Hano013418.1
Basic Information
- Insect
- Himalopsyche anomala
- Gene Symbol
- -
- Assembly
- GCA_031772345.1
- Location
- CM062835.1:24592638-24597524[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.3e-14 5.9e-11 42.2 0.1 2 35 118 152 117 159 0.93
Sequence Information
- Coding Sequence
- ATGTGCATCGAAAAACTCAGAGATGCGGCAGAGTTCAGAAATCAACTGGAAACGGCTGCGAGTAGATTCCAAAGCCTCTCAGAAGAGAAAGTGATTTCGTGCAACAATGTGGGGTACATCATCACAGGGGGGTCACCGGAAAGCAATGGTTTTCTCGATAACGATGACATTTTGGGAGATGACACGACTGATGCTCATTTTAAACGAAGGCCAAAGAGAAAATCTAAAATTTCTAGAAAAAAAGAGACCAAAAAGCGTGATGAAAAAGAAGACTTCGAGTATATTGATAACATgcCGCTGTCCGCCATTTCAGCGAATTCAGATTCTCGAGTCGAGAACGCCCCTTGGTCGAGGGAGACTATGAAAGCGGCCGTCGATACTGTCTTATCCGGAGACATGTCGGCGAGAAAGGCCGCCGCCGAATACGGCATACCGAGGAGTTCACTCCTGCGTAAGGTCACCATGATGCGAGGCGGCAAAAAGGTGAACTTTTCCCCCGTGATCGGGCTCTTCACGAATACTTTCACTCGGGAGTATGAGACCAGACTGGTGCAAGAGATCGTGGATCTGTCAAAGCGGCGCGTGTCCCTGAACAGGAAAGAGTTCCTGTGCGTGGCCAGACGTCTGGCTGAATCTCTGCGGATCGACGATAAGTTCAAAATCAAAACGGAGTCAGCCGGAACGAgcttctattattattttatgaaacgtCATCCAGTATTAAGACAAAAGTCACAGAAGCAACTTTTTAGCGGCAATATGAACGGCATCAAAACATTAGAAGAAGCGCTGCAATTTCACAAAGATGAAATGGGAGCCAAAAAGAAAGTCAGGAAGAAAGCAAATTTACCTGAAAAAATCAGTGACACCGACCTGCAGTGCAAGATCTGCAATGTAGAGTTTCTGTGGAATAAAAACCTCAAAATGCATATGTCGGTGCATTATCCTAATCATGTCTGCGAGACATGCGGGCATCTGTCCGCCACGCGCAAGCAGCTCTCCCATCACGCCTATTCCCACCGACTGGCAACCTTCTCTTGTCCACTGTGTCCCGACTCTAAATTCAAGACGTCCAACGCCCTGCAGGCGCACACTAAGTTAAAACACCTCGGCGAGAACGACCGCTACAAATGCCCCGTGTGCGGTGAACGCTTCACGAGTTTCACCCGCCGCCGGAAACATCTAATCGACGCCCACGACCACCAGGAGAGGAAGTACGCGTGCAAGCTGTGCGAGAAAGAGTTCGAGGCGGCCGGCACCCTGTCTGTCCACGTGCGGATCGTGCATTTGAAGGAGCGCAACCACCGCTGTCCCCAGTGCGAGCGGTCCTTTTTCTCCAAGAGGTGCCTGGCCAATCATGCGCTGTCGCACTCCGCTGAGAGAAATTTCCCGTGCGATGTCTGTGGGAAGCGCTTCAAAAGGAAAACGGCTCTCTCCGAGCATGCCAAGATCCACGCAGGGGACAAGAGACACGTCTGTAACGTGTGCGGCAGGGCTTTCACCCAGGCCTGTACGCTCCGCGGTCACATGGCCATACATGAGCGAGAAGTGAAACTTCACGATAAAAACTCTATTCAGCACTGA
- Protein Sequence
- MCIEKLRDAAEFRNQLETAASRFQSLSEEKVISCNNVGYIITGGSPESNGFLDNDDILGDDTTDAHFKRRPKRKSKISRKKETKKRDEKEDFEYIDNMPLSAISANSDSRVENAPWSRETMKAAVDTVLSGDMSARKAAAEYGIPRSSLLRKVTMMRGGKKVNFSPVIGLFTNTFTREYETRLVQEIVDLSKRRVSLNRKEFLCVARRLAESLRIDDKFKIKTESAGTSFYYYFMKRHPVLRQKSQKQLFSGNMNGIKTLEEALQFHKDEMGAKKKVRKKANLPEKISDTDLQCKICNVEFLWNKNLKMHMSVHYPNHVCETCGHLSATRKQLSHHAYSHRLATFSCPLCPDSKFKTSNALQAHTKLKHLGENDRYKCPVCGERFTSFTRRRKHLIDAHDHQERKYACKLCEKEFEAAGTLSVHVRIVHLKERNHRCPQCERSFFSKRCLANHALSHSAERNFPCDVCGKRFKRKTALSEHAKIHAGDKRHVCNVCGRAFTQACTLRGHMAIHEREVKLHDKNSIQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00800495;
- 90% Identity
- iTF_00799647;
- 80% Identity
- iTF_00799647;