Basic Information

Insect: Himalopsyche anomala
Gene Symbol: -
Assembly: GCA_031772345.1
Location: CM062833.1:11078675-11103006[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.6 4.1e+02 2.0 1.0 10 23 478 492 468 492 0.84

2 18 0.25 12 6.9 4.1 1 20 672 691 672 693 0.93

3 18 3.3 1.6e+02 3.3 0.7 2 23 761 784 760 784 0.89

4 18 0.00069 0.033 14.9 1.1 3 23 792 814 790 814 0.94

5 18 0.017 0.8 10.6 1.4 1 23 820 842 820 842 0.94

6 18 0.0052 0.25 12.2 4.1 1 23 848 870 848 870 0.99

7 18 0.21 10 7.1 0.0 2 21 881 900 880 901 0.93

8 18 0.0035 0.17 12.7 1.4 1 20 993 1012 993 1015 0.95

9 18 4 1.9e+02 3.1 6.6 1 23 1022 1044 1022 1044 0.95

10 18 0.0052 0.25 12.1 1.8 1 23 1074 1097 1074 1097 0.94

11 18 0.67 32 5.5 0.1 1 23 1104 1127 1104 1127 0.96

12 18 0.0012 0.056 14.2 0.5 1 23 1149 1172 1149 1172 0.97

13 18 5.4e-05 0.0025 18.4 1.2 1 23 1188 1210 1188 1211 0.96

14 18 5e-05 0.0024 18.5 2.4 1 23 1220 1243 1220 1243 0.97

15 18 1.7e-05 0.00082 20.0 2.6 1 23 1249 1271 1249 1271 0.97

16 18 0.00014 0.0067 17.1 1.1 1 23 1277 1299 1277 1299 0.99

17 18 3e-05 0.0014 19.2 0.2 1 23 1305 1327 1305 1327 0.98

18 18 7.3e-05 0.0034 18.0 1.4 1 23 1333 1356 1333 1356 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.6	4.1e+02	2.0	1.0	10	23	478	492	468	492	0.84
2	18	0.25	12	6.9	4.1	1	20	672	691	672	693	0.93
3	18	3.3	1.6e+02	3.3	0.7	2	23	761	784	760	784	0.89
4	18	0.00069	0.033	14.9	1.1	3	23	792	814	790	814	0.94
5	18	0.017	0.8	10.6	1.4	1	23	820	842	820	842	0.94
6	18	0.0052	0.25	12.2	4.1	1	23	848	870	848	870	0.99
7	18	0.21	10	7.1	0.0	2	21	881	900	880	901	0.93
8	18	0.0035	0.17	12.7	1.4	1	20	993	1012	993	1015	0.95
9	18	4	1.9e+02	3.1	6.6	1	23	1022	1044	1022	1044	0.95
10	18	0.0052	0.25	12.1	1.8	1	23	1074	1097	1074	1097	0.94
11	18	0.67	32	5.5	0.1	1	23	1104	1127	1104	1127	0.96
12	18	0.0012	0.056	14.2	0.5	1	23	1149	1172	1149	1172	0.97
13	18	5.4e-05	0.0025	18.4	1.2	1	23	1188	1210	1188	1211	0.96
14	18	5e-05	0.0024	18.5	2.4	1	23	1220	1243	1220	1243	0.97
15	18	1.7e-05	0.00082	20.0	2.6	1	23	1249	1271	1249	1271	0.97
16	18	0.00014	0.0067	17.1	1.1	1	23	1277	1299	1277	1299	0.99
17	18	3e-05	0.0014	19.2	0.2	1	23	1305	1327	1305	1327	0.98
18	18	7.3e-05	0.0034	18.0	1.4	1	23	1333	1356	1333	1356	0.97

