Basic Information

Gene Symbol
Arid4b
Assembly
GCA_028555115.1
Location
JAHFWJ010000663.1:471165-495168[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-29 4.5e-26 91.5 0.2 1 89 305 391 305 391 0.96

Sequence Information

Coding Sequence
ATGCAAGCTGATGATCCACCATTTTTACCTGTCGGTACAGATGTTAGTGCAAAATATAAAGGCGCTTTTTGTGAAGCAAAAATAAAAAAAGTTGTCAGGAATATAAAATGCAAGGTAAGCTTCAAGGGTACAGGAGTAGGATCAACTACAGTCACAGATGAAGCAATCAAAGGTACTTTACGTGTTGGAAATACTGTTGAGGTGAAACATGATCAGAAGAAGGAAATGACGGAAGCCATCATCACAAAAATTCAAGATTGTAGCCAGTATACTGTTGTATTTGATGATGGTGATATCACTACTCTTCGAAGGAGCGCGCTCTGTCTGAAAAGTGGCAGGCACTTTGCTGAGAGTGAAACCTTAGACCAACTGCCTCTTACTCATCCGGAACACTTCGGCAATCCTGTCATCGGCTCATCTGGGCGGCGGGGGCGCAGAACCAATAGGACTCAGTCAGATGACAGTGACAGTGAGACCTGTGACACGAGTGGGGGGTCGGCAGGAATGGGCGGACCGGGTGGCGTGACAGAACGTGAGCCCCACACTGGAAGGGTGGTGCTGGTGCAGTGCTCCACCACGGATAAAAAGAGAGCGCACCATTCCCATCAGTGGTTCCCCGGATTGGTGGTCGCTCCCAATGCTCAAGACACTGTCAAGATAAGGGTCAAGGATGACTACCTTGTCAGGTCATTCAAAGACAGCAGATATTACACCGTTCCTAAAAAGGAAGCCAGAGACTTTAAGCGTAACAACCCAAACATTGAGTTGACTGGCATGGAAGCAGCCATTGCTTTTTTGGACAAGGGGGTTTTGCCACCGCATTGGGACAAAGACACTCTCTTTGGGCAAGAGTCTCAATTGAATTCAGACGATGGTGATTCAGACGATAGTTCTGATGATGAACCGCGTGAAGAGAAAGATCACTTTGTTGCCCAGCTTTACAAATTCATGGATGACCGTGGAACGCCGCTCAACAGGCAGCCAACTATAGCCAATAAGGACATTGATCTGTATCGCTTGTTCAATGTCGTCCAAAAGCTGGGTGGTTATAACCGAGTGACAAATCAGAACCAATGGAAAAAGATTGCTGTGAGGTTAGGTTTCCAGCCTGCTACATCCAGTGTCACCAACCTATGCAAGCAGGCATACAAAAAGTTTCTACACAGCTTTGAAGACTTTTATCGAAAGTTAGGTGTGACTCTTGTGGCTCATCCTAGAGGAGGTCGGACGACCGGTCGCAGTCTCATCCGAGACAGGGACAAGATGCACAGCAGCTCCTCTCAGCAGTCGGCAAGCCCTTCCACTACCTCAGATGATAAGCCACCAGAGGCAATTTCTAAAGCTGCTGCAAATAAAGCCAAGGAAAAAGAAAAGGAAGCCGAAAGGGAATTGAAAGAGAAAGAAGCCAAGGAAAAAGAGTTGAGAGAAAAGGAAGCAGATGCATTAGAAAAAGAGTTAAAAATTGCAAAAGAAAAAGAACTTAAGGATAGAGAGAGGGAAGCTAAAGAAAAGGAAATCAAAGAGAGGGAAGCAAGAGAAAAAGAGGCAAAGGAGAAAGAAAGGGAACTGAAAGAAAAAGAGGCCAGAGAAAAAGAACAGAGAGATAAAGAAGCTAAGGAGGCAAAAGAAGCGAAGGAAGCAAAAGAAGCAAAAGAAGCAAAAGAAGCAAAAGAAGCTAAAGAAAAGGAATTGAAGGCGATCGAGAAAGAAAAAGAAGCTAAAATTAAAGCTAAGGAATTGAAAGAAGCAAAAGAAAAAGAACAGCGAGAAAAAGAAATTAAGGAAGCGAAAGAAGCAAAAGAAAGGGAAAAGGAATTAAAAGAAAAAGAAGCCAAGGAAAAGTTAGAGAAAAGGGAAAAAGAAGCAGCGAAGACTAAGAAGGAGGTAAAATCTAAAACAGTTGTCGTTAATAGTAGCGATGAAGAAGACAGTGGAGATAACCAGCCTTTAGTTCCGGTTTCCAGTAAACTGGAGAAAAATGAATCATCAACCATAGTTGAGAAGCCGGTTGAAAAGCTGAAATCTAGTGACACCCCCGGGAAGAGTGGGAAGTTATTTAAAAGTGCTTCGGGTACCATAGATGGAAAGAAAGCTGAGAAAGTAACCACAAAAAAGATTGCTCACCGGCGTAATTCCCTGCCCAGATGCAATGCTGCTCCTGGTAAATCAGAATCAACACCTATAAAAGCTGAGGCTCGTTGCAAATCTTCATCAAGCGATTCGTCGACTACAAACAAAAAGCAATCTCAGGACTCTGATAAAGTGAAGAAGAAGGAGGAAGACAAAGACAAGGACAAAGAACCATCGAGTGGGACAGTGACAGTCAAAAAAGCTGCATCGCTGAGTGATAAAAACGACAGCGACAGTAGTAGAGGAAGCAAAAATGGAAAAACCTCTTGGAAAAGAAATGCACCGAATGATTCTACTCCGCCGTCAACTCCTGGCAGTGCCATGTCGCAGATTCTTACATCCAAGAAACCCCGAAAGAGAAAGATAACTGAGCCTACAGATCCTGTCAATACTCAAGTTATAAAAGCGGAGGTTGGCGATAAATTAAAAGTTTACTATGGGCCTACTCACTCGGAATCGAAAGTGACATATGAAGCAAAGGTGATTGAAATTGACAAAACGGGGCCGGAGATCTCATTGAAGGTTCATTATACAGGCTGGAACACCAGGTACGACGAGTGGATTAAGCCGACCAGGATCGCCGATAATCTATCTCAGCATTCCAAGGGAAAACATAAAGACAAGGGCAGAAGAAACCCCCCCAATGCCGGGACGGGTCCTCCTTGCAGTCCGGGAGGAAAGAAAACGCGCACTTCAACGCTTCTCGCTTTCAACACTGCTTCCTCCTTTACAAATACTCCCAATATTCCTCCCAACAAGCCTCCCCATCCCCACACTCGCAATCGTAGTGGATCTAATAATATTATGGCGTCCGCTCATCCACCAACAGATGTTTCTGTTCCATCGGACTCGGACAGCGAATGTGAATCGGATTCCAGTGGACCGAGGCCACCGAAAAGATTAATGGAAGAAATTAAACCACCCCCTAAAGAAAAGTTAAGCCAATCCGATCCGGGTGTAACTCCCTTAGAGACTGTATTAGAAGCAGAAAAAGAAAAAATGATAAAAATATCTAAAATAAGTAGAAGTCCTCAAATAAAAAGGAGCCTCGAAGGATCTCACGGTAGAATCAAAAGAACACGACTCAAACAAGAAGACAGTGATACTCCAAGAGGAAGGGACTTCGACCTCAATGAGATAAGATCAGAATTAAAAGGATTAGAAAAAACTATAAAACTCCCTGTGGTTGAAAATATTAAACTTGAACAGGAATCTCTAAGTACAAAAGATGATTCGAATGTGGTAATAAAACTTGAAAAGACACCTGAAAAAGTGCCCGATGATATTTATGAATTTAAAGAACCGGAGCCTTTTGAGTTTGAAGCAAGGAAATCTGAGGAAAAAAAGAAAAGGTTGCCCACTCATAGAATATTCAACGAGCTGCCGCATCTCAAACTGAGCCCCGCCTCATCACCTGAAAGCACTAAATCGCCCGTACGTCGAGAGCCATCTCCGCCTAAGTCTCAATTTGACGTGGCCTTTGATGAACTCTGCCAATCGGAGAACTACCAACATCCCGATGATGCCGAACGAACTGTGGAGAAAGAGGGGCGAGCGCTGTGTTTGTTTGGTGACATGGCCGCTGACGACAGCGGTGACAGGCTTCTCATCTCTGAAGCTGAAGACTCCCAAGAACCTCTTTTTATTTTTAATCAGCAAGATATGTTCCCTGAAAAGCCATATCTACCCATCTTCAAGGGATTCACTCCTGCTAAAAATCAAGAAACATACTCCAAAAAAGATGCAAATAGCAAATTACGCGATACTGAAGATGATTTTACTAACAGTCCTCTGAAAGGTGAGCAGTCTTCTGACGAAGACCCTATTCATGCTGCGATACAAAGGGTCAACGCTCATCCGATGTCAGATGACAGCAATGACGGAGATCTACTCATTAAAACTCCTGCCACTCCCACACCTCCGACTGGTGGCCTGCTTTCAACTTTTTCCACCGATCCTGCTTCTCCTGAAGCTATCTCTCAGATATCGATGGCCGATGGTGAGCCTCAAGAGTCTGAAGATATTTCCCTGTCCAAAATTAAAATGGAGGCTGCCCAAACAGCCCCCAAAACCAAATTGGATTTGCCCACAGGAATGCCAATGAAGGAAGATTCAGTAATTGAAATCGCAAAGAAGGATGTGCCAAAACAGGAAATCCAAATCGAGAAGTTTTCTCCTGTGATAGCTGAAGATAGTGAATCGAATTTGGAATCTAAAAGTGAATTAGAAGCCGCTGCGCCTTTCGCTGATGTCATTTTGCCGGAACCTCCTGCAGGATTTTTGATTCACAAAGAGGTTCCCTCGATAGCGGATAAAGTGTTACGAGCTATAAGCTCCGCTAAGAGGGCCGCTACTCCTCCGTCTGCCAAGGAGACTTTAAAAAAAGGTTGTGATGCATCCAAGATGCCATCTGTGTCTTCGCCAAAAAGACAACCATCCAAAGGAGTGCTGAGTGGAGACAGTGATGATCTTGCGAGTTCTTGTGCATCCTTACTCGACACGGCATCGGCACTGCAGAGGGCCAGCAATGCTGAGGCTCTTTTGCAAATGTCACAAAAGATTGAGTTGTCCAAGGCTATTACTAAAGTTGACTTTCCAAAAAGTGAAATGCTGGCACTCATCGGTGATAGTGTTGCGTCAGTGAACATATCTTCTGAGACGGATGTTATACCTACTTTGGTCAAAAAAGATATATCCGAGCGTAGGAAGAGCACTGCCGAACCGGCGTTAGCAGCCAAGAGTAACAAAGTACTCAGCGAGACTATACAGAAGCTATCCAGTCAAATAAGCCAGCCCGCTCCGGCTATTCCGATAGCTGAATACCAGACCGATGATAGGAGCGACACTACAGACAGTGATGATTCCGATCGAAGACTGATCATTGATAAATTGAGTGAAGAAGAATCACAGAGTGGCATCAGTCTGTCGGAGAGCACTGCTTCACGTCCTCCCAAAAGCCATGCAGATAAATCTCAGCCTCGTTGGAGCGTGACAGATTCCCAGCAGGACATTGAAAATGACAAGTCTTGCACTGCCCCTGATTCATCAAACACTACCGGCAAAGATGTCTGCATTACCAAACAGCCGGAAGAAGACAGCAATATTTCTCTTCTTCTCTGTGAAGAAACTATCCCCGGAAGTCCGGCTCCGGAAAATTTAGGTGAAGGCGGGAAGAGTTCTTCTTCTAAACCTCGCTCCACTAGAAACTTGGAGATTCCTTTCGCATCTGCACCTAGTATTAGCCCCGATCAGGCTTCTAAAGAACCCATGTCTCTCAAAGATTTGCCAAGAGAACCTTCCAGGGATTGCCGGGATGTTGGTGTATTGAGAAACAACGAACGAGATTGTATTGGCGGCAATAATACTGCTGATACAGTTTTGGACAATACGCCACCTATCACCCCCGATAGCAGTTTAGATAATATGTCCCCCAATAGAGATCAACAGCTGTCTGACGGAGATATTCCTAGTGATTCGAAAATGCATGAGGAAGACAATAGGAAATCGGGACCTTCCAAAAAGATGAACGAAGTGGAGAAGAGTAATTCTGGTGTAAACATGAACCTCAGAAGTGGTGGAGAGAGTCCCGTTGGAATGTCGAGCGGAATGTCAATAGGCATACCTCGCAGAGGTCGACGTCCTCGAAGCTGTCGAGTGAGCGAGAGCGAAGATCTCTCCTCTCTTTCAGTTCCTGCTCTTCTTTACTCAGGATCTCATCCGCCTCTCAAGTATAATTTCTATGTAGATTTAGATCCGGGATTAGACGGTGCTTCCAGGATAGCTTTGTTGACGTCACGTCTCTCAGAATTACGGAAAGCCTACCACAATGTTAAGGCTGAATTGGCAACTATAGACAGGAGACGGAAGAAACTGAGAAGAAAAGAAAGAGAAGCTGTGAAAGCTGCGAAGGCGGCCTGCTCGTGA
Protein Sequence
MQADDPPFLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVSFKGTGVGSTTVTDEAIKGTLRVGNTVEVKHDQKKEMTEAIITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGSSGRRGRRTNRTQSDDSDSETCDTSGGSAGMGGPGGVTEREPHTGRVVLVQCSTTDKKRAHHSHQWFPGLVVAPNAQDTVKIRVKDDYLVRSFKDSRYYTVPKKEARDFKRNNPNIELTGMEAAIAFLDKGVLPPHWDKDTLFGQESQLNSDDGDSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRQPTIANKDIDLYRLFNVVQKLGGYNRVTNQNQWKKIAVRLGFQPATSSVTNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGGRTTGRSLIRDRDKMHSSSSQQSASPSTTSDDKPPEAISKAAANKAKEKEKEAERELKEKEAKEKELREKEADALEKELKIAKEKELKDREREAKEKEIKEREAREKEAKEKERELKEKEAREKEQRDKEAKEAKEAKEAKEAKEAKEAKEAKEKELKAIEKEKEAKIKAKELKEAKEKEQREKEIKEAKEAKEREKELKEKEAKEKLEKREKEAAKTKKEVKSKTVVVNSSDEEDSGDNQPLVPVSSKLEKNESSTIVEKPVEKLKSSDTPGKSGKLFKSASGTIDGKKAEKVTTKKIAHRRNSLPRCNAAPGKSESTPIKAEARCKSSSSDSSTTNKKQSQDSDKVKKKEEDKDKDKEPSSGTVTVKKAASLSDKNDSDSSRGSKNGKTSWKRNAPNDSTPPSTPGSAMSQILTSKKPRKRKITEPTDPVNTQVIKAEVGDKLKVYYGPTHSESKVTYEAKVIEIDKTGPEISLKVHYTGWNTRYDEWIKPTRIADNLSQHSKGKHKDKGRRNPPNAGTGPPCSPGGKKTRTSTLLAFNTASSFTNTPNIPPNKPPHPHTRNRSGSNNIMASAHPPTDVSVPSDSDSECESDSSGPRPPKRLMEEIKPPPKEKLSQSDPGVTPLETVLEAEKEKMIKISKISRSPQIKRSLEGSHGRIKRTRLKQEDSDTPRGRDFDLNEIRSELKGLEKTIKLPVVENIKLEQESLSTKDDSNVVIKLEKTPEKVPDDIYEFKEPEPFEFEARKSEEKKKRLPTHRIFNELPHLKLSPASSPESTKSPVRREPSPPKSQFDVAFDELCQSENYQHPDDAERTVEKEGRALCLFGDMAADDSGDRLLISEAEDSQEPLFIFNQQDMFPEKPYLPIFKGFTPAKNQETYSKKDANSKLRDTEDDFTNSPLKGEQSSDEDPIHAAIQRVNAHPMSDDSNDGDLLIKTPATPTPPTGGLLSTFSTDPASPEAISQISMADGEPQESEDISLSKIKMEAAQTAPKTKLDLPTGMPMKEDSVIEIAKKDVPKQEIQIEKFSPVIAEDSESNLESKSELEAAAPFADVILPEPPAGFLIHKEVPSIADKVLRAISSAKRAATPPSAKETLKKGCDASKMPSVSSPKRQPSKGVLSGDSDDLASSCASLLDTASALQRASNAEALLQMSQKIELSKAITKVDFPKSEMLALIGDSVASVNISSETDVIPTLVKKDISERRKSTAEPALAAKSNKVLSETIQKLSSQISQPAPAIPIAEYQTDDRSDTTDSDDSDRRLIIDKLSEEESQSGISLSESTASRPPKSHADKSQPRWSVTDSQQDIENDKSCTAPDSSNTTGKDVCITKQPEEDSNISLLLCEETIPGSPAPENLGEGGKSSSSKPRSTRNLEIPFASAPSISPDQASKEPMSLKDLPREPSRDCRDVGVLRNNERDCIGGNNTADTVLDNTPPITPDSSLDNMSPNRDQQLSDGDIPSDSKMHEEDNRKSGPSKKMNEVEKSNSGVNMNLRSGGESPVGMSSGMSIGIPRRGRRPRSCRVSESEDLSSLSVPALLYSGSHPPLKYNFYVDLDPGLDGASRIALLTSRLSELRKAYHNVKAELATIDRRRKKLRRKEREAVKAAKAACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00799052;
90% Identity
iTF_00799052;
80% Identity
-