Basic Information

Insect: Himalopsyche anomala
Gene Symbol: Rreb1
Assembly: GCA_031772345.1
Location: CM062829.1:7826996-7838560[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 7.2e-06 0.00034 21.2 0.3 1 23 146 168 146 168 0.97

2 15 0.0001 0.0047 17.6 4.6 1 23 174 196 174 196 0.99

3 15 0.15 7.3 7.5 0.1 2 23 257 280 257 280 0.91

4 15 0.093 4.4 8.2 0.3 2 23 286 308 285 308 0.93

5 15 3.5 1.7e+02 3.2 1.3 1 19 357 375 357 377 0.79

6 15 0.16 7.4 7.5 0.1 1 23 525 547 525 547 0.97

7 15 0.00075 0.035 14.8 0.2 1 23 556 578 556 578 0.99

8 15 0.0014 0.068 13.9 2.0 1 23 584 607 584 607 0.97

9 15 0.0014 0.067 13.9 2.8 1 23 1041 1064 1041 1064 0.96

10 15 0.00076 0.036 14.8 2.1 2 23 1408 1429 1407 1429 0.97

11 15 0.049 2.3 9.1 5.3 1 23 1435 1458 1435 1458 0.97

12 15 0.0044 0.21 12.4 0.7 1 23 1506 1530 1506 1530 0.96

13 15 7.9 3.8e+02 2.1 0.4 1 23 1622 1645 1622 1645 0.89

14 15 0.024 1.1 10.1 0.4 2 23 1708 1729 1707 1729 0.94

15 15 0.026 1.3 9.9 5.9 1 23 1735 1757 1735 1757 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	7.2e-06	0.00034	21.2	0.3	1	23	146	168	146	168	0.97
2	15	0.0001	0.0047	17.6	4.6	1	23	174	196	174	196	0.99
3	15	0.15	7.3	7.5	0.1	2	23	257	280	257	280	0.91
4	15	0.093	4.4	8.2	0.3	2	23	286	308	285	308	0.93
5	15	3.5	1.7e+02	3.2	1.3	1	19	357	375	357	377	0.79
6	15	0.16	7.4	7.5	0.1	1	23	525	547	525	547	0.97
7	15	0.00075	0.035	14.8	0.2	1	23	556	578	556	578	0.99
8	15	0.0014	0.068	13.9	2.0	1	23	584	607	584	607	0.97
9	15	0.0014	0.067	13.9	2.8	1	23	1041	1064	1041	1064	0.96
10	15	0.00076	0.036	14.8	2.1	2	23	1408	1429	1407	1429	0.97
11	15	0.049	2.3	9.1	5.3	1	23	1435	1458	1435	1458	0.97
12	15	0.0044	0.21	12.4	0.7	1	23	1506	1530	1506	1530	0.96
13	15	7.9	3.8e+02	2.1	0.4	1	23	1622	1645	1622	1645	0.89
14	15	0.024	1.1	10.1	0.4	2	23	1708	1729	1707	1729	0.94
15	15	0.026	1.3	9.9	5.9	1	23	1735	1757	1735	1757	0.98

