Basic Information

Gene Symbol
Kdm5
Assembly
GCA_028555115.1
Location
JAHFWJ010000489.1:48662-67303[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2e-23 9.9e-20 71.2 0.0 2 89 101 184 100 184 0.93
2 2 1.2 3.8e+03 -1.2 0.0 40 65 1338 1364 1318 1378 0.66

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAGCCAGTGTAGAAGTGAATATGGGGGATAGCGCGTCCCCACTAAAACAAGATATATTTGTGTTTACCGTACCACCCGAAGCACCTGTATTCACTCCAACCCCAGAAGAATTCTTGGATCCTCTGGCGTACATCAATAAAATTAGGCCAATCGCTGAGAAATCGGGAATATGCAAAATTAAACCTCCGCAAAATTGGCAGCCACCGTTTGCAGTGGACGTGGACCGGTTGAAGTTCACTCCTAGGATACAGCGTCTAAACGAGCTAGAGGCCATTACTAGAGTGAAGCTGAACTTTTTAGACCAGATTGTAAAATTCTGGGAGTTGCAAGGTTCTTTGCTGAAGATACCAACCGTTGAACGTAAACCTTTAGATATCTACGCATTACATAGAGTCGTCAAAGAAGCAGGCGGCTACGATGTGTGCACGACCGAAAGAAAATGGTCAAAGATTGCAGTGCGCATGGGTCACCCACAAGGAAAAGGTGTCGGCACAATTCTCAAGAACCACTACGAGAGAATTCTGTTTCCTTATGATCTCTTTAAAAGTGCCGAAGCCTTGGAAGTGAAACTGGAAAAAGGAGAGATGACACCTGAAAAAGCAAATGTCGCCGTCGGATGCAAAGGGCGGGGCTCAGCTCAGAAGGGGTCTCCTCAACCGCAACCTGATGTTAAGCCTCCCACAAGACGATGGAAAAAACATAATAGCGAACCTGAATTAGAGCATGAAGGAAGTCAAACGGAGGGATGCATGGGAGCTGAGGGAGGAGACAGAAAGAAAGACCTTCGCAGAACCACGTCTGCGGCGGCTAAAACACCAGAAGTCGATGATAAAAAGAGTATTCTCCGCGAGTCTCCTAGTAAACGTCGATTGGGGGCAGTAAGCATGGCATCTTGTCCGGGTAGCTTGCGAGCGCCTCGAATTCCTCCCAATCCTGCTCCGTCACTTCAAGACAAGAGACAAGTTAGCATGACCGTCAACGTTGTTCCAGCTGCACCCGACACTAGGGATGGAGCTGTGGATCCTTTGGCTAAATACATCTGTCATAATTGTGGACGGGGTGATATCGAAGAACAGATGCTGCTGTGTGACGGATGCGATGATTCTTATCACACCTTCTGCCTTATGCCTCCGCTTGGAGATATTCCCAAAGGAGACTGGAGGTGTCCACCATGTATAACGCAAGAGGTGTCAAAACCCACCGAAGCCTTTGGCTTTGAACAGGCCCAGAGAGAATATTCCCTTCAGCAGTTCGGAGAGATGGCCGATCAGTTCAAATCGGAGTACTTCAACATGCCTGTACATTTGGTGCCAACGCAAACAGTTGAAAAGGAATTTTGGAGGATCGTTTCCTCTATAGATGAAGACGTAACTGTAGAATACGGCGCTGACCTTCATTCGATGGATCACGGATCAGGTTTCCCCACCAAATCGAGTAAACACCTATATGCCGGCGATCAGGAATATGCAGACTCCAGCTGGAATTTGAACAATCTACCCCTTTTGGAAGGGAGTGTCCTCGGGCATATCAACGCTGACATATCCGGGATGAAGGTACCTTGGATGTACGTTGGCATGTGCTTTGCTACGTTTTGCTGGCACAACGAGGACCATTGGAGCTACTCCATCAATTATATGCACTGGGGAGAACCGAAGACATGGTATGGAGTTCCTGGATCCAAAGCGGAGTTATTTGAGACGACCATGCGCTCTGCCGCTCCTGAACTTTTTCAGTGGCAACCCGACCTTCTGCATCAGCTCGTCACCATTATGAACCCGAACATTTTGATGCATGCTGGTGTTCCAGTCTACAGAACGGATCAAAATGCCGGAGAGTTTGTGATCACATTCCCGAGAGCGTACCATGCTGGTTTTAATCAGGGATATAACTTTGCCGAGGCTGTCAACTTTACACCTGCAGATTGGTTAAAGATAGGGCGCGAATGCATAGCGCATTATTCAAATCTGCGCCGGTTTTGTGTGTTCTCTCACGATGAATTGGTGTGCAAAATGTCTCTAGAAGCTGACTCGCTCGAAGCTACAGTGGCATTAGCCACATATCAGGATATGAGGACTATGCTCGGTCACGAGAGGAAGCTCAGAAAAGGGTTGCTGGACTGGGGTGTAACAGAAGCTGAAAGAGAGGCATTCGAACTTTTGCCCGATGACGAGAGGCAGTGTTCAATGTGTAAGACAACCTGCTTCCTTTCAGCTGTCACATGTCCGTGTACCGTACATCTTGTATGTCTACGGCATTACACTGATCTCTGTCAATGTCCGCCACATAAGCATAAACTGAGGTATCGTTATACTCTGGATGAACTTCCAATGATGTTAGAGAGGTTGAAAAGAAGATCAGAATCCTTTAAAGAATGGGCTGACGCAGTCGCCAACGCTCTTTCCCCGGACACTCCTAAGTCTTGTGATCTTGAAGGGCTCCGATCCCATTTGAAAAAATCTGTAGATCTCAAAATGCAAAAATCAGATTTAATCCGCGCTTTAGAAGTGGCAATCGAAGATGCGGATAAATGTGTGTCTGTAATACATCAACTGGATCTAAATAAGATGCGAACTAGGACACGTCACAGTGTGGACCTCAAATATCGGCTCACCGTAGAAGAACTTACAATGTTCTGTGAGGAGATTGACAACTTGGCGTGTGTGTTGCCTGAAGGTTCGGCTGTAAAGGAAGTGTTGCGTCAAACGTTGGAAATCGAGCGCACCGCCGATGCTCTTCTAGTCGGTGAGCCTGGCTCTCCGGGTGGACCCGCCAAAATTAGAGAGCTGGAAGCGTGTGCCGAGAAGGGAGCCGCTCTATGTATTCAACTTCCAAAATTACCGCGTATTGTAAACAGACTTAAGCAGGAAAAATTCTTAGAAGAAGTCAAGATTCACCGCGACGGATATGAACCGATAAGTATGGAAGTGATCAACCGGCTGCTAGAACAGGGACTCAAGATTCAACCGCATTGTAAATTAGAAGTACAGCTTGTCTACCTGCAGAAACTTAAACATCAGGTCGATGTTTGGGAAAAGAAAGCTCAGTTAGTCTTGGCTACGGAATCTGAAGAAAAAACCTTACAAGAGACAGAATCACTTTTGGCTGAAGCTGAGGAAATTGAAGCTTTATTACCCAGTAAACAGCAGCTCACTGTCGCTGTCAACCAGGCCAAAGATTGGCTTAAAAAGGTGGCTGACATGCAATCCAAAGACTGTTACCCTTACTTCAGCACATTAGAGGCAATCGTGAAAAAGGGATCAGGAATAGTGATCAATCTCTACGAGAAAGATATGTTGGTAAACGCTTTGGAGTCGGCCTGCCAGTGGAAAGATCGCACTGCAAAAACATTCTTCCGAAAAAACTGGCCGCACGGACTTATGGAGACTCTCAGCCCTCGCACCGACATCTTGTCTAACCGGCGACCGACAGCCGTAACCGGTCGCGCTTCAAACACCACAGCGCGAGGCAATTCATCACCCAGCACCAACACACCTGTCTCTTCGACACCGGAAGCGGACCATTTCATGAAAAACTTCAACGAGGAACGGACACCCACCCAGATCGTTGCCGCCTTCAAGTCTGCAGAAGATAGGGAGATTGCAAATATGAGAGAACTCCGAGCGAGAAATCTCAGAAAGGATATAAGAATACCTCAGCCTGGTGTCACTTACTGTCTCTGTCAGAAGAGGCAGTTTGGATTTATGACGCAGTGTGAGCTCTGCAAAGAGTGGTTTCATTCAAGTTGTGTCAATACTCGAACTTCAACGGGCGGTACATCACCACCACCCGCAGGATCGATATCACCTGACGCCGAAGCGCCCAACTCACCGACATCAAACACTCTCCAGCAGAACAATCCGTCAATCACGGCTCAAAGCCATTCCAACGCTTCGGCGTCCTCCAGGTTTCTTTGCCCGTCGTGCTTGAGAACCCGGAGACCGAGGTTGGAAATAATCCTAGGCCTGCTGGTGGCGCTCCAGAAGTTACCCGTCAGACTGGCCGAGGGGGAAGCGTTGCAGTGCCTGACGGAGAGAGCCATGGCCTGGCAAGATGTTGCCAGGTCATTGTTAGCTACCAGAGATGCAGCCAGAGCCATGGCGGCCTTAACACATGCCGACCACCTAGTCTCGCAGGCTGCCGCTCGAGAGAAGACAGAAAAGATAATATCATCAGAGCTACGAAAGGCTTCAAGGAATCCAGAACTCCAACACAGAGTTCACCAACTGAGTGCTGCCAGCGGTGTTGGCTCTCCGCCAGACTCCGATATTCACAACAGAAATAGCTCGGCAGCGGAGCATGCTTATTCAGCATCTCCTCAGACATTACCGCGCAGTCCTCCATTAGCAGCATCTTCAATTACCACCCCGACAAGGTTAAGACTATCTCCTCAACTGCTACATCGATTTGAAGACCTCATGATGGAAGGAGATCTGCTTGAAGTGTCGATGGTGGAAACAAATCATTTGTGGAGTGTTGTCCGTGCAGCACGCGGTGATGGTCGGTCACCGTGTGGGGTGTGGAACGAGCGCGGCAACGGTCGACCTGCAAATTCTGCCGTTGTCGGAAATGCTAATACTTCGAATACTACTGCCGCCCCGAAAAGACCTGGACAAGGACCGCTGCACAGACGACATATGAAGAGACCCAGACGGAATAAAGATGGATTGCATCCAGTCAAAGTGGTTAGCGTGAAACGATCTCGCAAATCTCCTCCACCCATTTTGAATTCAGGCGCAGCCACTCCGAGAAGAACCAATACTCCCGCACCTACTGCCACCAACTATCTAAACAGAAAGCAGGGAATGCAGGGAGTACCAGGAGGTGGCAGTCTAATGATGAAGAAGCATTATCTGGCAAAACAAGAACGTCGAAGACGCGGAATGGCTCCCAAAGCCCCGCTCTCATTGACGGCTCAAGGGAAGCCGTCAGTTCGTGGTCGACGAGGTCCTCACAAGTTAAAGAAGGAACGAGCAGCGAGCGCAGGAGGGGGAGCGGGAACAAGTGGGACCCCAGGAGTGGCTAGCGCGAGTGGTGAATCTGCCAATGAAGTTACAAGGAGCGGTGCAGGGCCGCAATCTCCAGTCTCTGAAGATACCAGTTCCGGCAACATGAGCTCAAATGATGACGAAGAAGACTGCGCAGCCCACACATGTCTTAGACCAACAGGCAAAGAAGTAGACTGGGTTCAATGTGATGGCGGTTGCGAAAAATGGTTCCATCTTCATTGTGTCGGTCTCGTTAAAAACTCTCTTAAAGATGATGAAGATTATTATTGTGAAGCGTGCTCGGGGGTTCCTGAAACTCCTCCGCGAATCAGGTCGCAATCTGTTCAGAACAAGACGGACCAGGCGCCCTCTAAAAGTTCTAAACACTCAGCGGCGGAACGACCGTCAGGCCCCACCCATCGATCTACTTCCCGAGACGGAGGCGGCCTCGTCTTGACTTGCCATGAAAAAATGGATAAAGATGATGATTCTGATGAAACGGCTTCCCCTGCCGATGCGGAGGTTCACGGATACCGACCGAAGAAAATGTCAAATGCTGATAAAAACAAGAGAAACTCCGACGGAAGGAGCGGCCCGGTCAACGGAGACTCGAATGGTGTCGCCTCCAAAGTTAAATCGGACACCGGCGGTTCGTCGAATGCTACCGTCCCCTCGCCCACCAAAAGGGATTTAGATGAAGATTGA
Protein Sequence
