Hano013419.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- -
- Assembly
- GCA_031772345.1
- Location
- CM062835.1:24599901-24606767[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.8e-11 1.4e-07 31.4 0.1 1 43 212 255 212 256 0.94
Sequence Information
- Coding Sequence
- ATGGTTTTCGAAGACGGcgaaatcaaaattgaaaaagccGAAGATCTCCTGATTGACTTCGACCTAAGCCGAGAAATAATCAACGGGGTCTGCAGGGGCTGCCTGGGCACCGATAACCTCAAAATCATGACAAAAACTTACAGACACGAAGGAAAAGAAGAGACTTACTCCGAGATGTTGGTGTATTGCTTCTCGATTAGGCTGGAAGAGCCCCAGGAGCGATGCGGTGCCAAGGAATATTTCATCTGCCACGCCTGCATAAAAAAGCTGAGAGCTGCCGTAGACTTCAGGAATCAATTGGAGACTGCGCATACTACTTTCAAATTTCTTCTAGAAAAGAAATCGGAACCGAACGAATACTGCGAGAGCTTCGATCCCGGTTCCGCCTTCGAGCCTACGGATTCCGGTCGGGAAGGCGATGACAATCCGGATGGCGATCCTGACTTCGAGCCGACTGTTAAGAAAAAATTGAAACGTACCAAAGCGGAGAGCAAGAGGAAAAAAAGATCTCGCAGAGCATCCGGACAGCCCAAGAATCGCGAGACTCAATCTGATTCCACTGCAATAGCAGAGTATAATAAgttaaatttgaaaatgtgcGACGTCGACGCCCGTTTGAATCGATCACTGTGGACGAGGGACGATATGAAAAGCGCGGTAAAAATGGCTCTCAGCACCAAGCTGTCTCTGCGAAAGATAGCTCACGCGTACGGCTTGCCCAGGACCACCCTATCCGGGAAAGTCAAGCGAGCTAGGGAAGGCAAAAAAGTGGACTTCTTTCCGAAGAGAGGAGTCTACATGAACGACTTCATCGAAGATTTTGAAGAAAAGCTGGCCCGACAGATCGAAGAGCTTCCGAAAGAGAGTCTACCTCTGCTGAAAAATGGCTTTCTTAAGATGGCGAGAGATCTAGTCAAGACGTGTGACGTTCATCCTGATTTCGACATCAACACCGATGCATCTGgaagttattttcattttgttttcttgAAGCGACATCCATCTCTGAAAGAAAAGACGAAAAGAGAAAATTACTATGAATATGACGAAAATGGCGTacgattgaagaaaaaaaaccctCCCCCTTTCGAGATAAAGCCTGCCGACCTCAAGTGCAAAATCTGCGGCGAAGAATTCCTGTGGAATTCGATGCTGAGAACTCACATGTCGGTCCATTATCCCAGGTTCGTGTGTCAGACGTGTGGGCACTTGTCGGCCACGAGAAAGCAGTTCCACTACCACAGCGGTACGCACAAAGAGAAAAACTTTGTTTGCAAATTTTGCCCcgacaaaagatacaaaaacaGCACTTCTCTGAGGGCGCACACTAGAACCATTCACTTGGGCGACAGAAATCTATACAGATGTCCCATATGTTTCGAGCACATGAAGAGTTTCGCATGGAGGCGAAAACACCTGATGGAGGTGCACAATCAGAATGTGAGAAAATATCCCTGCAAGCGGTGCGACAAGGTGTTTGAAGCGGCCGGAACGCTCTCCAAGCACGTGCGGCAGGTGCACCTAAACGAGCGGAATCATATCTGTGACGTCTGCGCCGAGTCTTTCTACGAAAAAAGAAGCCTGGTCAGGCACATGAGGGCGCACACTTTCTGA
- Protein Sequence
- MVFEDGEIKIEKAEDLLIDFDLSREIINGVCRGCLGTDNLKIMTKTYRHEGKEETYSEMLVYCFSIRLEEPQERCGAKEYFICHACIKKLRAAVDFRNQLETAHTTFKFLLEKKSEPNEYCESFDPGSAFEPTDSGREGDDNPDGDPDFEPTVKKKLKRTKAESKRKKRSRRASGQPKNRETQSDSTAIAEYNKLNLKMCDVDARLNRSLWTRDDMKSAVKMALSTKLSLRKIAHAYGLPRTTLSGKVKRAREGKKVDFFPKRGVYMNDFIEDFEEKLARQIEELPKESLPLLKNGFLKMARDLVKTCDVHPDFDINTDASGSYFHFVFLKRHPSLKEKTKRENYYEYDENGVRLKKKNPPPFEIKPADLKCKICGEEFLWNSMLRTHMSVHYPRFVCQTCGHLSATRKQFHYHSGTHKEKNFVCKFCPDKRYKNSTSLRAHTRTIHLGDRNLYRCPICFEHMKSFAWRRKHLMEVHNQNVRKYPCKRCDKVFEAAGTLSKHVRQVHLNERNHICDVCAESFYEKRSLVRHMRAHTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00799782;
- 90% Identity
- iTF_00799782; iTF_00800120; iTF_00800628;
- 80% Identity
- iTF_00799782;