Hjap010600.1
Basic Information
- Insect
- Himalopsyche japonica
- Gene Symbol
- kn
- Assembly
- GCA_028555115.1
- Location
- JAHFWJ010000748.1:155086-175598[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-57 1.2e-52 179.5 0.0 205 295 1 98 1 99 0.99 2 2 7.2e-16 1.7e-11 43.6 0.1 387 444 96 154 95 190 0.76
Sequence Information
- Coding Sequence
- ATGAGAAGGTTTCAAGTGGTGATATCAACGCAAGTAGTCGTCGATGGTCCACTATTAGCCATTTCAGACAATATGTTTGTCCACAACAACTCCAAGCATGGCAGACGAGCAAAGAGATTGGACCCTACGGAAGGCTTATATCCACCCTTACCAGTGGCGACACCATGCATCAAAGCCATTTCTCCAAGCGAAGGTTGGACGTCAGGTGGCTCAACTGTAATCATCGTAGGAGACAATTTCTTCGATGGTCTCCAAGTCGTCTTTGGCACCATGCTTGTTTGGAGCGAGGAAATAATTCTTAAGCGTGCAGCAGACCTAGCCGAAGCCTTATATTCTATGCCTCGAAACAACCAGCTTGGATTAGGAGCGCCAAGGTCTCCACCTGGTGGAGGAATGCCTTCAGGGTTCAATTCGTATGCTGGACAATTAGCAGTCAGTGTTCAAGATTCAGCGGCTGCTCAGTGGACCGATGGAATGGGAAGTATAGTATCGTCTCCATTCTCAACAATGAACCCCTTCGCTCTCCCTACCTGCTCGTCACAAGGCTATCCTGGAAGTCCATTGATCACTTCGACAAAGTAA
- Protein Sequence
- MRRFQVVISTQVVVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSEEIILKRAADLAEALYSMPRNNQLGLGAPRSPPGGGMPSGFNSYAGQLAVSVQDSAAAQWTDGMGSIVSSPFSTMNPFALPTCSSQGYPGSPLITSTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01061667;
- 90% Identity
- iTF_01061667;
- 80% Identity
- -