Sequence Information

Coding Sequence: atgacGCTCACACTTTATTTGGAAGATAACTATGGGAAAAGTACTTCTATTGCAGTTCAACCGGAAGACacttttcaagtatttttacaaaatgctaAATCGATCCTCGGATATGATGTTGATATATCAAGTATCACCGGTACCGAGCAGGTCTTACTTAATGACAACGTTTACCAGTTCcttataaaagctaaattaaatcTGCAAGAGCAAGAGATAAAGGAATCCTCGTCAGAACTAATCGCCGCAGGGGAAATAGAGTTACCGACGCAGGAAGAATCTGGTTTACTCGATGACGATATGCAGGaagatattatttacatattagaCGACAACACAAAAGAAAATACTTCCCGTCTTGGATTTGTTGATAGTTTTGCTCCAGGGACTAGTTCTGAATTCTTTTTAAGGAACAATATTGGGGATGATTCCGTTTCTTATATAGTGTATGAAAGCGAACAGCAAGACgagtgtatgtatattttaggCGATGAAGTGATCAATACGACACCGGAAGATGCTACGATTGTTGAATTGGAGAATACATTTGAACCATTGTTGAAtgaaatgagtattttaaagCCGATAAATAAGAATTCTATTATAGATTTTAATGTAAGAATCAATGAATCAAAAAATGCTGCATTATCCGATCCATCTGCAgtcaaaactttaaataataagcaattAGCTGGAATAATTAAGGACTCTTGTGcggataatattgaatttgagatagtgcaaacaaataaaacagaTGCAACACCGACAACTCTAACTAtccataaacaaaacattaataataatatatcaattaacaGTCAAACACTTTTGCAACATAACAGTAATGTGGCTACACCAAAGATAGTTGCAAATGTTCAAGAAAACTCTCAAAGCTTTTGCAcgttttgtaaaagaaaaataacaaatgaatttaGTAAGTCATACATTTTCGATAGTGATGACACACagttgaataaaatttttaataaaattgaaatcacGATTCCCAAGTTGATTTGTTTGTACTGCTTGAAAAGCGATTATGAAGTTTATGATCGCTTACCTAAAAAGTTGAACACCAATGATTTTTTGGTCATGCAGAATAAGCTGCAAAAGGTTTATAAGAAAAAAGCTGGAGGATCTCATGAAAAGAATATTGCAAAAGACAAGCGATTGTACACAACAGGTGGTGCTGTGAATGAAAAGGATTCAATTGATTCTTTTAATGGTGTAACAAAAAATCCACCGATCATTATCATTAGTGATATCAGAATTCCAAAGAAAGAGTGTCTGAACGTAGGCTATGTTTGCAGaatttgtgGACTGGATCTAAAAGAGCTTCGCTTAGCCATACCTCATTCAGTGACTCATATGacggaaataaaaaaacctgCAGTCTTCTCATGCATATTATGTACAAAAAGTGGTTATTCCCAATTTCAGGAGCTACGGCATCACATGCAATCCGAACACTCATTAATGAAGCAAAGAATGGTGCAACAAAATGCCAAAAAGACACCTAAATTAAATGCTATCGCACATAGGAAAACAAAGAGTGAAAGAATCTCAGATATATCAGTGAAAAATAAAGGTcgaaatatatcaaaatTCGTCGAGGTTATTGAGGTCCCTCCAAAAGATGATGGTAGCTTAGAAATGGCAGAAGTGGAGTGGCTGGATGAAGATACTGGACTCATGGTTAACATTTTGAGAGTAGTCGAGAAAGAAGAATTTGACATTGAAGAAGGTGAATACATCAGTCCCAATGAAAGCTATGAAAGTtctttatcaaataaactgCTTgatcatgcatattttgaaaatcaaaatgatGACGGAAACGCGTCTGACTCTGATTCAGACAGCGGAGTATGGATTGTTCAATCCGGTGACGTATGGCTCGAGGGTCAAGATGTGGAGGTGCCGCTTGACAGCGATCAGAATCCGTCAGTCGAAGATCCAGAAGTTGTCCAAGAAGAATTGCAGAGCGTTATGATTGCTCCAAGAATGCATCAGTGCCGAGATTGCAAAAAACGGTATACCACTGCTGAAAGAATGGCCCGACATGTTTGTCATTTCAAATTGGATAGTGACAATGGTCATTTTGAATCTAGCAACAAAATGGCGGGAGAAAATGGCAGTCATCATTGCCCATTTTGTGATTCTACATTTCACACTAAGATCAGACTGCAGTTTCATACGCGTCATTTTCATTTATCGAGTGCAAACACCGATGAAGGGGAATCAAGCACGCTTGCAGCGGGTACCCAATCTCTGCGATGTTCATTGTGTCCTAAGAAGATGTTTGAAAGCGAGGCAACTCTGTATGATCACATTCATTTTGCACATCCTCGAACTCGAAGGCATCTGTGCCCTGAAGAAGGCTGCGGAAAGGCGTTTCATCTCAAGGCAACGTTAAATAACCACATCAGATCTCACGCTGGAGAGCGAACCCACCGATGTGAAGTGTGTGGAAAGCAGTTCTTCGATAGGCAGACATTGGGGGAACACAGCGTCACACATCTCAAGGTAAAGCCATTCCAGTGCCACATCTGTCTGAAGTTCTTAAATAGGAAGTCACGTCTTCGAATGCATTTGTTGACTCACGAGTCAGAGCCGATTGGTGCCATGGTTATCACTTGTGGAAACTGCGACATGGCGTTCAAGGACACCGAACAAGCAGAGgCACATCTTAATGAGCTGGGCCAGTGCTGTGAATCTACTGAAATACAAAACCCTGACAGTCCGAGTTCTCTTCCAAAAACAACGGTGCCATCAAATGATGATACCATAAATACTATCGAAAATGTTGATAGTATGAAACCTAGAAGTAATCTCACCATGGATAAGAATAAAGCTGCAGATTTGTCACAAGAGGGCGGTGATCATTTGGAAACCCCAGATTCTTCCTTGCTTGACGGACTATCAGACATTGCCAAGAAGAGAATGACCGCAGTGAAGATTGATAAAGTTTACAGATGCGAGTATTGTGAAAaGGTTTACAGTGCTCAAGATGCATTGAATGTTCATCGATCCTGCCACGAGGGTTTGAAAAATCCTTTCATCTGTCACATATGCAGCGCTACTTTCTCCACTTACTCGAGgtgTACCACTCATAAAACAACCCATGGGTATTATAGAAACAAGTCTTCAAGGCGTAGTGAAGGATCGCTAGTCACAACCTCAAATCATGATCAATTTCCTGTTGTTAAACATTTTCTCTGCGAgGTTTGCGGTAAATCATATTTGCACTGGACCTATCTTCAAGTTCACAGAAGACAGAAGCATTCGGATAATGTTCACATGTACAAGTGCAGGTTATGCGGAGACGAATTCCCAAACAGttgGGGAATAGCTTATCATCGGAAGAAAGCTCACGGTCAAACTAGCGGCTCAGCGGCGCAGACAAGCACACCGATGCCTGCTATAGAAAAGTTCAACTATTCTTGTGCGGAATGCGGTGTGGTGGTAAAGAACAAAGCCCAACTTTTGGTGCACAAGCGATCATGTCATGCTGCGGCCAATGTGAATTCCAAGACTAATGCTAAACAAGGTCTTTACTCCTGCTTGGAGTGTGGAAAACGCTACATCACACAAGTCGGCCTCAAGGGACACATGAAgAGTCATCACGAGCCGGACTCTGGTGGAAGACCTCACCGATGTCAAGAATGCGGCAAGACGTTCGTACATGCTACAGGGCTGACAACACATGGaagGAGAGTCCACATGAAAGAGACAAACTTTGCTTGCTCAAACTGTGGCAAAACATTCTACAGCGCATGCGATCTGCAGAGTCATCTCAGGCGACACACTGGCGAGCGCCCCTTCCAATGTGATGTCTGCGGACATGCCTTCAGAACCAAGGGAATGAGGAATGAGCATCTCAGAATTCACACGGGAGAGCGTCCTTATCCATGCGACATATGCGGGCTGGCCTTCCGTAGGTCTTACGCTATGAAGAATCACCGCCTAATTCACACTGGAGAAAGAAGATACAGATGTTCCCTGTGTCCGAGAGCGTTCAGGGTTCGAGCGGACCTTAACACACACATTAGGCACAAGCACGGATCTGaacCTACAGAGTCTGATAGGCAGGCACCAGTAATGGTTGACAATATGCCGAATGAATTCACCGTAAATCACCAAGAAGAGATCCACATCAACCTTAATAGCATGGAGGCTGAAAATATCGAGAGCCTCGAAGGAAGAGTTGATCCCTCCGGAATAATCATATTCAACGAAGAAGGCGAGAGTATGCTACAAAACGAACAAGTTTTAAAATTGCAGAAGCCTAATAATATGGCAATCAAAACAATAAACTCTGATTATTCAAATAACCCTAAAACTAAAGGGTCACTGCGTAATAAAGAGATACTGAGTGATATTAATATGATGTTTGAAGATTCAGCAGATAACGTTTACGTGAATGATACGCAGGAGTCAATATTCTTGTCAGACGATGGAAGATTCGTGATCGATAATGATACAGAAATTATTGGTCAATTATCTGTCGACGGTAACAGTTTAATTGTCATGTCAAAAGATGGCGACaaaaaaattttaaacgttAACGATTTGCAAATAAATTCAGATGAGAATGTGCTGTTGAGGGGTGTCACTATCGAAACAGTCGATAGTTTCGTTGAAGATAATTATAATTCAGAAGATCTGTTGCCTGAAGGTGATTCGAAGTTTGTGAAGGTCTGGTCGGACGCAGAGGACAGCGAAAGCGGCCAGGTGGACGATGTTAATATGGAGGGATCCAAGTCTCCCGATGACGCTCGGCGGTTTAATGAATTGTTTTCTTCGTCGGTTGCCAATAATTga
Protein Sequence: MTLTLYLEDNYGKSTSIAVQPEDTFQVFLQNAKSILGYDVDISSITGTEQVLLNDNVYQFLIKAKLNLQEQEIKESSSELIAAGEIELPTQEESGLLDDDMQEDIIYILDDNTKENTSRLGFVDSFAPGTSSEFFLRNNIGDDSVSYIVYESEQQDECMYILGDEVINTTPEDATIVELENTFEPLLNEMSILKPINKNSIIDFNVRINESKNAALSDPSAVKTLNNKQLAGIIKDSCADNIEFEIVQTNKTDATPTTLTIHKQNINNNISINSQTLLQHNSNVATPKIVANVQENSQSFCTFCKRKITNEFSKSYIFDSDDTQLNKIFNKIEITIPKLICLYCLKSDYEVYDRLPKKLNTNDFLVMQNKLQKVYKKKAGGSHEKNIAKDKRLYTTGGAVNEKDSIDSFNGVTKNPPIIIISDIRIPKKECLNVGYVCRICGLDLKELRLAIPHSVTHMTEIKKPAVFSCILCTKSGYSQFQELRHHMQSEHSLMKQRMVQQNAKKTPKLNAIAHRKTKSERISDISVKNKGRNISKFVEVIEVPPKDDGSLEMAEVEWLDEDTGLMVNILRVVEKEEFDIEEGEYISPNESYESSLSNKLLDHAYFENQNDDGNASDSDSDSGVWIVQSGDVWLEGQDVEVPLDSDQNPSVEDPEVVQEELQSVMIAPRMHQCRDCKKRYTTAERMARHVCHFKLDSDNGHFESSNKMAGENGSHHCPFCDSTFHTKIRLQFHTRHFHLSSANTDEGESSTLAAGTQSLRCSLCPKKMFESEATLYDHIHFAHPRTRRHLCPEEGCGKAFHLKATLNNHIRSHAGERTHRCEVCGKQFFDRQTLGEHSVTHLKVKPFQCHICLKFLNRKSRLRMHLLTHESEPIGAMVITCGNCDMAFKDTEQAEAHLNELGQCCESTEIQNPDSPSSLPKTTVPSNDDTINTIENVDSMKPRSNLTMDKNKAADLSQEGGDHLETPDSSLLDGLSDIAKKRMTAVKIDKVYRCEYCEKVYSAQDALNVHRSCHEGLKNPFICHICSATFSTYSRCTTHKTTHGYYRNKSSRRSEGSLVTTSNHDQFPVVKHFLCEVCGKSYLHWTYLQVHRRQKHSDNVHMYKCRLCGDEFPNSWGIAYHRKKAHGQTSGSAAQTSTPMPAIEKFNYSCAECGVVVKNKAQLLVHKRSCHAAANVNSKTNAKQGLYSCLECGKRYITQVGLKGHMKSHHEPDSGGRPHRCQECGKTFVHATGLTTHGRRVHMKETNFACSNCGKTFYSACDLQSHLRRHTGERPFQCDVCGHAFRTKGMRNEHLRIHTGERPYPCDICGLAFRRSYAMKNHRLIHTGERRYRCSLCPRAFRVRADLNTHIRHKHGSEPTESDRQAPVMVDNMPNEFTVNHQEEIHINLNSMEAENIESLEGRVDPSGIIIFNEEGESMLQNEQVLKLQKPNNMAIKTINSDYSNNPKTKGSLRNKEILSDINMMFEDSADNVYVNDTQESIFLSDDGRFVIDNDTEIIGQLSVDGNSLIVMSKDGDKKILNVNDLQINSDENVLLRGVTIETVDSFVEDNYNSEDLLPEGDSKFVKVWSDAEDSESGQVDDVNMEGSKSPDDARRFNELFSSSVANN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00800391;
90% Identity: -
80% Identity: -