Basic Information

Insect: Himalopsyche anomala
Gene Symbol: -
Assembly: GCA_031772345.1
Location: CM062840.1:8847152-8875051[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 48 4.9 2.0 2 23 136 154 135 154 0.91

2 15 0.0015 0.069 13.9 2.1 1 23 159 181 159 181 0.94

3 15 9.6e-06 0.00046 20.8 1.9 1 23 187 209 187 209 0.95

4 15 1.6e-05 0.00077 20.0 0.3 1 23 215 237 215 237 0.97

5 15 2.3e-06 0.00011 22.7 0.6 1 23 243 265 243 265 0.99

6 15 4.4e-05 0.0021 18.7 1.9 1 23 271 293 271 293 0.98

7 15 0.00016 0.0075 16.9 0.1 1 20 299 320 299 323 0.93

8 15 0.0032 0.15 12.8 0.5 1 23 329 351 329 351 0.97

9 15 5.9e-07 2.8e-05 24.6 2.7 3 23 372 392 371 392 0.98

10 15 5.1e-07 2.4e-05 24.8 1.3 1 23 398 420 398 420 0.98

11 15 8.7e-05 0.0041 17.7 0.3 1 23 426 448 426 448 0.97

12 15 9e-05 0.0043 17.7 3.9 1 23 454 476 454 476 0.98

13 15 1.2e-05 0.00059 20.4 1.1 1 23 482 504 482 504 0.99

14 15 3.1e-05 0.0015 19.1 2.9 1 23 510 532 510 532 0.99

15 15 0.0043 0.2 12.4 0.3 1 22 538 559 538 559 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	48	4.9	2.0	2	23	136	154	135	154	0.91
2	15	0.0015	0.069	13.9	2.1	1	23	159	181	159	181	0.94
3	15	9.6e-06	0.00046	20.8	1.9	1	23	187	209	187	209	0.95
4	15	1.6e-05	0.00077	20.0	0.3	1	23	215	237	215	237	0.97
5	15	2.3e-06	0.00011	22.7	0.6	1	23	243	265	243	265	0.99
6	15	4.4e-05	0.0021	18.7	1.9	1	23	271	293	271	293	0.98
7	15	0.00016	0.0075	16.9	0.1	1	20	299	320	299	323	0.93
8	15	0.0032	0.15	12.8	0.5	1	23	329	351	329	351	0.97
9	15	5.9e-07	2.8e-05	24.6	2.7	3	23	372	392	371	392	0.98
10	15	5.1e-07	2.4e-05	24.8	1.3	1	23	398	420	398	420	0.98
11	15	8.7e-05	0.0041	17.7	0.3	1	23	426	448	426	448	0.97
12	15	9e-05	0.0043	17.7	3.9	1	23	454	476	454	476	0.98
13	15	1.2e-05	0.00059	20.4	1.1	1	23	482	504	482	504	0.99
14	15	3.1e-05	0.0015	19.1	2.9	1	23	510	532	510	532	0.99
15	15	0.0043	0.2	12.4	0.3	1	22	538	559	538	559	0.94

