Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.36 1.1e+03 -0.5 0.1 1 28 104 109 96 119 0.70

2 5 1.7e-17 5.2e-14 51.8 1.1 1 34 131 163 131 165 0.93

3 5 1e-12 3.2e-09 36.5 6.4 1 35 169 201 169 202 0.90

4 5 0.0049 15 5.5 1.1 1 27 250 275 250 278 0.88

5 5 0.00065 2 8.3 1.1 4 31 294 316 293 316 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.36	1.1e+03	-0.5	0.1	1	28	104	109	96	119	0.70
2	5	1.7e-17	5.2e-14	51.8	1.1	1	34	131	163	131	165	0.93
3	5	1e-12	3.2e-09	36.5	6.4	1	35	169	201	169	202	0.90
4	5	0.0049	15	5.5	1.1	1	27	250	275	250	278	0.88
5	5	0.00065	2	8.3	1.1	4	31	294	316	293	316	0.81

Coding Sequence: ATGTGGATTCAGGATATATTTGTCGATAACCAAGATGATAAATTTGAACTGACAACCATTGAAGAAGAAAAACTGGTAGGATTATCATATGCCTCGGCACCGGCTGAGATGACCACCAAATATCGAGTCAGGTTAGTTGCAGAAAAATATTCACAAGTATATCCATTCCGTGAGAACAACGTGAACATACAGAGAAGAAATATGAGGCCAAGAGACGGACGAGGAGCCGGTCCTCCGAGAGAAAGGCAGTGCATTCATAGAAGTGATAAATATATGCCAGCATTTTATAAGGATCGAACTGGCCAGTCCTGTAAGCACTGTAATTTGAACACTATACTGACCAGACGGACTGTAAGACGTCCGAGGCCACTAGAAGCCGATGAAAGGTGGTGCGTGAATTGTTTTACTAGAAGAACGCCCCATTGGAGGCGGAACGATGATGGCGATCAGCTTTGCAATGCCTGCGGTCTCTACTTCGTGATATATCGTgTGACTGGATCGGTGTGCGCCAACTGCGGTACGACAAGGACAACTAAGTGGAGGCATATCAGAAATCAAAGAGTTTGCAACCCATGCGGCCTCCACTTCAGAGTATATAATGTTAATCGTTCACCAGCCAAGAAGATGGAAAGTCCTCCAGTAAGATCAAGTTATGATGCTAATAAATTGAAAGCAAAACgttcGACGGAATCAGACGAAATGTCTGGACGAACCGGAACCGGGGAAGAAAAGACTGAGAATGAAAAATGCGTCGTCTGCAAATCGACAATAAGGACACCTTGGATACCCAACAATGACGATCTAAAGCTTTGCTACTCTTGCGGATGGGTCGTCGAATATGAAaCAAAAAGTAAACATCACGGAGAGTTCAAGATAACCTGTGGTACTAGAAAATCGCCTGAACACAATGGCGATAGGATTTGCAAAGGCTGCGGTCTCAGCTACAAATAA
Protein Sequence: MWIQDIFVDNQDDKFELTTIEEEKLVGLSYASAPAEMTTKYRVRLVAEKYSQVYPFRENNVNIQRRNMRPRDGRGAGPPRERQCIHRSDKYMPAFYKDRTGQSCKHCNLNTILTRRTVRRPRPLEADERWCVNCFTRRTPHWRRNDDGDQLCNACGLYFVIYRVTGSVCANCGTTRTTKWRHIRNQRVCNPCGLHFRVYNVNRSPAKKMESPPVRSSYDANKLKAKRSTESDEMSGRTGTGEEKTENEKCVVCKSTIRTPWIPNNDDLKLCYSCGWVVEYETKSKHHGEFKITCGTRKSPEHNGDRICKGCGLSYK

Sequence clustering based on sequence similarity using MMseqs2