Hjap001432.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- -
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000687.1:23373-29183[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.6e-14 3.2e-11 43.2 0.1 2 35 207 241 206 248 0.93
Sequence Information
- Coding Sequence
- ATGGAAGATTTTCAGGGAGCTAATTACAAGAGCGTTATCAAAATTGAGAAAATAGACGAAATAAATATCGTAGAATACGATATCAAAGAGGAAATATCGAATGGGGCTTGTCGAGGTTGCCTCAGTATAAATAACCTCAAGAGCTTGTCTCAGACATACCACCGCGACGGCAGACCTGAAATATATTCGGAAATGCTATTATTCTGTTTCTCCATAAAGATGGAAGAATCCGGACTACGTCACATTTGCCCAATATGCATCGAAAAACTCAGAGATGCGGCAGAGTTTAGAAATCAACTAGAGACTGCCGCCAGTAGATTCCAAAGCTTTTCAGATGAGAAAGTGATGTCGAGCAATGATGATGTTGGATATATCATCGCAGGCGAGTCACCGGAATGCGATGATTTTCTTGACAATGAAGACAATTTAAACAGAGGTGATGCATCTGATGCTCATTTCAAACGAAGGACAAAGAAAAAATCTAAATCCTCTAAAATATCCCGGAAAAAAGACTTAACAAAGTGTGACGAGACAGAAGACTTTGAATTTATCGATAACATGCCGCTGTCTACAATTTCTGCAAATTCAGATTCTCGAGTTGAGAACGCTCCGTGGTCCAGGGAGACTATGAAAGCGGCAGTGGACACTGTCCTGTCTGGAGAAATGTCTGCGAGAAAGGCCGCCGCCGAATATGGCATACCGAGGAGCTCTCTGCTGCGGAAGGTTACTATGATGCGAGGTGGCAAAAAAGTCAACTTCTCCCCTGTGATTGGGCTCTTCACCAACACTTTCACCCGGGAGTATGAGAACAGATTGGTGCAGGAGATTGTGGAACTGTCAAAGAGGCGCGTGTCCCTGAACAGGAAAGAATTTCTACGGGTGGCCAGACGTCTGGCCGAATCTCTGCAGATCGATGACAGGTTCAAAATTAAAACCGAGTCAGCCGGGACGAGTTTCTATTATTATTTTATGAAACGCCACCCAGTTTTACGACAGAAGTCCCAAAAGCAACTTTTTAGTGGCAATATGAATGGCATCAAAACACTAGAAGAAGCCCTGCAATTTCACAAAGATGAAATGGGAGCCAAAAAGAAAGTCAGAAAGAAAGCTAATTTACCTGAAAAAATCAGCGACACCGATCTGCAATGCAAGATCTGCAATGAAGAGTTTCTGTGGAATAAAAATCTCAAAATGCATATGTCAGTACATTATCCTAATCACGTGTGCGAAACATGCGGGCACCTGTCTGCCACCCGCAAACAGCTGTCCCATCATGCCTATTCCCACCGGTTGGCCACTTTCTCCTGTCCGCTGTGTCCCGACTCCAAATTCAAGACGTCCAACGCCCTGCAGGCGCACACTAAATTAAAACACCTCGGTGAGAATGACCGCTACAAATGCCCTGTGTGCGGTGAACGCTTCACGAGTTTCACCCGCCGCCGAAAACATCTGATCGATGCCCACGATCATCAAGAGAGAAAGTACGCATGTAAGCTGTGCGAGAAGGAGTTTGAGGCGGCCGGCACCCTGTCTGTCCACGTCCGCATCGTCCACCTGAAAGAACGTAACCACCGCTGCCCGCAGTGCGAGCGGTCCTTCTTCTCCAAGAGATGCCTGGCCAACCACGCACTGTCGCACTCCGCTGAGAGAAATTTTCCGTGCGAGGTTTGCGGGAAGCGCTTTAAAAGAAAAACCGCTCTCTCAGAGCACGCGAAGATCCACGCCGGGGACAAGAGACACGTCTGTAATGTGTGCGGCAGGGCTTTCACTCAAGCGTGTACGCTTCGAGGCCACATGGCCGTGCATGAACGAGAGCTCAAACTTCACGAAAAGAATTCTATTCAGAACTGA
- Protein Sequence
- MEDFQGANYKSVIKIEKIDEINIVEYDIKEEISNGACRGCLSINNLKSLSQTYHRDGRPEIYSEMLLFCFSIKMEESGLRHICPICIEKLRDAAEFRNQLETAASRFQSFSDEKVMSSNDDVGYIIAGESPECDDFLDNEDNLNRGDASDAHFKRRTKKKSKSSKISRKKDLTKCDETEDFEFIDNMPLSTISANSDSRVENAPWSRETMKAAVDTVLSGEMSARKAAAEYGIPRSSLLRKVTMMRGGKKVNFSPVIGLFTNTFTREYENRLVQEIVELSKRRVSLNRKEFLRVARRLAESLQIDDRFKIKTESAGTSFYYYFMKRHPVLRQKSQKQLFSGNMNGIKTLEEALQFHKDEMGAKKKVRKKANLPEKISDTDLQCKICNEEFLWNKNLKMHMSVHYPNHVCETCGHLSATRKQLSHHAYSHRLATFSCPLCPDSKFKTSNALQAHTKLKHLGENDRYKCPVCGERFTSFTRRRKHLIDAHDHQERKYACKLCEKEFEAAGTLSVHVRIVHLKERNHRCPQCERSFFSKRCLANHALSHSAERNFPCEVCGKRFKRKTALSEHAKIHAGDKRHVCNVCGRAFTQACTLRGHMAVHERELKLHEKNSIQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800495;
- 90% Identity
- iTF_00799647;
- 80% Identity
- iTF_00800495;