Hano016994.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- -
- Assembly
- GCA_031772345.1
- Location
- CM062840.1:23279906-23290204[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0011 3.4 8.0 5.0 11 38 33 61 27 64 0.83 2 12 0.0016 4.9 7.5 3.2 6 34 57 85 56 89 0.74 3 12 0.0043 13 6.1 2.6 6 33 81 112 79 118 0.72 4 12 0.0059 18 5.7 4.2 5 38 112 145 108 146 0.78 5 12 0.00045 1.4 9.3 1.2 5 38 140 173 138 179 0.85 6 12 0.0059 18 5.7 5.7 13 38 175 201 168 207 0.80 7 12 0.0034 10 6.5 3.1 18 38 208 229 202 230 0.89 8 12 0.0004 1.2 9.4 5.9 5 38 224 257 224 259 0.87 9 12 0.024 73 3.8 4.1 6 30 253 276 252 283 0.74 10 12 7.1e-05 0.22 11.8 3.8 6 38 281 313 278 314 0.86 11 12 0.02 61 4.0 3.7 19 43 321 342 316 343 0.90 12 12 0.0029 9 6.7 1.1 18 41 409 429 397 430 0.87
Sequence Information
- Coding Sequence
- ATGGAACACGTAGATGTGAAGCCGATGCTGTTCGTAGATGGTGGTGTCGCCGCCAACGTTACCGCTGCCGATGCTGAATTTTTGCTGATACCGAAACCGAAATGCGAGACTCCTCACCACTGTCAGGTGTGCGGCAAGAAGTACACTCGCAAGGAGCACCTCGCCAACCACATGCGCTCGCATACTAATGACACCCCCTTCCGATGTGAGATCTGCGGAAAGTCCTTTACCAGAAAAGAGCACTTCACCAATCACATCATGTGGCACACTGGGGAGACTCCTCACCGCTGCGACTTTTGCGCAAAGACATTCACCCGCAAAGAGCATCTGTTGAATCATGTTCGCCAGCACACCGGAGAGTCACCCCACCGCTGCGGATACTGTTCCAAGTCTTTCACGAGACGGGAGCATCTTGTCAACCATGTGCGCCAGCACACCGGTGAGACGCCCTTTCGGTGCACCTATTGCCCCAAGGCCTTCACCAGGAAGGATCATCTCGTGAACCATGTCCGGCAGCACACTGGGGAATCTCCTCATAAGTGCACTTACTGTGCCAAGTCCTTCACCCGTAAAGAGCATCTGACTAATCACGTCCGTCAGCACACCGGGGAGTCGCCTCACCGATGCGCCTACTGCTCCAAATCTTTCACCAGGAAGGAGCATCTTACCAATCATGTCAGGAAACACACTGGCGAGACTCCTTACACGTGCAGCTACTGCTCCAAGGCCTTCAGCAGGAAGGAGCATCTGACCAATCATATCAGGAAACACACTGGAGAGACTCCTTACAGCTGCAGTTACTGCTCCAAGTCCTTCAGCAGGAAAGAGCACTTGAACAATCACGTCAGaatACACACGGGGGAGTCGCCCCACCGGTGCGAGCTGTGCCAGAAAACGTTCACCAGAAAGGAGCATCTCACTAATCATCTGCGTCAGCACACCGGAGACACTCCGCACTGCTGCAACGTGTGCAGCAAACCTTTCACTAGGAAAGAGCATCTCATCACACacatgagCCGATCCCACACTGGCGAGCGTCCGTTCGCATGCGAGGAGTGCGGAAAGTCGTTCCCGTTGAAGGGGAACCTCATCTTCCACCAGCGGTCGCACAACAAAGGGGCGCAGGCCGCCAGACCCTACCGCTGCGATCTCTGCCCCAAAGATTTCATGTGCAAAGGCCATCTGGTTTCCCACCGTCGTTCCCATACGGGCGAACGTCCTCACACGTGTCTGCAGTGCGGGAAGACTTTTGTGGAGAAAGGAAACATGGTGAGACACATGCGCAAACACGAGCTGGACGGCACTGCGGTGGCGGCGGCTACCGGAGTTGATCCCCTCAACCTGAACGCCGCCTCTGAAAGTGGAGTTCCCGCGCCTGAAGGTGTCCCGGTGGACTCTTCGCTTCCCGCTCCGCCGCCGTCCTCTCTCCCGCAGCAGTCTGGCGGTATTCCAGCAGTCTCCGTAGGCGGCCAGCAGCCTCCGCCTCTCATGCACATGACTGGACAGGTGATATCCGAAGCGGCGGGTTCGGCAGCACAGAGAGCCGCAGGAGCCCTGCATCATCCTGGACAGCAGCCCGCGATGCCGCATCATCCCGTCGTGGTCAACTATTAG
- Protein Sequence
- MEHVDVKPMLFVDGGVAANVTAADAEFLLIPKPKCETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRREHLVNHVRQHTGETPFRCTYCPKAFTRKDHLVNHVRQHTGESPHKCTYCAKSFTRKEHLTNHVRQHTGESPHRCAYCSKSFTRKEHLTNHVRKHTGETPYTCSYCSKAFSRKEHLTNHIRKHTGETPYSCSYCSKSFSRKEHLNNHVRIHTGESPHRCELCQKTFTRKEHLTNHLRQHTGDTPHCCNVCSKPFTRKEHLITHMSRSHTGERPFACEECGKSFPLKGNLIFHQRSHNKGAQAARPYRCDLCPKDFMCKGHLVSHRRSHTGERPHTCLQCGKTFVEKGNMVRHMRKHELDGTAVAAATGVDPLNLNAASESGVPAPEGVPVDSSLPAPPPSSLPQQSGGIPAVSVGGQQPPPLMHMTGQVISEAAGSAAQRAAGALHHPGQQPAMPHHPVVVNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00799436;
- 90% Identity
- iTF_00799436;
- 80% Identity
- iTF_00799436;