Sequence Information

Coding Sequence: ATGCAGGATATGTCGTGCCTCTTCAGTGACCATGCCATTACACAACAGAGACTCTTAAGATcagAGAGTCGTATGACAATGAATCAATCCAAACGTATCTCCTTAATGCCAGGACTCGAAGTGAGTCAGTTCAGTTTTCACGTGACGCACGGTGACCGGAGCAGCAACTATTGCTTCAACAGGATGCTCTCGCAGGAAATGTGCGGTCGCAGAAAATCCTATACCGCCCTCAGCAAGTCATCGAGCGACACACATGAACCGAAAACCAAAGTTATACCAAAGATCAAAAAACAAGAACCCGTCGATGAACATACAGCCAAAAACTTAGCACCTATCCCAAAAATAGTCTCAGAAGATAAAAGGATTTCTTCAGAACATAAGATTACATCGCAGGAAGAGAAAGATATTAAGTCTGAGAATTTGGATCAGGCAGATTTCGCTTGTAAAATTTGTAGCAAAGTCCTCAGTTCAAATTCCAGTCTTGAGAGGCATATGCTAGTTCACAGCGGTGATCGACCATTTCGCTGTAAAATGTGTGATCTCACATTCACCACCAACGGAAACATGCATAGACACTCCAGGACTCACAAGAAACCTCACGACCAGACCGATAGCGATGACTCCGACGACGGAGGACCCAGCTGTCTTCTCAGAACACCAGTTAGGAAACGTAGAATCGAATTTAACAATAACGATGATAAAGGTGGTGACGGTCCGGGAGGaaagaaaaaatcaaagaaCACTGATGAAGATAATATCAGTGGGGCACAGTGTCCCGTTTGTGGCAAGTCGGATTTTACATCATCCGATAGCCTCGATGCACACGTTGAAAAGGAACATCCTGAACATCGCGTTGAATGCAGTTCATGCAATTCCGTTTTCAAGGACCGTCGTGGTCTAAATTTGCACCGTTACATAGTACACCGTAATGATGCGAAGCCTGGACAAACTGAGAAAATATCAGGATTCAACGATTGCACTTTTGTTGATTTCTCAAGTGAAAAATTCCCTCAGATTGCGAGGTCCGTCTGTGAAAAGAGTATACATAAATCTGTTACCGACCAAAagttcaaatgtaaaaaatgttccAGAGAATTTCCCTGTGAGAGTGCTTTAGATATTCACTCTCAAGACTGCTCTATCAAGGAATCTGGTGATATTAAACGCGTAGTATCTGACGCGAGACGGTCTTCGAGCAGCGAAGAAGACGTACGCCGAGACGATTTCTTTGCAAACCTCGACCTACAAAACAGATCTCCTCATTTTGTTCCGATTGCGCACATTCCACTGCAAAATGGAATCAGAAAACCGAAAACTCACAGTGATTTCTTCGTGAATCGAGATGAACCCGTGAGACCTCCAATGGATAATTCCAAAGATTTGGCTGATATCCAGTCTATATTGTCAGTCACTTCAACATGTGGCCTGCTCGAAAGACTTGCCAGGAAAACTCACGACAATGAACGCGATGATATTTCTCAGTCTGAGCAAATGAACAGATCTGGTGATGACCATGAAGAGGTTCAAGACATGTTTGCTTCCGAGTTTCGCAAGATGAAACTGCGCGGTGAGTTCCCTTGCAGATTGTGTACGGCAATCTTCCCAAATTTGAGAGCTCTCAAAGGTCACAACAGAGTGCATTTAAGTGGGAATGGGCCGGGCCCTTACAGATGCAACATGTGCCCACAGTCTTCGTTGGATAAGGCAGCCCTCGTGAGACATATGAGAACTCACAACGGCGACCGTCCTTATGAGTGTGCTGTTTGCAATTACGCATTCACCACCAAAGCTAACTGTGAAAGACATCTTAGAAATCGTCACTCAAAAGTCACCAGAGAAGATGTCAAGAGATCGATCATTTACCATCCTTCAGAAGATCCAAATAACGATGATGTAAATTCCAAGCTCAATATTCCAAGGGAAGATATGAAGAGGACGTTGATTTTTAACACACCGGAAATGGAGCGCCATCACGATGATGCTGAGAGGATCACTCATTCCGACAGGCTAACTCCAGTATCGCACTATACACGCGAACCTGCCGTTATGCCTTTCAATGATCACGGAATTACCATTCCTCTGCCTCGTGAATTGTCCATAATGGTGCCACAGCCGAGAGAAATTATGCGCGCGCATTGTTCAATCGACCCCATTGTCAAGGCGCCCTCGGCACAAGAACCGGAACTCATTCAGCCGAGAATTAAAGTGAAGGGCTTCGGTCAATTGACGCAGATCCCAGACTTTGAAGAATCTGACATTGAGAGAGAAATGGACTCTGAAGATGAGGAAGAAGAGCGCTCTGAAATATCATATGTCGGAAAACCTCTCAATTACTCTACTGAATCACCGATGGACTTAAGCACCACAGATTGTCAAGATAACGTATTGGACTTGAGTAAAAAGAAGAATGACAAACCTGTTGATGAGCGTGTTTCTGATGCAGAACCTGAAGATTACATTCCTAAGACTATtgaattcaacaataatcacgCAGCCGCCGCtagcatatttgaaaaaactcaACAATTGGCGCTGCTGGCCCAACAGCAACTTTTAAAAGGTCAATACCCAAAGCTGGACAATTCCACCGGTTTTTACGCAAACCAGCTGTCGCAATTGTACAGAGGTGCTGCTCCGTTTCCTGGTCTCGCACTTCCACCGACGTTTCCTTTGAACCCGTATTTCTTACAGCATCCACATTATTTGGCTCAGCACGCTAATCCGCAAGAAATCGCTGAAATGAAGGAGAGAATCCAAAAAGAGATAATCCGCGGACTCCAAATGTCAGGAGGAGGCCTTGTCGGAATGGATCCtgctaatattttgaataatatggaACGGCTACAAGCGTTTCACCAACACAACTTGAACCGTATTGCAAGTCCAGATGTTCAAACTCCAACACCTGTTATAAAGCTTGAAGAAGACTTGAAGCCTCAATTGAGTATTAATACAGACACACCTACCACAATTCCATTTGCTAATCCTATGCTATCTTCACCGAAACTGCAAAAGAAAGAAGTGATCTCAGGACATAGTCCAAATTCTGTAAAAATGGTTATAAAGAATGGAGTTCTCATGCCAAAACAGAAACAACGCAGATATCGAACAGAAAGACCATTTTCTTGTGAGCATTGTTCTGCTAGATTCACTCTGAGATCCAACATGGAAAGACATATTAAACAACAGCATCCACATTATTGGTCTCAACGTCAAAGAACAAACATTGGAACTTTGCCAAGAAAGAATCCTGTTTCAATTATTCCACAAAACATAACTGTGCCATCGATAAATTATGAGAGCCGCTTAAACTTTATCAAGAACATTAACCCGAGTCCCAAATTGGCAGCAGTTTTGAGCAATGATGATAAAGAAACAATTGGTCACAATCCTCATGAGGGAGTACCAATGAATAAAGCATACAGCATGATCTCTGACCAGGTCAAATATGCAATTCTAGCTCAGCAGCTGAAATCTCAAAACCATCTGTACAACAATCAGAAAGATACGCGGAAAGATTCCGTTTCCGATGTTGTATCAGTCAATGGAGACATTGAAGAAGAAGATGAAGAGGATGCATTGGTCATCGATGAAGAAACAAGCGATGATAAAAGTCAAGTCTCTAAGGAACTCGatttaacaacaaataaatCGCCTCTTTCTGAACCGATAGACGTTGTCACCTTAACTGATTCCAATTCTTTAGCCAAAAAAGTGGCAGAGAAAATACTTATTGATGTTTCTGCGAAAACAAATGATATTTCCAAAGATTTCGACTGGAAAATAGCAGGTAGCTTAATCAGTAAAAATCTAAATGCTGTGAATTCAGTTATTCCGACATTTGTAACGCAAATAGGAAACCCTGAAAAGATTGATGATAAAAATTCACCTAAGAGTATTCCAAATCGTTCCGAAGAAGGTGATCTTGTTCCTGTATCAAGACTTTTGGATAATGCAGTTACCCAGCTTCCATTCGGGCAATATTTCAAGAATGATTTTTCATCATCAAACGGAGTCTCCACCGATGTCCAACGTAGAGATGCTGTGTTACAGACACCGGGAGAAGGTTCCGAAGAAGATGAAGAAGGGCTCGTTGCTTCATCGGGATCCACCAGCGAAGGAAACAATTCTGGCAGTGATGAAAATCGATCTGAATCAGAAACTACCGCTCAGATACCCCAGAAGAAGAAGTCGGCATACAGCCTCGCCCCGAATCGAGTCTCATGTCAATATTGCCACCGAAAATTCCCCTGGTCCAGTTCCCTTCGACGTCATATCCTGACACACACTGGACAAAAACCTTTCAAGTGCCCTCACTGCCCATTGCTTTTCACCACCAAATCTAACTGCGATCGTCACCTCTTACGGAAGCACGGAGGAGCTCAATCCAATCAGCAGCGCCTCCAACAACAAACACCATCACAAAACCCACCTCAAGATGTTGTACCGACGCCTCAGGTACCGCCTACTTCTACCAGCCAAGGTTTTATGATGAGAAACGTACCAGAGAGACCCTATAAATGCGCAGGTTGCCCGAGCAGCACTTTTTCAACTttgggaaatttaaaaaaacacatgtctTCGAAGCATGGAATTGAAGTTAGCGACAGAATTGATGGCGATGAAAGTCTACAAACTGAAGTCAATGGATACGGTTCAAGACCTGAAAGCCGTGATGGCCTGAATGCTGATCGCTGTGCAAGCTCTGACGATGAAAAGGCTTCCAAATGCGACGACACTGAAGTCATGGATGATAAAATGTCACCACCGCGTGACTGGGAAAGTCAGATCAACTCTTCAAAGTTCAGCCCATCCCGCCCACCAATCGATGGATTATCGAATACCCAAAATTGTGACCTGCCATTCAAGTGTCATCTTTGTGAAGGGTCCTACGGTGAGAGACAAGACGCCTTAGACCATATTAAGGCATCCCATAATTCTGAATACGAATTGCTGATGTCGAAAGGTGCCTTGGAATCTGGAGTCTCATTAGGGTTCGGTGAGGATTTGGGATCCTCCGCTCAGTCAGGGCATGGAAGCGAGGGAGGAGAAGAACCAGGAAGCGAAGAGAACATTGAACAATTGAGAGGGAAGTTCCCCGATTACGCCAATAGAAAGGTTGTTTGCGCATTTTGCATGCGTCGTTTCTGGTCAGCTGAAGACCTCCGCCGCCACATGCGCACCCACACCGGTGAGCGTCCATTCTCCTGCGATGTCTGCAGACGCCGCTTTACCCTGAAACACTCCATGCTCCGTCATCGAAAAAAGCACACTGGAGCATCATCATCTTCCGCCGCAGCCAACCGAGACCTCTCTGCCACAAGCGGGGACGAGGAAAACTGTTCCAAGAATTCAAACAGAACCTTTTCCCCGTCACCGTCAAACGTGCATCTATCATCGAACAACACGTCGACGCCGATTTCTACCAAACTTGAAAAGTATCATTTGGCCATCAATGATAAGTGTTTATCCCACAGCCCAGAAATCCCCAGCAACGTCAACAATAATAACTCTCCTCCTGGTCAAATTTACGAAGGAAAAGTTAAAATGCAGGACTTGAAGGAGATACAAGATAATATGGTGAACAGGAACCGATACTCGAGTGAAGACAACGAAGGAACAGCCGGGAACGACCTCATCGGAAACCTTTTGGGTATCAGTGACTTGGGTATAATCAACAAGCTGTTGTCGTCCCCAGATGAAGCTGCTAAATTGTTAGGGGTCAACGACAAGTGA