Sequence Information

Coding Sequence: ATGCCGGTTGGAATTTGTATTCAGTGCCTTGAAAATGCTAAACTCGCATTTTGCTTTAAAGAGCAGTGTCAGAAAGCAGACAATGTTTTGACAGAATATATAGAAATGataaGGATGAAAAATTCCTACAACACTGTAGATACCTATGATGAATTCGTCTTTCCTGATGTAAAAGTTGAACCATTTTTCGAGAAGCCTCTTGAAGAATTCACATCTAACATTGACAAAGATACTATTGCACCTGTAAATATTGAAGTCTTCGAAAACAACTTGACGGCGTCAGATGAAAATGATATCGGTGATGATTTTTTCGAGGAGGCAGAaagaaatattgacagtgaaaaagatcaaaatatttatactacaaATTTAGAGAACCGTGCAGAAGATGATGTTAAAAgAAATCAATGCACAGTGTGTAATAAAAAGGTGCGTAACATGCAACAGCACATGAAACGTCATACAGGACGCACACACATGTGTGAAGCATGCGGCAAGTCCTACCCGAATAGATGTGATCTCCGCAATCATCTGACGGCCCACTCCACTGACCGTCCATACAAATGCAATAAATGTCCAAAAGAGTTTACGCAGAAATACAAACTTAACCAACATGAGCTCGGGCATGAAGGCAAAAAAGCATTCATATGTGAACTCTGTGGAAAGGGattcAATCGCCGCAAAGAGTTGGCGTCCCACAACCGAGTCCACACTGGTTTGAAACCGTACCAATGTTCAATATGTGAGAAAAGCTTTGTGGGATCGTACACTCTCCTCAGGcatttgaaaatacatacaGGGGAAAAGGAGTACACGTGTGATCACTGCAGAAAGTCCTTCTCGGCTAAAGAGCCTTTGAAAGTTCACCTGAGACttcacactggagaaaaaccgtATTCTTGCCCAGAAGAAGGCTGCGATAGAAACTTTTCCACGGCTTATAGTCTCAAAATACATCAACCAGTTCACAGTGGTGTCAAgCCGTTCAGTTGCGCAACATGTGGGAAATTGTGTGCACGTATTGGAGACCTTCGTAAGCATGAAGCGACACACTTAAAAAGACACCTCGCAGAAGCTCTACCTCCTCCAGTCAAAGCTGATAAACATATCTTGTGCACTCACTGTGGTAAGTCTTTTGTTAGAAAAGCGGACTTGAAGCGGCATATATTTACACATACCCAAGAAAAACCGTTTAAGTGTCCTCAGTGCGATAAAGGATTTAACCAACAGTACGGACTCACTCAGCATTTGAGATATCATACAGgTTTGGCGTGTTTTGTATGCGACCTGtgcggaaaaggttttatgcgGAAGGCCACTATGGAGAAGCACAAACTCGTTCATTTAGGTATCAAGAGTCACAAGTGTGAATTTTGCAGTAAAGCATTCACGATCAGCGCCCACCTCATCAGGCATAGGCGAATACATACTGGTGAACGACCTTACGAGTGTGACGTATGCCACAAGACGTTCTCCGGCCGGTCGGGGTACGTGGTGCATCTCCGATCTCACACTGGGGAGAAGCCTTACCAATGTAAATTCTGCGATAAGACTTACACCACTTCCACTGCCATGAAGatTCATACTCGTAATCATACCGGGGAAAAGCCCTACATCTGTCCAAAGTGTTCTAATGCTTTTGCACGGTCTGATCTCCGATCTCATCACATGCGAGTTTGTTGTCCAAAGATAGTGGCTGAGCCAATCGCAGCACAACAGaTTCCTCATGGGTTCTACTTACAGCAGAAAGATAACGGTGTAAAATTTCAGTCACTATCAACACCATCCAAGTCTCAGTCAATACATCAATCGGCTAACGAATTGGATCCAACCACACAAGTACCTCTTCATTCAATAAGATTGGACAATGATGCGGGCGGCTTCACTACAACACTACTATCGACGGAAACAAGTTTTATAACTTCTGAGAGCCATCAACATGATATTATGATTCCAAATGATCAAGATGTCATTGCCTCGCTGCAAAACTATGACAAATAA
Protein Sequence: MPVGICIQCLENAKLAFCFKEQCQKADNVLTEYIEMIRMKNSYNTVDTYDEFVFPDVKVEPFFEKPLEEFTSNIDKDTIAPVNIEVFENNLTASDENDIGDDFFEEAERNIDSEKDQNIYTTNLENRAEDDVKRNQCTVCNKKVRNMQQHMKRHTGRTHMCEACGKSYPNRCDLRNHLTAHSTDRPYKCNKCPKEFTQKYKLNQHELGHEGKKAFICELCGKGFNRRKELASHNRVHTGLKPYQCSICEKSFVGSYTLLRHLKIHTGEKEYTCDHCRKSFSAKEPLKVHLRLHTGEKPYSCPEEGCDRNFSTAYSLKIHQPVHSGVKPFSCATCGKLCARIGDLRKHEATHLKRHLAEALPPPVKADKHILCTHCGKSFVRKADLKRHIFTHTQEKPFKCPQCDKGFNQQYGLTQHLRYHTGLACFVCDLCGKGFMRKATMEKHKLVHLGIKSHKCEFCSKAFTISAHLIRHRRIHTGERPYECDVCHKTFSGRSGYVVHLRSHTGEKPYQCKFCDKTYTTSTAMKIHTRNHTGEKPYICPKCSNAFARSDLRSHHMRVCCPKIVAEPIAAQQIPHGFYLQQKDNGVKFQSLSTPSKSQSIHQSANELDPTTQVPLHSIRLDNDAGGFTTTLLSTETSFITSESHQHDIMIPNDQDVIASLQNYDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -