Basic Information

Insect: Himalopsyche anomala
Gene Symbol: -
Assembly: GCA_031772345.1
Location: CM062843.1:10781286-10786501[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.3 14 6.6 4.2 1 23 199 221 199 221 0.97

2 12 0.0079 0.38 11.6 3.4 1 23 301 323 301 323 0.97

3 12 0.0048 0.23 12.3 2.0 1 23 329 351 329 351 0.98

4 12 9.3e-06 0.00044 20.8 1.5 1 23 357 379 357 379 0.98

5 12 0.00057 0.027 15.2 2.3 1 23 385 407 385 407 0.97

6 12 0.27 13 6.8 6.8 1 20 413 432 413 435 0.95

7 12 0.00065 0.031 15.0 3.0 1 23 441 463 441 463 0.99

8 12 0.0016 0.074 13.8 1.6 1 23 469 491 469 491 0.98

9 12 3.7e-06 0.00017 22.1 0.5 1 23 497 519 497 519 0.96

10 12 0.0001 0.0049 17.5 4.2 1 23 525 547 525 547 0.97

11 12 0.00091 0.043 14.5 4.1 2 23 554 575 553 575 0.97

12 12 0.0015 0.073 13.8 1.0 1 23 581 603 581 603 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.3	14	6.6	4.2	1	23	199	221	199	221	0.97
2	12	0.0079	0.38	11.6	3.4	1	23	301	323	301	323	0.97
3	12	0.0048	0.23	12.3	2.0	1	23	329	351	329	351	0.98
4	12	9.3e-06	0.00044	20.8	1.5	1	23	357	379	357	379	0.98
5	12	0.00057	0.027	15.2	2.3	1	23	385	407	385	407	0.97
6	12	0.27	13	6.8	6.8	1	20	413	432	413	435	0.95
7	12	0.00065	0.031	15.0	3.0	1	23	441	463	441	463	0.99
8	12	0.0016	0.074	13.8	1.6	1	23	469	491	469	491	0.98
9	12	3.7e-06	0.00017	22.1	0.5	1	23	497	519	497	519	0.96
10	12	0.0001	0.0049	17.5	4.2	1	23	525	547	525	547	0.97
11	12	0.00091	0.043	14.5	4.1	2	23	554	575	553	575	0.97
12	12	0.0015	0.073	13.8	1.0	1	23	581	603	581	603	0.94

Sequence Information

Coding Sequence: ATGGATATTAAAATTGAACCGGCAGATGAATTACCTTCAGAGAGTGTATGCTTTAAcgttgaatttcaaaataaaccaagTATAGCATTGAATGAGGGTCACCCAAACGACAACACGCACAATGTCACTGTCAAGAAAGAAAAAATCGAAGAAAACTATTCTACAAAGGACGAATCACAATTGGATAGCCATTGGATAGACTTCAAAGACCTCTCCACTAAAGATGCCTGTCCtgtaaaagtagaaaaaatcgACGTCGACGAGTGTTCAAATTCTGAAAGAACCCAAAAAGAGaATCTCGTAACATCCCTACACCATAAAATCAAGCTGGAAGATCTGCGATCGAAGAATGACTTGGTTCCCAAACTAGACTGTCCCGTAAAGAAGGAGAACGGTGATATTGGAGAATGTTCGTATGCTGAATGGATCCCAGATCAGaTTCCTGACACCAACGCGGACTCGTTGACTGCCAGTTTTTATCCTCAAATGaattttccaaaaattcaatcgTCGTACGATAGCGTATGGAAAATTTCCGGACAACAACCAGTCGCCGTAATATCATTGGAGAATTGCGAATTTTACAAGCGCAATTTCGTATGCCGTGTATGTTTCCACATATGCAAATCGGCACAATCTCTTTCCAAGCACAAACTCATTCACGAAGATTTGAAACCGTTTGAAATTATACACATCGTACATGACGAATTCAACAGTTCTGAATTATGTAAGAGTTCCGAAGTGTGTACCAGTTCTGAATTATGCAACAGTTCTGAATTATGTAACATTTCCGAAGAAATACAGCCGTACAATTTCGTTGAATGCGACATGAAAGTACAAGCGGATTTTCAAGACGAATTCAACAGTTCTTTTACAAACGTGGGCGATAAAGAAAAACCGTATTTTTGCGACGAGTGTGATTTTAAATCTGCATACGCCCacaatttaaaaacgcataaaaaatcacacactggagaaaaaccgtTCAGTTGTGACCAGTGCGATTTCAAATCCGCGCGttcttttgatttaaaaacacacaaaatgtcacacactggagagaaACCTTTCGAGTGTCTTGAGTGTGGATCTAAATTCGCTAGGGCCACTCATTTAAAAAGACATCAGATCACTCACAACGGTCTAGAACGGTTCAATTGTGACCAATGCGATCTAAAATTCGTCAAACTGACAAAGCTGAGAAAGCATCGAAAGATTCACGTGGGAGAGAAGTCGTTTAAATGTCACGTTTGTGACTTTAAATCCGTTCATCTGTCAACACTAAAGACTCACCTGACGTGTCACACAACGGAGAAACCGTACACATGCAGTCAGTGTGATTTTAAATCGGCATACcgctacaatttaaaaacacatttaaaatcacACACCGGAGAGAAGCCATTTAATTGTGACATTTGTGACTTTAAGTCGGCGCGTTCGTTCGATCTGAAGATGCATAAGCGGTCGCACACTGGTGAGAAACCGTTTGAATGCGAGCAGTGCGGTTGGAAGTTCGCCAGGGCCACTCACCTGAAACGTCACGAGGCGATTCACGCCGCGGAGAAGCCGTTCGTTTGCCATGATTGCGACAGGAGATTCTTTCATTTGGACGGCCTGAAGAAACACCAGGGGTCGCACACGTGCGTGACGTCGCTTCAGTGTAAACACTGCGATTACAAAGCTGAACGCACCTTCGAATTGAAAAAACACCAAAGGACACACATTGATTACAAACCTTTTAAATGCGATGAGTGTCCGTCTGATTTCGAAAGAGCGATTCATTTGAAACGGCATAAGGTGTTACATGGACCACGACTTTCGTAA
Protein Sequence: MDIKIEPADELPSESVCFNVEFQNKPSIALNEGHPNDNTHNVTVKKEKIEENYSTKDESQLDSHWIDFKDLSTKDACPVKVEKIDVDECSNSERTQKENLVTSLHHKIKLEDLRSKNDLVPKLDCPVKKENGDIGECSYAEWIPDQIPDTNADSLTASFYPQMNFPKIQSSYDSVWKISGQQPVAVISLENCEFYKRNFVCRVCFHICKSAQSLSKHKLIHEDLKPFEIIHIVHDEFNSSELCKSSEVCTSSELCNSSELCNISEEIQPYNFVECDMKVQADFQDEFNSSFTNVGDKEKPYFCDECDFKSAYAHNLKTHKKSHTGEKPFSCDQCDFKSARSFDLKTHKMSHTGEKPFECLECGSKFARATHLKRHQITHNGLERFNCDQCDLKFVKLTKLRKHRKIHVGEKSFKCHVCDFKSVHLSTLKTHLTCHTTEKPYTCSQCDFKSAYRYNLKTHLKSHTGEKPFNCDICDFKSARSFDLKMHKRSHTGEKPFECEQCGWKFARATHLKRHEAIHAAEKPFVCHDCDRRFFHLDGLKKHQGSHTCVTSLQCKHCDYKAERTFELKKHQRTHIDYKPFKCDECPSDFERAIHLKRHKVLHGPRLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -