Basic Information

Insect: Himalopsyche anomala
Gene Symbol: -
Assembly: GCA_031772345.1
Location: CM062833.1:2213072-2229373[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.019 0.9 10.4 4.4 1 20 60 79 60 81 0.94

2 18 0.56 26 5.8 1.3 1 20 96 115 96 118 0.83

3 18 0.45 21 6.1 0.0 2 23 128 151 127 151 0.95

4 18 0.0095 0.45 11.3 0.8 1 23 155 179 155 179 0.96

5 18 0.00033 0.016 15.9 1.9 1 23 184 206 184 206 0.97

6 18 0.011 0.51 11.1 2.4 1 23 212 234 212 234 0.97

7 18 0.047 2.2 9.1 0.8 2 21 245 264 244 265 0.91

8 18 0.017 0.81 10.5 2.9 1 21 595 615 595 617 0.95

9 18 2.1 98 4.0 6.7 1 23 624 646 624 646 0.93

10 18 0.025 1.2 10.0 5.4 1 23 677 700 677 700 0.94

11 18 0.025 1.2 10.0 4.8 1 23 707 730 707 730 0.98

12 18 0.00044 0.021 15.5 0.3 1 23 745 768 745 768 0.96

13 18 0.00017 0.0082 16.8 0.1 1 23 783 805 783 805 0.97

14 18 0.11 5.4 7.9 1.0 1 23 810 833 810 833 0.95

15 18 0.21 10 7.1 3.9 1 21 839 859 839 861 0.90

16 18 0.23 11 7.0 6.1 1 23 867 889 867 889 0.98

17 18 3.1e-05 0.0015 19.2 0.5 1 23 895 917 895 917 0.98

18 18 0.0045 0.22 12.3 7.8 1 23 923 946 923 946 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.019	0.9	10.4	4.4	1	20	60	79	60	81	0.94
2	18	0.56	26	5.8	1.3	1	20	96	115	96	118	0.83
3	18	0.45	21	6.1	0.0	2	23	128	151	127	151	0.95
4	18	0.0095	0.45	11.3	0.8	1	23	155	179	155	179	0.96
5	18	0.00033	0.016	15.9	1.9	1	23	184	206	184	206	0.97
6	18	0.011	0.51	11.1	2.4	1	23	212	234	212	234	0.97
7	18	0.047	2.2	9.1	0.8	2	21	245	264	244	265	0.91
8	18	0.017	0.81	10.5	2.9	1	21	595	615	595	617	0.95
9	18	2.1	98	4.0	6.7	1	23	624	646	624	646	0.93
10	18	0.025	1.2	10.0	5.4	1	23	677	700	677	700	0.94
11	18	0.025	1.2	10.0	4.8	1	23	707	730	707	730	0.98
12	18	0.00044	0.021	15.5	0.3	1	23	745	768	745	768	0.96
13	18	0.00017	0.0082	16.8	0.1	1	23	783	805	783	805	0.97
14	18	0.11	5.4	7.9	1.0	1	23	810	833	810	833	0.95
15	18	0.21	10	7.1	3.9	1	21	839	859	839	861	0.90
16	18	0.23	11	7.0	6.1	1	23	867	889	867	889	0.98
17	18	3.1e-05	0.0015	19.2	0.5	1	23	895	917	895	917	0.98
18	18	0.0045	0.22	12.3	7.8	1	23	923	946	923	946	0.96

Sequence Information

Coding Sequence: ATGAcagaGACTGATATCAAAGCGGAACCATTCGATGACTTGTTTGATGCCCTTCAGGAGATAGAGGAAGAAGAATGGTTGGTGGATGATGAGCAGCTCATTGATGACCTTAAATTTGAGTTGGATGATGTGAAGCCTACGTTTAGGAAAAGGGGACGGAAACCGAAGCCAAAAGACTTTGAATGCGGGGAATGCCACCGTACCTATGAAGACCATGAGCATCTTCTGCGTCATAAATGCGGAGGAGGAGGTGGCCTCGGTGGGATGCGAGCAGCTCAAGGTGCTTTCCGATGTGCTCTCTGCGGACAAGCTTTCCCTACCAGAAAACGACTAAGTTTCCATAGAACATTCCATCAAGCGGAGCTTCTGGGGCGCTGTTTGAAATGTAAGGAGTGTCCCGCTGAAGAATTCATCTCCGAGGCTGACCTATATGACCATCTTAACAGTGAACACAatgtaaatttcaaatgccTCGAAGACGGCTGCGAGAAAGAGTTTCATTTGAGATCTTCACTAAGGGCGCACGGAAGGATTCACGGGAAACGAAGGTACCATTGTGAAGAGTGTGGAAAGCAGTTTTACGACATGCAAAATCTCAAGGAGCACAACATCACACATCTAAAGataaaaccattccagtgtCACATCTGCTTGAAGTTTGTGAATAGGAGGTCTCGTCTCCGAATGCATCTACTCGCTCATGAGTCTAGACCCTCGTCAAACTCCATACTCTCCTGCAAACATTGTCACACTGCGTTTAAAGATGCGCAAGATGCCGagGACCACGTAAAAAAATCAGAAGTTTGCCGGATGAGCATCGAATCAAAAGAAGTGAGCGGAATCGAGCTTTTGGCTGCCGCAGAGACAATCGAAGACGATGAAGAAAATCTACTACTAACGCTGGCCGACCAAGCTCTCAATAAGGAAACCGAGAGGCTCGGAGAAGAAATCGAACAGGCAAAGATTACAGAAGATACTCGAGAAGTTACTCTGCGGATTCAAGAAGACGCCGTCAATATCGGAGGAATATCAGAAGCCGTAGAAGAAGTCTTAAAAGAGGTTGAAATGATGGAAAAGGAGATGTCTGTTCAGGCCGCAGCAGAAGAGGAGCAAAatgaaaatgaagaaaatatcttAATGGCTGATAATGCCGAGGAAAATGTAGAAGATTCTCATGATAATTTAGCTGCTGAACAAGATGTTGACCAAGACATTAACATGGAATGTGCTCAAACTGAACATACGCTCGGTTCCCAAGATGAGCAGCTTaatgtagtatttaaaaaacacgaaGCGGTGATGGCACACGACGATAATGATTCAGGCATTGGGGCTCAAGAAAAACACACGGATGACGATCTATCGGGCGTTGTTGCGTTTTTAGGATTAGATCAACGGACATTCCAACCCATCAACATGGCCCCTGCCAAAATTGCGGAAGAAGTCAATCTTATCCTTAACCCCGTTGAAGGATCTGCTGAAATCTTGAAAAATACCAACACTAGTGGGGAAATTGAAGTTCCTAGTTTAACTGTAAATTCGACAGATGGCAGTGGCCCAGTTGAGACTCAGGAGACGTCAAAAGATAAATCGAAAGTAGACATGGCCGATATAAATGAGGCCAATTATGATGACGATTACGATCAGGAAGATGAAGATGATCCGGCAGAAGATTCGGAAACGTTTCATATAAAGAAAGAGATCAAGACTGAGAAAGAACTCTTATTGGAACTGACGCCGCTGGCGAGGATTTTCATCGAAGCTGTCACCGTTCAGATGGTCTATCGGTGTGAATACTGTGAAATGTTATTCAGCAAAAAGGATGCACTGAATTCACACAGAATGTGCCACGATAACGTAAATGACCCCTTCACCTGCAATATATGCCACGCCTCATTCTCTACATACGGAAGgTGTAAATCCCACAAGACGACCCACGGTTATTTCAAAGCGCACGACATGCAAGGCGAAATGGAAAAATCCACGCAAGGTGTCAGCGGCTACGAGGCGTTTCCCGTTGTTAAACATTTCTTATGTCAGatCTGCAATAAGACGTTCTTGCATTGGACCTACCTCCAAGTACACAGGAGGCATAAACATACTTCTTCCTTGCACCCCTTCACCTGCAAACTTTGCGGTGAACAGTTTATGGAGTGttggATGCTGAACCATCACCGGAGAAAGATGCACGCGGACAAATTAAACATGAGAACAAAGAGTGCCAATACGAGCTACAAATGTGCAGATTGTGACGAAGGCTTCAACATGCGGAAACAACTCGCCAAACACCGAGACGTGATGCACGGTGATAATTCTTTGCTGCAGTACAAACTTAAGGCTGgTCCTTTTGCTTGTACAGAATGTGAAAAAGTCTATCAAACCAAAGTTGGATTGGAAGGGCATATGAgagttCACAATGGCGGCGTGTACTTGTGCGCGTTATGCGGCAACGGTTTTGCCCACAGAGCTGGTCTAGATACGCATCAcaaGAGAGTTCATTTGCGTGAACAGCGTCATCCGTGCCCCATTTGCGGACAGTGCTTCTTCTCCACCGCGGAACTGGACGGCCACAAGCGATGTCATACTGGAGAGAAACCATTCCCCTGCAGTTACTGTCACATGTACTTCAGGACTAAAGGCCGAAGAAACGAACATCACAGGATACATACCGGAGAGAGACCTTATCCTTGCGACATTTGCGGTCTCGCCTTCCGGAGATCACACGCGATGAAGAATCACCGTCTCATTCACACAGGAGAGAGACAGCACAGATGTCCCCACTGCTCGAAACTCTTCCACGTCAGGTCTAATTTGAACACTCACATGAAACAAAAGCATCCTGGACAGTTCCTCGTTTTGGAAGTGGAAGGCGGCGCAGAAGTCAGAGCGGCACTGGAGGAGTCCTTAAAACAATTGTCAACCAAAGATGTCAAGGGTGATAAATTCCAGGACGATTCGGAAGAAGTCGACGCTCCCGACATGATTGTCGAAGAGAACGTCGTCATAGAAGAAGAGGACGAAAATTATACCTACGCTTATCATGCCGGACAAGTTGATGCTGAGAACAATGACAAAACCGACGGACAAGACGACGGGGAGGTTTATGTGAGTTACGAAAACGATGGTGAAGTTGTCGATAAAGATAATACCCCTTACGAGCAAGAAGACTGTGAGGAGATGTATGTTACTTACGAGCCAGATAAAGAACAAGGTGATGAATCCCGCATTGAGGGTATTACAAACGAACAAGAGATCAACGTTTACTATAAAAGAGATGAACGCATCGGAGAGAAAGACCGCGAATTGTACGCAGCAAACGTACACAAAGTATGCAACGACGGTATGTATATTGTAAGCGATGCCAATCAGACCGACGGATCGTATGTGAGGTTTGAAAAATCGCAAGACGCAGAAGCCATAGAAGGCGAATTTGCCAATTCCGTTATTTACGAAGGCGATGACACTGTCGATTATGAGGACGGAAACGCTGCAGGGTACGAAGACCGCAGTAACGAAATTCATTACGAGGTCCACGCGGTTGGCCAGGGAGATGACGGTAACGTAACGTACTCCGTTAAATACGTGGCCGACGATAGTCATCACAATGTTACCAACATCGCGGAAGAACACACCGACGATGCGATTTTAGATACATCTTACAATTTAggagaagaataa
Protein Sequence: MTETDIKAEPFDDLFDALQEIEEEEWLVDDEQLIDDLKFELDDVKPTFRKRGRKPKPKDFECGECHRTYEDHEHLLRHKCGGGGGLGGMRAAQGAFRCALCGQAFPTRKRLSFHRTFHQAELLGRCLKCKECPAEEFISEADLYDHLNSEHNVNFKCLEDGCEKEFHLRSSLRAHGRIHGKRRYHCEECGKQFYDMQNLKEHNITHLKIKPFQCHICLKFVNRRSRLRMHLLAHESRPSSNSILSCKHCHTAFKDAQDAEDHVKKSEVCRMSIESKEVSGIELLAAAETIEDDEENLLLTLADQALNKETERLGEEIEQAKITEDTREVTLRIQEDAVNIGGISEAVEEVLKEVEMMEKEMSVQAAAEEEQNENEENILMADNAEENVEDSHDNLAAEQDVDQDINMECAQTEHTLGSQDEQLNVVFKKHEAVMAHDDNDSGIGAQEKHTDDDLSGVVAFLGLDQRTFQPINMAPAKIAEEVNLILNPVEGSAEILKNTNTSGEIEVPSLTVNSTDGSGPVETQETSKDKSKVDMADINEANYDDDYDQEDEDDPAEDSETFHIKKEIKTEKELLLELTPLARIFIEAVTVQMVYRCEYCEMLFSKKDALNSHRMCHDNVNDPFTCNICHASFSTYGRCKSHKTTHGYFKAHDMQGEMEKSTQGVSGYEAFPVVKHFLCQICNKTFLHWTYLQVHRRHKHTSSLHPFTCKLCGEQFMECWMLNHHRRKMHADKLNMRTKSANTSYKCADCDEGFNMRKQLAKHRDVMHGDNSLLQYKLKAGPFACTECEKVYQTKVGLEGHMRVHNGGVYLCALCGNGFAHRAGLDTHHKRVHLREQRHPCPICGQCFFSTAELDGHKRCHTGEKPFPCSYCHMYFRTKGRRNEHHRIHTGERPYPCDICGLAFRRSHAMKNHRLIHTGERQHRCPHCSKLFHVRSNLNTHMKQKHPGQFLVLEVEGGAEVRAALEESLKQLSTKDVKGDKFQDDSEEVDAPDMIVEENVVIEEEDENYTYAYHAGQVDAENNDKTDGQDDGEVYVSYENDGEVVDKDNTPYEQEDCEEMYVTYEPDKEQGDESRIEGITNEQEINVYYKRDERIGEKDRELYAANVHKVCNDGMYIVSDANQTDGSYVRFEKSQDAEAIEGEFANSVIYEGDDTVDYEDGNAAGYEDRSNEIHYEVHAVGQGDDGNVTYSVKYVADDSHHNVTNIAEEHTDDAILDTSYNLGEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -