGQHTINPGDFMLKAMDREIVSLKRQVQNNKQQISSLKRKTSESIDDLRPGEVNSKLNARWTNDELLLAVQGVRKYGKDFQAIAETIGTKTESHVRTFWATYRRRYNLDSVLKEWEAEKGGAASSSSVQPLSPSNSASATDATPSHDIGNGNGNGTAAMDESADASANNTNGSGGPIGTSSTPLPVKDDKMEVDSEGCALGSIAEQGGAPTTPSKPQTKSAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00799205;
- 90% Identity
- iTF_00799205;
- 80% Identity
- -