MGKCDEASVEVNMGDSASPLKQDIFVFTVPPEAPVFTPTPEEFLDPLAYINKIRPIAEKSGICKIKPPQNWQPPFAVDVDRLKFTPRIQRLNELEAITRVKLNFLDQIVKFWELQGSLLKIPTVERKPLDIYALHRVVKEAGGYDVCTTERKWSKIAVRMGHPQGKGVGTILKNHYERILFPYDLFKSAEALEVKLEKGEMTPEKANVAVGCKGRGSAQKGSPQPQPDVKPPTRRWKKHNSEPELEHEGSQTEGCMGAEGGDRKKDLRRTTSAAAKTPEVDDKKSILRESPSKRRLGAVSMASCPGSLRAPRIPPNPAPSLQDKRQVSMTVNVVPAAPDTRDGAVDPLAKYICHNCGRGDIEEQMLLCDGCDDSYHTFCLMPPLGDIPKGDWRCPPCITQEVSKPTEAFGFEQAQREYSLQQFGEMADQFKSEYFNMPVHLVPTQTVEKEFWRIVSSIDEDVTVEYGADLHSMDHGSGFPTKSSKHLYAGDQEYADSSWNLNNLPLLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYMHWGEPKTWYGVPGSKAELFETTMRSAAPELFQWQPDLLHQLVTIMNPNILMHAGVPVYRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKIGRECIAHYSNLRRFCVFSHDELVCKMSLEADSLEATVALATYQDMRTMLGHERKLRKGLLDWGVTEAEREAFELLPDDERQCSMCKTTCFLSAVTCPCTVHLVCLRHYTDLCQCPPHKHKLRYRYTLDELPMMLERLKRRSESFKEWADAVANALSPDTPKSCDLEGLRSHLKKSVDLKMQKSDLIRALEVAIEDADKCVSVIHQLDLNKMRTRTRHSVDLKYRLTVEELTMFCEEIDNLACVLPEGSAVKEVLRQTLEIERTADALLVGEPGSPGGPAKIRELEACAEKGAALCIQLPKLPRIVNRLKQEKFLEEVKIHRDGYEPISMEVINRLLEQGLKIQPHCKLEVQLVYLQKLKHQVDVWEKKAQLVLATESEEKTLQETESLLAEAEEIEALLPSKQQLTVAVNQAKDWLKKVADMQSKDCYPYFSTLEAIVKKGSGIVINLYEKDMLVNALESACQWKDRTAKTFFRKNWPHGLMETLSPRTDILSNRRPTAVTGRASNTTARGNSSPSTNTPVSSTPEADHFMKNFNEERTPTQIVAAFKSAEDREIANMRELRARNLRKDIRIPQPGVTYCLCQKRQFGFMTQCELCKEWFHSSCVNTRTSTGGTSPPPAGSISPDAEAPNSPTSNTLQQNNPSITAQSHSNASASSRFLCPSCLRTRRPRLEIILGLLVALQKLPVRLAEGEALQCLTERAMAWQDVARSLLATRDAARAMAALTHADHLVSQAAAREKTEKIISSELRKASRNPELQHRVHQLSAASGVGSPPDSDIHNRNSSAAEHAYSASPQTLPRSPPLAASSITTPTRLRLSPQLLHRFEDLMMEGDLLEVSMVETNHLWSVVRAARGDGRSPCGVWNERGNGRPANSAVVGNANTSNTTAAPKRPGQGPLHRRHMKRPRRNKDGLHPVKVVSVKRSRKSPPPILNSGAATPRRTNTPAPTATNYLNRKQGMQGVPGGGSLMMKKHYLAKQERRRRGMAPKAPLSLTAQGKPSVRGRRGPHKLKKERAASAGGGAGTSGTPGVASASGESANEVTRSGAGPQSPVSEDTSSGNMSSNDDEEDCAAHTCLRPTGKEVDWVQCDGGCEKWFHLHCVGLVKNSLKDDEDYYCEACSGVPETPPRIRSQSVQNKTDQAPSKSSKHSAAERPSGPTHRSTSRDGGGLVLTCHEKMDKDDDSDETASPADAEVHGYRPKKMSNADKNKRNSDGRSGPVNGDSNGVASKVKSDTGGSSNATVPSPTKRDLDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00799054;
90% Identity
iTF_00799054;
80% Identity
-