Protein Sequence: MQDMSCLFSDHAITQQRLLRSESRMTMNQSKRISLMPGLEVSQFSFHVTHGDRSSNYCFNRMLSQEMCGRRKSYTALSKSSSDTHEPKTKVIPKIKKQEPVDEHTAKNLAPIPKIVSEDKRISSEHKITSQEEKDIKSENLDQADFACKICSKVLSSNSSLERHMLVHSGDRPFRCKMCDLTFTTNGNMHRHSRTHKKPHDQTDSDDSDDGGPSCLLRTPVRKRRIEFNNNDDKGGDGPGGKKKSKNTDEDNISGAQCPVCGKSDFTSSDSLDAHVEKEHPEHRVECSSCNSVFKDRRGLNLHRYIVHRNDAKPGQTEKISGFNDCTFVDFSSEKFPQIARSVCEKSIHKSVTDQKFKCKKCSREFPCESALDIHSQDCSIKESGDIKRVVSDARRSSSSEEDVRRDDFFANLDLQNRSPHFVPIAHIPLQNGIRKPKTHSDFFVNRDEPVRPPMDNSKDLADIQSILSVTSTCGLLERLARKTHDNERDDISQSEQMNRSGDDHEEVQDMFASEFRKMKLRGEFPCRLCTAIFPNLRALKGHNRVHLSGNGPGPYRCNMCPQSSLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHSKVTREDVKRSIIYHPSEDPNNDDVNSKLNIPREDMKRTLIFNTPEMERHHDDAERITHSDRLTPVSHYTREPAVMPFNDHGITIPLPRELSIMVPQPREIMRAHCSIDPIVKAPSAQEPELIQPRIKVKGFGQLTQIPDFEESDIEREMDSEDEEEERSEISYVGKPLNYSTESPMDLSTTDCQDNVLDLSKKKNDKPVDERVSDAEPEDYIPKTIEFNNNHAAAASIFEKTQQLALLAQQQLLKGQYPKLDNSTGFYANQLSQLYRGAAPFPGLALPPTFPLNPYFLQHPHYLAQHANPQEIAEMKERIQKEIIRGLQMSGGGLVGMDPANILNNMERLQAFHQHNLNRIASPDVQTPTPVIKLEEDLKPQLSINTDTPTTIPFANPMLSSPKLQKKEVISGHSPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPHYWSQRQRTNIGTLPRKNPVSIIPQNITVPSINYESRLNFIKNINPSPKLAAVLSNDDKETIGHNPHEGVPMNKAYSMISDQVKYAILAQQLKSQNHLYNNQKDTRKDSVSDVVSVNGDIEEEDEEDALVIDEETSDDKSQVSKELDLTTNKSPLSEPIDVVTLTDSNSLAKKVAEKILIDVSAKTNDISKDFDWKIAGSLISKNLNAVNSVIPTFVTQIGNPEKIDDKNSPKSIPNRSEEGDLVPVSRLLDNAVTQLPFGQYFKNDFSSSNGVSTDVQRRDAVLQTPGEGSEEDEEGLVASSGSTSEGNNSGSDENRSESETTAQIPQKKKSAYSLAPNRVSCQYCHRKFPWSSSLRRHILTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGAQSNQQRLQQQTPSQNPPQDVVPTPQVPPTSTSQGFMMRNVPERPYKCAGCPSSTFSTLGNLKKHMSSKHGIEVSDRIDGDESLQTEVNGYGSRPESRDGLNADRCASSDDEKASKCDDTEVMDDKMSPPRDWESQINSSKFSPSRPPIDGLSNTQNCDLPFKCHLCEGSYGERQDALDHIKASHNSEYELLMSKGALESGVSLGFGEDLGSSAQSGHGSEGGEEPGSEENIEQLRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCRRRFTLKHSMLRHRKKHTGASSSSAAANRDLSATSGDEENCSKNSNRTFSPSPSNVHLSSNNTSTPISTKLEKYHLAINDKCLSHSPEIPSNVNNNNSPPGQIYEGKVKMQDLKEIQDNMVNRNRYSSEDNEGTAGNDLIGNLLGISDLGIINKLLSSPDEAAKLLGVNDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00801214;
90% Identity: iTF_00801214;
80% Identity: -